| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901207
Identifier: 159901207
GI number: 159901207
Start: 5998640
End: 5999437
Strand: Direct
Name: 159901207
Synonym: Haur_4695
Alternate gene names: NA
Gene position: 5998640-5999437 (Clockwise)
Preceding gene: 159901206
Following gene: 159901208
Centisome position: 94.52
GC content: 54.01
Gene sequence:
>798_bases ATGAGTAATCGCACGAACGACCTGATTCCCCTTAGCGATATGCATGGCCCCAGCCTGCCCGCTGCCGTTGACCGCGCCAC ATTTCAAGCCGAACTGAATAGCTTACGGGTGCGTGAGAAGGCCCATACCCGCGAGGGCGATGCGATTGCCGCTGCGCGTC GGCGTTTACCCATGGTTGAGGTTGCTGCCACAACTCTAGTGGTTGGCCCAAACGGCTTGGTTCCGTTGATTGAGGTTTTT GAGGGGCGCAAGCAACTGTTTGCCGCCTATATGATGTGGCATCATGGCGCGAATGCCGCCCAACAATGCGAAGGTTGCAC CATGAATGTTGGTCATGTGCTGGAATTGGGCTATTTACACTCGCGCGATGTAACTTTTGCTGTGTTGAGCCAAGGCCCAT TTGCTGAGAGCAACCGCTACCGCGAATTTATGGGCTGGGAACTGCCTTGGTATTCAGTGCCCGAATCCTCGCTTGATGCG CTGATTGCTGATCGCCATTTTGGCATCTGGGTGTGCTACGTTCAGGATAATGGTCGGGTGTTTGAAACCTATTGGACAAC TGGTCGTGGTTGCGAGCAAATGGGCAGTTCCTATGCCATGCTCGATATGACGATTTATGGGCGGCAAGAGGCTTGGGAAG ATTCTCCAGCTGGCTGGCCTCAACGCTTTTTCAACACGCGCTCAGCCCAAATGCGCACTGACGAACATGATCAAGCCGTT AATCGCCCCGCTGGACGGCCAATTTCACACTGGTCACGGCTGGCTGCTGGGCGCTCCGATGATATTATTGATATTTAA
Upstream 100 bases:
>100_bases CCCCGACATCTAATAATCAATACCTCAAAAGCTCATATGTTCTATATTTCATGCTATGATAGGTAGGCGGAGCCTTGTTA TAGTGATGAAGGAGCATCTG
Downstream 100 bases:
>100_bases GGTTGATCAACATTTGATTGGTGGGGATCGGTCATTGGGGGCTGGGGATCGGAGTCGAGATTGATATACAACTCCCAACC TCTAGGCTTCGATTCTGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MSNRTNDLIPLSDMHGPSLPAAVDRATFQAELNSLRVREKAHTREGDAIAAARRRLPMVEVAATTLVVGPNGLVPLIEVF EGRKQLFAAYMMWHHGANAAQQCEGCTMNVGHVLELGYLHSRDVTFAVLSQGPFAESNRYREFMGWELPWYSVPESSLDA LIADRHFGIWVCYVQDNGRVFETYWTTGRGCEQMGSSYAMLDMTIYGRQEAWEDSPAGWPQRFFNTRSAQMRTDEHDQAV NRPAGRPISHWSRLAAGRSDDIIDI
Sequences:
>Translated_265_residues MSNRTNDLIPLSDMHGPSLPAAVDRATFQAELNSLRVREKAHTREGDAIAAARRRLPMVEVAATTLVVGPNGLVPLIEVF EGRKQLFAAYMMWHHGANAAQQCEGCTMNVGHVLELGYLHSRDVTFAVLSQGPFAESNRYREFMGWELPWYSVPESSLDA LIADRHFGIWVCYVQDNGRVFETYWTTGRGCEQMGSSYAMLDMTIYGRQEAWEDSPAGWPQRFFNTRSAQMRTDEHDQAV NRPAGRPISHWSRLAAGRSDDIIDI >Mature_264_residues SNRTNDLIPLSDMHGPSLPAAVDRATFQAELNSLRVREKAHTREGDAIAAARRRLPMVEVAATTLVVGPNGLVPLIEVFE GRKQLFAAYMMWHHGANAAQQCEGCTMNVGHVLELGYLHSRDVTFAVLSQGPFAESNRYREFMGWELPWYSVPESSLDAL IADRHFGIWVCYVQDNGRVFETYWTTGRGCEQMGSSYAMLDMTIYGRQEAWEDSPAGWPQRFFNTRSAQMRTDEHDQAVN RPAGRPISHWSRLAAGRSDDIIDI
Specific function: Unknown
COG id: COG4312
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29851; Mature: 29720
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNRTNDLIPLSDMHGPSLPAAVDRATFQAELNSLRVREKAHTREGDAIAAARRRLPMVE CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEE VAATTLVVGPNGLVPLIEVFEGRKQLFAAYMMWHHGANAAQQCEGCTMNVGHVLELGYLH EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHCCCEE SRDVTFAVLSQGPFAESNRYREFMGWELPWYSVPESSLDALIADRHFGIWVCYVQDNGRV CCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCEE FETYWTTGRGCEQMGSSYAMLDMTIYGRQEAWEDSPAGWPQRFFNTRSAQMRTDEHDQAV EEEEECCCCCHHHHCCCEEEEEEEEECCHHCCCCCCCCCHHHHHCCCCHHCCCCHHHHHH NRPAGRPISHWSRLAAGRSDDIIDI CCCCCCCHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SNRTNDLIPLSDMHGPSLPAAVDRATFQAELNSLRVREKAHTREGDAIAAARRRLPMVE CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEE VAATTLVVGPNGLVPLIEVFEGRKQLFAAYMMWHHGANAAQQCEGCTMNVGHVLELGYLH EEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHCCCEE SRDVTFAVLSQGPFAESNRYREFMGWELPWYSVPESSLDALIADRHFGIWVCYVQDNGRV CCCCEEEEECCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCEE FETYWTTGRGCEQMGSSYAMLDMTIYGRQEAWEDSPAGWPQRFFNTRSAQMRTDEHDQAV EEEEECCCCCHHHHCCCEEEEEEEEECCHHCCCCCCCCCHHHHHCCCCHHCCCCHHHHHH NRPAGRPISHWSRLAAGRSDDIIDI CCCCCCCHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA