Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159901245

Identifier: 159901245

GI number: 159901245

Start: 6043952

End: 6044395

Strand: Reverse

Name: 159901245

Synonym: Haur_4733

Alternate gene names: NA

Gene position: 6044395-6043952 (Counterclockwise)

Preceding gene: 159901246

Following gene: 159901244

Centisome position: 95.24

GC content: 47.52

Gene sequence:

>444_bases
ATGGCTACACTACGACATACCCGTTATCAAGTGGCAATTATGGATCATGATTGCTTACTCCTCATTCGCTTTGCCTCTGC
AACTACAACGTTTTGGCTTTTGCCCGGTGGCGGACGCGAACCAGATGAAAGTGAAAACGATTGCCTCATTCGTGAAGCAT
GGGAAGAACTTGGCGTGCGTATTGTGGTTGAAGGGCTGATTCTGCACCAGCAGGATCAGCCCGACCAAACCTATCAGGCG
TTTAAAACCTATCGCTGCCGAATAATCGAAGGTACACCCCAGCCTGGCTATGAAACAATCAACCCAAATGATCCTAGTGC
CGGAATTGTGGAAGTTGGCTGGGTTGACTTAACCGCCCCTGAGACTTGGCCAGCATTAATTGTTAACAATTTATATACTT
TTAAGCTCCTCCAGCAACTTCGTCAAAGCCTTGGCTATGTCTAG

Upstream 100 bases:

>100_bases
CCAACAAGCCGACACCTGGCGCTTGAACAGTGGTTATTTGCAAGCAAGCGGCCCAGCCACAGTGCTGATTCAAACACTGA
CTCAAGGCTGTGATATTTAA

Downstream 100 bases:

>100_bases
AACATGGTAGCCACAATCAGTGGCCTAGGAGGCATTTTAGCCCTTTAGATTGGCCTACGTATTCGCTCGCTCAAGCTAGC
TAGCAGTCTAGGTGCTGAGT

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MATLRHTRYQVAIMDHDCLLLIRFASATTTFWLLPGGGREPDESENDCLIREAWEELGVRIVVEGLILHQQDQPDQTYQA
FKTYRCRIIEGTPQPGYETINPNDPSAGIVEVGWVDLTAPETWPALIVNNLYTFKLLQQLRQSLGYV

Sequences:

>Translated_147_residues
MATLRHTRYQVAIMDHDCLLLIRFASATTTFWLLPGGGREPDESENDCLIREAWEELGVRIVVEGLILHQQDQPDQTYQA
FKTYRCRIIEGTPQPGYETINPNDPSAGIVEVGWVDLTAPETWPALIVNNLYTFKLLQQLRQSLGYV
>Mature_146_residues
ATLRHTRYQVAIMDHDCLLLIRFASATTTFWLLPGGGREPDESENDCLIREAWEELGVRIVVEGLILHQQDQPDQTYQAF
KTYRCRIIEGTPQPGYETINPNDPSAGIVEVGWVDLTAPETWPALIVNNLYTFKLLQQLRQSLGYV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16762; Mature: 16631

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS00893 NUDIX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLRHTRYQVAIMDHDCLLLIRFASATTTFWLLPGGGREPDESENDCLIREAWEELGVR
CCCCCCCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCEE
IVVEGLILHQQDQPDQTYQAFKTYRCRIIEGTPQPGYETINPNDPSAGIVEVGWVDLTAP
EEEEEHEECCCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCC
ETWPALIVNNLYTFKLLQQLRQSLGYV
CCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ATLRHTRYQVAIMDHDCLLLIRFASATTTFWLLPGGGREPDESENDCLIREAWEELGVR
CCCCCCEEEEEEECCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCEE
IVVEGLILHQQDQPDQTYQAFKTYRCRIIEGTPQPGYETINPNDPSAGIVEVGWVDLTAP
EEEEEHEECCCCCCHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCC
ETWPALIVNNLYTFKLLQQLRQSLGYV
CCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA