| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901140
Identifier: 159901140
GI number: 159901140
Start: 5914451
End: 5914828
Strand: Direct
Name: 159901140
Synonym: Haur_4628
Alternate gene names: NA
Gene position: 5914451-5914828 (Clockwise)
Preceding gene: 159901139
Following gene: 159901141
Centisome position: 93.19
GC content: 47.62
Gene sequence:
>378_bases ATGATCTCTTCAAGCGTGTATATGTTGCTTGAGCAAGCGATCGATACTCCCGAAAAACTGCATTGTGTCATGCTATTTGC ACAACGAACAGTTAATCAAGGCACTGCTACTCACATCGCTCGCCAGCTAGGGCGCGATATATGGAGTATTGAGCGAGCAC TCAAAGAACTCAGTGAGGCAGGCATTCTTTCCATCGCCGGTGAAGGCAAATCGTCGTGTTACGATTATCAACCGCGTTCG TATGTGGTTAATGCGTTGGAATTATTAGTTCAAACCTACAACGACCCCATTTTGCGCAGCGAAATCTGCGATTATGTGCG CGAGTTAGCTAGCTACGCGCCGTATCGCGCTCACTTCCACACCGTTTTGGCAATCTAA
Upstream 100 bases:
>100_bases AAGGAACGGAAGATACACCAACAGGCCGTGGTGCCTGTAAACCGCCAAGATAGCGGGGTCTCTTTTCCGCGCAGTCAAAG AGGATTGCAAGGAGGCGAGC
Downstream 100 bases:
>100_bases AACCTGCGCCTACTCAGAATCTCCCGAGAGGAGAGAGAGTGGCGCAAGGGCTACATCGTCCTAGCTCAACCATAATTAAA CCCATCGCAAGCCCACCATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 125; Mature: 125
Protein sequence:
>125_residues MISSSVYMLLEQAIDTPEKLHCVMLFAQRTVNQGTATHIARQLGRDIWSIERALKELSEAGILSIAGEGKSSCYDYQPRS YVVNALELLVQTYNDPILRSEICDYVRELASYAPYRAHFHTVLAI
Sequences:
>Translated_125_residues MISSSVYMLLEQAIDTPEKLHCVMLFAQRTVNQGTATHIARQLGRDIWSIERALKELSEAGILSIAGEGKSSCYDYQPRS YVVNALELLVQTYNDPILRSEICDYVRELASYAPYRAHFHTVLAI >Mature_125_residues MISSSVYMLLEQAIDTPEKLHCVMLFAQRTVNQGTATHIARQLGRDIWSIERALKELSEAGILSIAGEGKSSCYDYQPRS YVVNALELLVQTYNDPILRSEICDYVRELASYAPYRAHFHTVLAI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14138; Mature: 14138
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISSSVYMLLEQAIDTPEKLHCVMLFAQRTVNQGTATHIARQLGRDIWSIERALKELSEA CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GILSIAGEGKSSCYDYQPRSYVVNALELLVQTYNDPILRSEICDYVRELASYAPYRAHFH CEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHH TVLAI HHHCC >Mature Secondary Structure MISSSVYMLLEQAIDTPEKLHCVMLFAQRTVNQGTATHIARQLGRDIWSIERALKELSEA CCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GILSIAGEGKSSCYDYQPRSYVVNALELLVQTYNDPILRSEICDYVRELASYAPYRAHFH CEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHH TVLAI HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA