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The map label for this gene is rbsA1 [H]

Identifier: 159901220

GI number: 159901220

Start: 6014131

End: 6015702

Strand: Direct

Name: rbsA1 [H]

Synonym: Haur_4708

Alternate gene names: 159901220

Gene position: 6014131-6015702 (Clockwise)

Preceding gene: 159901219

Following gene: 159901224

Centisome position: 94.76

GC content: 53.75

Gene sequence:

>1572_bases
ATGTTTACCTGCCGCCATATTTCCAAGCAATTTGGTACGCTGCCCGTGATCGATGAGGTCAGCTTTGATCTTGCGCCTGG
CGAGGTGGTGGGCTTGACTGGCCAAAGTGGTGCTGGTAAATCGGTATTGGTGCGTTTATTGGCGGGCTTGGAAAAACCCG
ATACTGGGGTGATTTCGACCCGTGGCCAATTAATTAACTCGACCCAAAGTGCCTTTCGGGCTGGGTTGGCGGTCATCCAT
CAGCAGCCAGTGCTAGTTGAGCATTTGGATGTGGCGAGTGCGATTTTTTTGGGTCACGAGGTTGGGCGCGGTTGGCTGGG
TTGGTTATCGTTGCCCAATCAGCGCCATCACGACACCATGGCGCGGCAAATTCTAGCCCAACTTGGTTTAGAGTTGCCAT
CGTTGCGCACCTTAGTTCGTAATTTATCGAGCGAACAACGCCAGATGTTGGCGATTGCGCAGGTGCTGATCCGCAAGCCG
CAAGTTGTGATTATCGATGAGCCAACGCCGCTACTGCGCTACGAATATCAACAAACGCTGCTCGAATTGATTCGCGAATG
GCAAGCGCAAGGTGTGGCGGTGCTGTTTAGCAGCCAAAATCTTGATCATCTATTTGCAGTGAGCAATCGGATTTTGGTGT
TGCGGCGCGGGCGCTTTGTGTTCGAGGCGGCCACCGAAAAAACCTCGCGTGAGGAAGTGGTGCGGGCACAAATTGGAGCG
CGAGATCAGCAACATCTCACACCAATTATTTGGGCCTTGGAAAATTACCATCGTGCCAGCCAACAAGCCGAGGCCTTGCG
CCAAAGCCAATCCAGCCTAGAGCACGATTTAGCTAGCCAGAATCAGCTTAATCGCCAATTGATTGGCCAACTCGATCAAC
AGGTCAGTAATCTTGATCGCGCCAATGCGGCCTTGCAAGAAGCCCAACGTCGTTTGCTTTCCGAGCGCGAAGGTGAGCGC
AAAGTGCTTGCCCGCGAGCTGCACGACCAAGTTATTCAAGATTTGGTGAGCCTCAATTATGATATTGATAATTTGCGCAG
CCAAATTGACGACCCTGAGCAAGCCAGCCTTGGGCTTGACGATTTGCGCGATAACATTCGCCAATTGGTGAGCACAGTAC
GGGCAATTTGTGGTAACTTGCGCCCGCCAACCATCGATAGCCTTGGGGTCAATGCGGCAATTCAATCGTTTGTGCGCGAT
TGGAGCAGCCGCAGCGGCATTGAAGTGCAGCTTGATCTCGACGACGATTTAGAGCGCTTGCCCGAAATGCTCGAAATTTC
GGCCTTTCGCATGATTCAAGAGGGCTTGAGCAATGTGCGTAAACATGCCCAAGCCACCAAAGTTGGCATTAGCCTGCGTA
CCACCGCCCGCCGCACTCTGCTCCTGACGATTGCCGACAACGGGCGCGGCTTGCAAGCTGAGATTAATTTGGCGGCGCTG
GCGAATGCAGGCCACTATGGGTTGCTGGGCATGAGCGAACGGGTGGCGCTGGTTGGCGGGCGTTTCCGCGTGCACAATCG
GGCTGGCGGCGGTCTCATCCTCGAAATCGAAATTCCCTACCAACCACTTTAA

Upstream 100 bases:

>100_bases
GGTCGAAATTCCATTAATGGTTAAATAGGTTTTTCGGCGAACGCTATGGATGCTTGGTCGTCCATAGCGTTTGTATTTAA
GCAACGAATGGCTGTGTGCG

Downstream 100 bases:

>100_bases
CTAATCGCGATAGCCTTGATCGATCGGCAAATTGGGCTGATGGGCTGCCTGCACCGCCAAGCGATCGCAACGCTCGTTAT
CCTTGACTCCAGCGTGGCCA

Product: histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MFTCRHISKQFGTLPVIDEVSFDLAPGEVVGLTGQSGAGKSVLVRLLAGLEKPDTGVISTRGQLINSTQSAFRAGLAVIH
QQPVLVEHLDVASAIFLGHEVGRGWLGWLSLPNQRHHDTMARQILAQLGLELPSLRTLVRNLSSEQRQMLAIAQVLIRKP
QVVIIDEPTPLLRYEYQQTLLELIREWQAQGVAVLFSSQNLDHLFAVSNRILVLRRGRFVFEAATEKTSREEVVRAQIGA
RDQQHLTPIIWALENYHRASQQAEALRQSQSSLEHDLASQNQLNRQLIGQLDQQVSNLDRANAALQEAQRRLLSEREGER
KVLARELHDQVIQDLVSLNYDIDNLRSQIDDPEQASLGLDDLRDNIRQLVSTVRAICGNLRPPTIDSLGVNAAIQSFVRD
WSSRSGIEVQLDLDDDLERLPEMLEISAFRMIQEGLSNVRKHAQATKVGISLRTTARRTLLLTIADNGRGLQAEINLAAL
ANAGHYGLLGMSERVALVGGRFRVHNRAGGGLILEIEIPYQPL

Sequences:

>Translated_523_residues
MFTCRHISKQFGTLPVIDEVSFDLAPGEVVGLTGQSGAGKSVLVRLLAGLEKPDTGVISTRGQLINSTQSAFRAGLAVIH
QQPVLVEHLDVASAIFLGHEVGRGWLGWLSLPNQRHHDTMARQILAQLGLELPSLRTLVRNLSSEQRQMLAIAQVLIRKP
QVVIIDEPTPLLRYEYQQTLLELIREWQAQGVAVLFSSQNLDHLFAVSNRILVLRRGRFVFEAATEKTSREEVVRAQIGA
RDQQHLTPIIWALENYHRASQQAEALRQSQSSLEHDLASQNQLNRQLIGQLDQQVSNLDRANAALQEAQRRLLSEREGER
KVLARELHDQVIQDLVSLNYDIDNLRSQIDDPEQASLGLDDLRDNIRQLVSTVRAICGNLRPPTIDSLGVNAAIQSFVRD
WSSRSGIEVQLDLDDDLERLPEMLEISAFRMIQEGLSNVRKHAQATKVGISLRTTARRTLLLTIADNGRGLQAEINLAAL
ANAGHYGLLGMSERVALVGGRFRVHNRAGGGLILEIEIPYQPL
>Mature_523_residues
MFTCRHISKQFGTLPVIDEVSFDLAPGEVVGLTGQSGAGKSVLVRLLAGLEKPDTGVISTRGQLINSTQSAFRAGLAVIH
QQPVLVEHLDVASAIFLGHEVGRGWLGWLSLPNQRHHDTMARQILAQLGLELPSLRTLVRNLSSEQRQMLAIAQVLIRKP
QVVIIDEPTPLLRYEYQQTLLELIREWQAQGVAVLFSSQNLDHLFAVSNRILVLRRGRFVFEAATEKTSREEVVRAQIGA
RDQQHLTPIIWALENYHRASQQAEALRQSQSSLEHDLASQNQLNRQLIGQLDQQVSNLDRANAALQEAQRRLLSEREGER
KVLARELHDQVIQDLVSLNYDIDNLRSQIDDPEQASLGLDDLRDNIRQLVSTVRAICGNLRPPTIDSLGVNAAIQSFVRD
WSSRSGIEVQLDLDDDLERLPEMLEISAFRMIQEGLSNVRKHAQATKVGISLRTTARRTLLLTIADNGRGLQAEINLAAL
ANAGHYGLLGMSERVALVGGRFRVHNRAGGGLILEIEIPYQPL

Specific function: Part of the ABC transporter complex RbsABCD involved in ribose import. Responsible for energy coupling to the transport system [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI21536376, Length=203, Percent_Identity=25.1231527093596, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI31657092, Length=215, Percent_Identity=24.1860465116279, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI27436953, Length=222, Percent_Identity=26.5765765765766, Blast_Score=71, Evalue=3e-12,
Organism=Escherichia coli, GI1789991, Length=248, Percent_Identity=32.258064516129, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI1790190, Length=241, Percent_Identity=30.7053941908714, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1788210, Length=241, Percent_Identity=32.7800829875519, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI48995001, Length=241, Percent_Identity=31.5352697095436, Blast_Score=119, Evalue=6e-28,
Organism=Escherichia coli, GI1788897, Length=248, Percent_Identity=33.0645161290323, Blast_Score=115, Evalue=9e-27,
Organism=Escherichia coli, GI1790525, Length=235, Percent_Identity=28.0851063829787, Blast_Score=112, Evalue=4e-26,
Organism=Escherichia coli, GI1787792, Length=249, Percent_Identity=27.3092369477912, Blast_Score=102, Evalue=8e-23,
Organism=Escherichia coli, GI87081709, Length=259, Percent_Identity=29.7297297297297, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1788472, Length=238, Percent_Identity=26.890756302521, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1787029, Length=226, Percent_Identity=28.3185840707965, Blast_Score=93, Evalue=4e-20,
Organism=Escherichia coli, GI1787712, Length=214, Percent_Identity=28.5046728971963, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI87081791, Length=240, Percent_Identity=27.5, Blast_Score=82, Evalue=7e-17,
Organism=Escherichia coli, GI1788225, Length=232, Percent_Identity=26.7241379310345, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1787474, Length=277, Percent_Identity=27.7978339350181, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1789873, Length=229, Percent_Identity=29.2576419213974, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1788761, Length=235, Percent_Identity=26.8085106382979, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1790544, Length=240, Percent_Identity=26.6666666666667, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI48994997, Length=236, Percent_Identity=25.4237288135593, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI87081782, Length=230, Percent_Identity=27.8260869565217, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI87081834, Length=237, Percent_Identity=28.2700421940928, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1786253, Length=229, Percent_Identity=29.2576419213974, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1789891, Length=210, Percent_Identity=30, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1790467, Length=215, Percent_Identity=28.8372093023256, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1790739, Length=249, Percent_Identity=27.3092369477912, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1789962, Length=222, Percent_Identity=27.9279279279279, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1787370, Length=219, Percent_Identity=26.9406392694064, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788506, Length=234, Percent_Identity=30.3418803418803, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1789672, Length=235, Percent_Identity=25.531914893617, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1789864, Length=250, Percent_Identity=26, Blast_Score=74, Evalue=3e-14,
Organism=Escherichia coli, GI1787500, Length=222, Percent_Identity=27.4774774774775, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI1786398, Length=240, Percent_Identity=26.6666666666667, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1787089, Length=221, Percent_Identity=27.6018099547511, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1786872, Length=223, Percent_Identity=26.9058295964126, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1786563, Length=221, Percent_Identity=27.1493212669683, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI1787758, Length=207, Percent_Identity=29.4685990338164, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI87082268, Length=242, Percent_Identity=25.2066115702479, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI87082267, Length=207, Percent_Identity=29.4685990338164, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1786345, Length=240, Percent_Identity=25.8333333333333, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1787164, Length=220, Percent_Identity=26.8181818181818, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1787547, Length=244, Percent_Identity=24.1803278688525, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786654, Length=228, Percent_Identity=28.9473684210526, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1788812, Length=230, Percent_Identity=26.5217391304348, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI1789032, Length=213, Percent_Identity=28.169014084507, Blast_Score=66, Evalue=7e-12,
Organism=Escherichia coli, GI145693107, Length=211, Percent_Identity=30.8056872037915, Blast_Score=65, Evalue=2e-11,
Organism=Escherichia coli, GI87082311, Length=215, Percent_Identity=32.093023255814, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1788644, Length=229, Percent_Identity=26.6375545851528, Blast_Score=63, Evalue=5e-11,
Organism=Escherichia coli, GI1788450, Length=227, Percent_Identity=25.9911894273128, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17511077, Length=234, Percent_Identity=25.6410256410256, Blast_Score=71, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71988343, Length=221, Percent_Identity=24.4343891402715, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24666092, Length=214, Percent_Identity=29.9065420560748, Blast_Score=80, Evalue=4e-15,
Organism=Drosophila melanogaster, GI161076682, Length=219, Percent_Identity=29.6803652968037, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI161076684, Length=215, Percent_Identity=29.7674418604651, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24581617, Length=215, Percent_Identity=29.7674418604651, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24581615, Length=215, Percent_Identity=29.7674418604651, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24648314, Length=218, Percent_Identity=23.394495412844, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI221512771, Length=214, Percent_Identity=22.4299065420561, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28574533, Length=226, Percent_Identity=28.7610619469027, Blast_Score=68, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015861
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: =3.6.3.17 [H]

Molecular weight: Translated: 58228; Mature: 58228

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTCRHISKQFGTLPVIDEVSFDLAPGEVVGLTGQSGAGKSVLVRLLAGLEKPDTGVIST
CCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEC
RGQLINSTQSAFRAGLAVIHQQPVLVEHLDVASAIFLGHEVGRGWLGWLSLPNQRHHDTM
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHH
ARQILAQLGLELPSLRTLVRNLSSEQRQMLAIAQVLIRKPQVVIIDEPTPLLRYEYQQTL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
LELIREWQAQGVAVLFSSQNLDHLFAVSNRILVLRRGRFVFEAATEKTSREEVVRAQIGA
HHHHHHHHCCCEEEEEECCCCHHHHHHCCCEEEEECCCEEEEHHHCCCHHHHHHHHHHCC
RDQQHLTPIIWALENYHRASQQAEALRQSQSSLEHDLASQNQLNRQLIGQLDQQVSNLDR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANAALQEAQRRLLSEREGERKVLARELHDQVIQDLVSLNYDIDNLRSQIDDPEQASLGLD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHCCCHH
DLRDNIRQLVSTVRAICGNLRPPTIDSLGVNAAIQSFVRDWSSRSGIEVQLDLDDDLERL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHH
PEMLEISAFRMIQEGLSNVRKHAQATKVGISLRTTARRTLLLTIADNGRGLQAEINLAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEEEEECCCCCEEEEEEEEEE
ANAGHYGLLGMSERVALVGGRFRVHNRAGGGLILEIEIPYQPL
ECCCCCCCCCCCCCCEEECCEEEEEECCCCCEEEEEECCCCCC
>Mature Secondary Structure
MFTCRHISKQFGTLPVIDEVSFDLAPGEVVGLTGQSGAGKSVLVRLLAGLEKPDTGVIST
CCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEC
RGQLINSTQSAFRAGLAVIHQQPVLVEHLDVASAIFLGHEVGRGWLGWLSLPNQRHHDTM
CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHH
ARQILAQLGLELPSLRTLVRNLSSEQRQMLAIAQVLIRKPQVVIIDEPTPLLRYEYQQTL
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
LELIREWQAQGVAVLFSSQNLDHLFAVSNRILVLRRGRFVFEAATEKTSREEVVRAQIGA
HHHHHHHHCCCEEEEEECCCCHHHHHHCCCEEEEECCCEEEEHHHCCCHHHHHHHHHHCC
RDQQHLTPIIWALENYHRASQQAEALRQSQSSLEHDLASQNQLNRQLIGQLDQQVSNLDR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ANAALQEAQRRLLSEREGERKVLARELHDQVIQDLVSLNYDIDNLRSQIDDPEQASLGLD
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHCCCHH
DLRDNIRQLVSTVRAICGNLRPPTIDSLGVNAAIQSFVRDWSSRSGIEVQLDLDDDLERL
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHH
PEMLEISAFRMIQEGLSNVRKHAQATKVGISLRTTARRTLLLTIADNGRGLQAEINLAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCEEEEEEEECCCCCEEEEEEEEEE
ANAGHYGLLGMSERVALVGGRFRVHNRAGGGLILEIEIPYQPL
ECCCCCCCCCCCCCCEEECCEEEEEECCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]