| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901287
Identifier: 159901287
GI number: 159901287
Start: 6092013
End: 6092522
Strand: Reverse
Name: 159901287
Synonym: Haur_4775
Alternate gene names: NA
Gene position: 6092522-6092013 (Counterclockwise)
Preceding gene: 159901288
Following gene: 159901286
Centisome position: 96.0
GC content: 52.35
Gene sequence:
>510_bases ATGGATTATCGTCGGCGAAGATTAAGCGAACGGCTGCGCGGACAGCTTTGGTTGGCCCTGATCGTTGGATTAACCGTGAT TATTCAGACAACGCTCTTGCCAACGATCTTTAATGCCCACTTAAATTTGGTGTTGTTGGCGGTGGTTTGTTGGACCTTGC TAGCCGATGCCGCTAAGGGTGCTGCCATCGCTATGTATGGTGGCTTGCTGATTGATGTGGTGGGCTACTCGCCGTTTGGC AGCCATGCCTTGGCTTTATTGCTGGTTACGTGGGTTTGTAGCCTTGCTGCCGAGCGCTTCCCACCCGATACATGGCCAAC GTCGCTCTTACTAACCATCGGCTTGACCCCGCTATATCACTTAGTTACCCAAGTGTTTCGCGGTGGCACCGACGATTGGC TGAGTTGGGCGATTGTGGTGCTTGTGCCAGCCATGATTATCAATGCGATTGCGGTTTTGCCAACCTTCCTCGTTTTGCAA TGGTGGAACGAGCGCAAAATCCGCCACTAA
Upstream 100 bases:
>100_bases CCGATGTGCCGATTGGCCGTGTCAGCGCAATTCGCCCCGACGGCCACGGCCAACAAGCCGATATTGAACCATATTTTGAT CCTGATGTAGTGCGGACTGT
Downstream 100 bases:
>100_bases ACTTTATCATCAAGGAGAACCCTATGCGCGGTCGCTTGATCGGCTTACGGGTCGTGAGCTTAATTATTTTTGTGGTCTTG CTCGCGCGATTGCAGCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MDYRRRRLSERLRGQLWLALIVGLTVIIQTTLLPTIFNAHLNLVLLAVVCWTLLADAAKGAAIAMYGGLLIDVVGYSPFG SHALALLLVTWVCSLAAERFPPDTWPTSLLLTIGLTPLYHLVTQVFRGGTDDWLSWAIVVLVPAMIINAIAVLPTFLVLQ WWNERKIRH
Sequences:
>Translated_169_residues MDYRRRRLSERLRGQLWLALIVGLTVIIQTTLLPTIFNAHLNLVLLAVVCWTLLADAAKGAAIAMYGGLLIDVVGYSPFG SHALALLLVTWVCSLAAERFPPDTWPTSLLLTIGLTPLYHLVTQVFRGGTDDWLSWAIVVLVPAMIINAIAVLPTFLVLQ WWNERKIRH >Mature_169_residues MDYRRRRLSERLRGQLWLALIVGLTVIIQTTLLPTIFNAHLNLVLLAVVCWTLLADAAKGAAIAMYGGLLIDVVGYSPFG SHALALLLVTWVCSLAAERFPPDTWPTSLLLTIGLTPLYHLVTQVFRGGTDDWLSWAIVVLVPAMIINAIAVLPTFLVLQ WWNERKIRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18868; Mature: 18868
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYRRRRLSERLRGQLWLALIVGLTVIIQTTLLPTIFNAHLNLVLLAVVCWTLLADAAKG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AAIAMYGGLLIDVVGYSPFGSHALALLLVTWVCSLAAERFPPDTWPTSLLLTIGLTPLYH CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LVTQVFRGGTDDWLSWAIVVLVPAMIINAIAVLPTFLVLQWWNERKIRH HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MDYRRRRLSERLRGQLWLALIVGLTVIIQTTLLPTIFNAHLNLVLLAVVCWTLLADAAKG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC AAIAMYGGLLIDVVGYSPFGSHALALLLVTWVCSLAAERFPPDTWPTSLLLTIGLTPLYH CHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH LVTQVFRGGTDDWLSWAIVVLVPAMIINAIAVLPTFLVLQWWNERKIRH HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA