| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159901137
Identifier: 159901137
GI number: 159901137
Start: 5909722
End: 5910612
Strand: Reverse
Name: 159901137
Synonym: Haur_4625
Alternate gene names: NA
Gene position: 5910612-5909722 (Counterclockwise)
Preceding gene: 159901138
Following gene: 159901134
Centisome position: 93.13
GC content: 50.17
Gene sequence:
>891_bases GTGAGCAATGATTATTTTCCTATTGAACAGTTAATCGCCCAACAATTGCCCGAGGCGATGGCCTTGCAGTTGCATGTATT GCCAGCCCACCAAGAATTAATTGCGCCCTTGCCAACCGGCTATGTTGGCCCCGTCATGGCGGCGGCTGAACAATGGCTGA AAGTACATGGCTACCGCACCTTAGGCCCATGGATGATCGCCTGGGGGCCAACTGGTCAGCCACAATTACGTCGCCCAGTC AGTGGCGCACTCAAAGCCATCCGCGAAAAAGATTTTCAAACCGTTGAAGTGCCCGAACAATTGCTGCTGGCAGTGCCATT TGTGGGTTGGCCTGTGCTGCCCCACAACTTTACCCAACCTGTTAATAATGTTGGGCTGAACATTATGGGTTCACCGTTGT TGCTAGCCTTAACCGACTCACCGCCAACCATGGCGTGGGTTCCGGTCGTACCACGCGGCACGAATACACTCTTTTCGATC GAGCGTAGCAAAATTGGCCTCTTGCCAGCTCCACCCAAGCCGGGCAAACAAATTTCGATGCTTGATGCTTGGCGGCGGGC AGGCTATACCCTTGGGCGTTTTGCCACAATCATAATCGGTGGATTAGGTTTTATCATATCACTCACTGTGATCATGGGGG TGCTCATAGGTGGCGAACCAATTGCTTCAATTCAAGGTGTAGCCTATGTGTATACCATTATCACAGGATTTCTGGCAGTT TTGTGGAGCCAAGCTATTATTATCACGTTGATTATTATATTTGCAATTATTGGGGCGTATAAAATGAATGCGATAGCCAA TTGGAATCGCTTTTGGCAGCAACGCCCAGTTCCACCCGAACTCTTGCTAGGTAGTCGTGGTGATGGCCAAGTTGGCACAT GGTTGGGCTAA
Upstream 100 bases:
>100_bases TGGCGACAACGCGGCAGTGCAATTCAGGCATGGAACCGTTTTTGGGCAACGACCCCAACACCACCTCTTTTGATCATTGA GCTAGAGTCGGAGAAACAGC
Downstream 100 bases:
>100_bases ATTACCAACCCCAATCGTCATCACGGCGGCGCTTGCGGCGACGTTTGCGCCATGGCATCAACAGCGATTTATGATACGGC TCGCGGCCTTCGATCAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MSNDYFPIEQLIAQQLPEAMALQLHVLPAHQELIAPLPTGYVGPVMAAAEQWLKVHGYRTLGPWMIAWGPTGQPQLRRPV SGALKAIREKDFQTVEVPEQLLLAVPFVGWPVLPHNFTQPVNNVGLNIMGSPLLLALTDSPPTMAWVPVVPRGTNTLFSI ERSKIGLLPAPPKPGKQISMLDAWRRAGYTLGRFATIIIGGLGFIISLTVIMGVLIGGEPIASIQGVAYVYTIITGFLAV LWSQAIIITLIIIFAIIGAYKMNAIANWNRFWQQRPVPPELLLGSRGDGQVGTWLG
Sequences:
>Translated_296_residues MSNDYFPIEQLIAQQLPEAMALQLHVLPAHQELIAPLPTGYVGPVMAAAEQWLKVHGYRTLGPWMIAWGPTGQPQLRRPV SGALKAIREKDFQTVEVPEQLLLAVPFVGWPVLPHNFTQPVNNVGLNIMGSPLLLALTDSPPTMAWVPVVPRGTNTLFSI ERSKIGLLPAPPKPGKQISMLDAWRRAGYTLGRFATIIIGGLGFIISLTVIMGVLIGGEPIASIQGVAYVYTIITGFLAV LWSQAIIITLIIIFAIIGAYKMNAIANWNRFWQQRPVPPELLLGSRGDGQVGTWLG >Mature_295_residues SNDYFPIEQLIAQQLPEAMALQLHVLPAHQELIAPLPTGYVGPVMAAAEQWLKVHGYRTLGPWMIAWGPTGQPQLRRPVS GALKAIREKDFQTVEVPEQLLLAVPFVGWPVLPHNFTQPVNNVGLNIMGSPLLLALTDSPPTMAWVPVVPRGTNTLFSIE RSKIGLLPAPPKPGKQISMLDAWRRAGYTLGRFATIIIGGLGFIISLTVIMGVLIGGEPIASIQGVAYVYTIITGFLAVL WSQAIIITLIIIFAIIGAYKMNAIANWNRFWQQRPVPPELLLGSRGDGQVGTWLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32288; Mature: 32156
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNDYFPIEQLIAQQLPEAMALQLHVLPAHQELIAPLPTGYVGPVMAAAEQWLKVHGYRT CCCCCCCHHHHHHHHCCHHHEEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEE LGPWMIAWGPTGQPQLRRPVSGALKAIREKDFQTVEVPEQLLLAVPFVGWPVLPHNFTQP CCCEEEEECCCCCHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC VNNVGLNIMGSPLLLALTDSPPTMAWVPVVPRGTNTLFSIERSKIGLLPAPPKPGKQISM HHHCCCEEECCCEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEHH LDAWRRAGYTLGRFATIIIGGLGFIISLTVIMGVLIGGEPIASIQGVAYVYTIITGFLAV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LWSQAIIITLIIIFAIIGAYKMNAIANWNRFWQQRPVPPELLLGSRGDGQVGTWLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCC >Mature Secondary Structure SNDYFPIEQLIAQQLPEAMALQLHVLPAHQELIAPLPTGYVGPVMAAAEQWLKVHGYRT CCCCCCHHHHHHHHCCHHHEEEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCEE LGPWMIAWGPTGQPQLRRPVSGALKAIREKDFQTVEVPEQLLLAVPFVGWPVLPHNFTQP CCCEEEEECCCCCHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC VNNVGLNIMGSPLLLALTDSPPTMAWVPVVPRGTNTLFSIERSKIGLLPAPPKPGKQISM HHHCCCEEECCCEEEEEECCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCEEHH LDAWRRAGYTLGRFATIIIGGLGFIISLTVIMGVLIGGEPIASIQGVAYVYTIITGFLAV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LWSQAIIITLIIIFAIIGAYKMNAIANWNRFWQQRPVPPELLLGSRGDGQVGTWLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA