| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901288
Identifier: 159901288
GI number: 159901288
Start: 6092498
End: 6093388
Strand: Reverse
Name: 159901288
Synonym: Haur_4776
Alternate gene names: NA
Gene position: 6093388-6092498 (Counterclockwise)
Preceding gene: 159901289
Following gene: 159901287
Centisome position: 96.01
GC content: 54.21
Gene sequence:
>891_bases ATGTTAAGTCGCTCAGGCAACGCCCAACGGGCAACCAAGCTGATCGTTTGGCTGGCATGTTTTGTGGTTGTGCTGTTATT GCTCGATCAACAGGGGATTCTTACGCCAGTTACCGACAGTACGGCTCGCGTTTTGACTCCAGTTACCCGCACGCTGACGA ATATTCGTTTAGCGATTAGCGATACCTTCGGCGGTATTTTTGGCTCGTCGCAAGCCGCCCAAGATTTGGCAGCCTTGCAA GAACGGGTCACCGAACTTGAAAACGAAAATGTCCAATTGCGCAGCGCTGCCGCTGAAAACACAACCTTGCGCCGCACTGC TGGCATGCGCGAACGCTATGGCTGGCGCACGGTGATTGGCAATGTGGTCAGTCGCTCCGCCGATGCTGGCAATCGGGTGA TAAGCATCGATCGTGGTACGGTTGATGGCTTGGCCGTGGGCATGCCTGTGGTTTCACACGTCAATGGCAGCCCCGATGCG CTAATTGGCTTGGTCGATACGGTCAGCCAACATAATGCCACAGTTTTGCTCATTACCGATGCGCGTTCGGTGGTGAGCGG CCAGGTGTTATCGCAGGTAACCAGCGAACAAGAAAGCGGTAGCATCAGCCAACCAATGGGCGATGTGCTTGGTCAATGGC AACTTGGCTCACGCTTGATTATGCGCCATATCGATCGTGACGCTAAATTCAGCGTTGGCGACGATGTGTTGACCGCTGGT ATTAGCAAAGCATTGGCCTTCGATGCACCTGCTGCACGGATTCCGCCCGATGTGCCGATTGGCCGTGTCAGCGCAATTCG CCCCGACGGCCACGGCCAACAAGCCGATATTGAACCATATTTTGATCCTGATGTAGTGCGGACTGTATGGATTATCGTCG GCGAAGATTAA
Upstream 100 bases:
>100_bases GTGTGGCACGCGGCACAGGCAAAATGATCGAGGAATTTGATAAATACCGTGACACGATTCGGCGTTCGCAAGAATCGCGT CGCATCAAACGTGGGTAGTC
Downstream 100 bases:
>100_bases GCGAACGGCTGCGCGGACAGCTTTGGTTGGCCCTGATCGTTGGATTAACCGTGATTATTCAGACAACGCTCTTGCCAACG ATCTTTAATGCCCACTTAAA
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: Rod Shape-Determining Protein Mrec
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MLSRSGNAQRATKLIVWLACFVVVLLLLDQQGILTPVTDSTARVLTPVTRTLTNIRLAISDTFGGIFGSSQAAQDLAALQ ERVTELENENVQLRSAAAENTTLRRTAGMRERYGWRTVIGNVVSRSADAGNRVISIDRGTVDGLAVGMPVVSHVNGSPDA LIGLVDTVSQHNATVLLITDARSVVSGQVLSQVTSEQESGSISQPMGDVLGQWQLGSRLIMRHIDRDAKFSVGDDVLTAG ISKALAFDAPAARIPPDVPIGRVSAIRPDGHGQQADIEPYFDPDVVRTVWIIVGED
Sequences:
>Translated_296_residues MLSRSGNAQRATKLIVWLACFVVVLLLLDQQGILTPVTDSTARVLTPVTRTLTNIRLAISDTFGGIFGSSQAAQDLAALQ ERVTELENENVQLRSAAAENTTLRRTAGMRERYGWRTVIGNVVSRSADAGNRVISIDRGTVDGLAVGMPVVSHVNGSPDA LIGLVDTVSQHNATVLLITDARSVVSGQVLSQVTSEQESGSISQPMGDVLGQWQLGSRLIMRHIDRDAKFSVGDDVLTAG ISKALAFDAPAARIPPDVPIGRVSAIRPDGHGQQADIEPYFDPDVVRTVWIIVGED >Mature_296_residues MLSRSGNAQRATKLIVWLACFVVVLLLLDQQGILTPVTDSTARVLTPVTRTLTNIRLAISDTFGGIFGSSQAAQDLAALQ ERVTELENENVQLRSAAAENTTLRRTAGMRERYGWRTVIGNVVSRSADAGNRVISIDRGTVDGLAVGMPVVSHVNGSPDA LIGLVDTVSQHNATVLLITDARSVVSGQVLSQVTSEQESGSISQPMGDVLGQWQLGSRLIMRHIDRDAKFSVGDDVLTAG ISKALAFDAPAARIPPDVPIGRVSAIRPDGHGQQADIEPYFDPDVVRTVWIIVGED
Specific function: Unknown
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31641; Mature: 31641
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRSGNAQRATKLIVWLACFVVVLLLLDQQGILTPVTDSTARVLTPVTRTLTNIRLAIS CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHEEEEEE DTFGGIFGSSQAAQDLAALQERVTELENENVQLRSAAAENTTLRRTAGMRERYGWRTVIG CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCHHHHCCHHHHHH NVVSRSADAGNRVISIDRGTVDGLAVGMPVVSHVNGSPDALIGLVDTVSQHNATVLLITD HHHHCCCCCCCEEEEECCCCCCHHHHCCHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEC ARSVVSGQVLSQVTSEQESGSISQPMGDVLGQWQLGSRLIMRHIDRDAKFSVGDDVLTAG CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH ISKALAFDAPAARIPPDVPIGRVSAIRPDGHGQQADIEPYFDPDVVRTVWIIVGED HHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHEEEEEEEEECC >Mature Secondary Structure MLSRSGNAQRATKLIVWLACFVVVLLLLDQQGILTPVTDSTARVLTPVTRTLTNIRLAIS CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHEEEEEE DTFGGIFGSSQAAQDLAALQERVTELENENVQLRSAAAENTTLRRTAGMRERYGWRTVIG CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCHHHHCCHHHHHH NVVSRSADAGNRVISIDRGTVDGLAVGMPVVSHVNGSPDALIGLVDTVSQHNATVLLITD HHHHCCCCCCCEEEEECCCCCCHHHHCCHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEC ARSVVSGQVLSQVTSEQESGSISQPMGDVLGQWQLGSRLIMRHIDRDAKFSVGDDVLTAG CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHH ISKALAFDAPAARIPPDVPIGRVSAIRPDGHGQQADIEPYFDPDVVRTVWIIVGED HHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA