| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is hisB [H]
Identifier: 159901179
GI number: 159901179
Start: 5964496
End: 5965086
Strand: Direct
Name: hisB [H]
Synonym: Haur_4667
Alternate gene names: 159901179
Gene position: 5964496-5965086 (Clockwise)
Preceding gene: 159901176
Following gene: 159901182
Centisome position: 93.98
GC content: 51.44
Gene sequence:
>591_bases ATGGCTCGGATTGCAACGATCGAACGTAACACCCGTGAAACCCAAATTAAGCTCACGCTCAATCTCGATGGCTCTGGTCA AGTGGCGATCAATACGGGCATCGGGATGTATAACCATATGTTGGAGAGTTTCGCTCGCCACGGTCAATTTGATTTAGCAG TGACCTGCAATGGCGATTTACATATCGACGACCATCATTCGGTCGAAGATGTGGCAATTTGCTTGGGCATGGCGATTGAT CGGGCGCTGGGCGATAAGGCTGGTATCACCCGCACCGCCCATGCTTATGTGCCGATGGATGAGGCGCTGGCGTTTGTTGC GCTTGATCTGAGTGGCCGACCGTTTCATGTGCTCAACTTTAGCTGGACAAACCCTAGTATCGGTGGCTTGACCTGCGATT TGGTTGAGCATGTGTTTGAAAGTATTGCGATTCATGCCCGCATGAATTTGCATGCGAAAATCGAATATGGCCGCAACGAC CACCACAAGGCCGAAGCCTTATTCAAAGCTTTGGCGAGGGCACTCGATAGCGCCACCAAACATGATCCACGTTTGGGCGA TGCGATTCCCAGCACCAAAGGCGTGATTTGA
Upstream 100 bases:
>100_bases ATGGCGATGAGCTATCAGCGTGAAATCGTTATCAAGACTGGTTGGCAAAAATCGCCAGAGCAGGTACGATCAGGCAGCTT TAGCGAAAGGATGCATAAGT
Downstream 100 bases:
>100_bases TCGTTCCCCCCTCATTATAAGGGTAGGTTTTAATGATAATTGGGTGTAATTTGCCGTCGATTGACCTGCCCTCACCCCCT GCCCCCTCTCCCGCCGAGCG
Product: imidazoleglycerol-phosphate dehydratase
Products: NA
Alternate protein names: IGPD [H]
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MARIATIERNTRETQIKLTLNLDGSGQVAINTGIGMYNHMLESFARHGQFDLAVTCNGDLHIDDHHSVEDVAICLGMAID RALGDKAGITRTAHAYVPMDEALAFVALDLSGRPFHVLNFSWTNPSIGGLTCDLVEHVFESIAIHARMNLHAKIEYGRND HHKAEALFKALARALDSATKHDPRLGDAIPSTKGVI
Sequences:
>Translated_196_residues MARIATIERNTRETQIKLTLNLDGSGQVAINTGIGMYNHMLESFARHGQFDLAVTCNGDLHIDDHHSVEDVAICLGMAID RALGDKAGITRTAHAYVPMDEALAFVALDLSGRPFHVLNFSWTNPSIGGLTCDLVEHVFESIAIHARMNLHAKIEYGRND HHKAEALFKALARALDSATKHDPRLGDAIPSTKGVI >Mature_195_residues ARIATIERNTRETQIKLTLNLDGSGQVAINTGIGMYNHMLESFARHGQFDLAVTCNGDLHIDDHHSVEDVAICLGMAIDR ALGDKAGITRTAHAYVPMDEALAFVALDLSGRPFHVLNFSWTNPSIGGLTCDLVEHVFESIAIHARMNLHAKIEYGRNDH HKAEALFKALARALDSATKHDPRLGDAIPSTKGVI
Specific function: Histidine biosynthesis; sixth step. Histidine biosynthesis; eighth step. [C]
COG id: COG0131
COG function: function code E; Imidazoleglycerol-phosphate dehydratase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the imidazoleglycerol-phosphate dehydratase family [H]
Homologues:
Organism=Escherichia coli, GI87082027, Length=194, Percent_Identity=45.8762886597938, Blast_Score=173, Evalue=8e-45, Organism=Saccharomyces cerevisiae, GI6324776, Length=216, Percent_Identity=37.962962962963, Blast_Score=157, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000807 - InterPro: IPR020565 - InterPro: IPR020568 [H]
Pfam domain/function: PF00475 IGPD [H]
EC number: =4.2.1.19 [H]
Molecular weight: Translated: 21402; Mature: 21270
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: PS00954 IGP_DEHYDRATASE_1 ; PS00955 IGP_DEHYDRATASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIATIERNTRETQIKLTLNLDGSGQVAINTGIGMYNHMLESFARHGQFDLAVTCNGDL CCEEEEEECCCCEEEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCE HIDDHHSVEDVAICLGMAIDRALGDKAGITRTAHAYVPMDEALAFVALDLSGRPFHVLNF EECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHCEEEEEEECCCCCEEEEEE SWTNPSIGGLTCDLVEHVFESIAIHARMNLHAKIEYGRNDHHKAEALFKALARALDSATK EECCCCCCCEEHHHHHHHHHHHEEHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHC HDPRLGDAIPSTKGVI CCCCCCCCCCCCCCCC >Mature Secondary Structure ARIATIERNTRETQIKLTLNLDGSGQVAINTGIGMYNHMLESFARHGQFDLAVTCNGDL CEEEEEECCCCEEEEEEEEEECCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCE HIDDHHSVEDVAICLGMAIDRALGDKAGITRTAHAYVPMDEALAFVALDLSGRPFHVLNF EECCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHCEEEEEEECCCCCEEEEEE SWTNPSIGGLTCDLVEHVFESIAIHARMNLHAKIEYGRNDHHKAEALFKALARALDSATK EECCCCCCCEEHHHHHHHHHHHEEHEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHC HDPRLGDAIPSTKGVI CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA