| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900944
Identifier: 159900944
GI number: 159900944
Start: 5670318
End: 5672081
Strand: Reverse
Name: 159900944
Synonym: Haur_4431
Alternate gene names: NA
Gene position: 5672081-5670318 (Counterclockwise)
Preceding gene: 159900952
Following gene: 159900943
Centisome position: 89.37
GC content: 53.06
Gene sequence:
>1764_bases ATGACCAGCCACGATCAGCGTGCAGAGCGCAAAAGTATTTGGCACGATTTATTAGAACGTCGGATCAATCGCCGGACCCT TGTTGCCAGTGGTGCTGCCGCTGCTGCGGTCGCGGCCTTGCCCTTAGATCTGCAAACTGCTGAAGCGGCGCACTATCATG CTCCATTGTCAGCCCCAGCCTTGGCTCAACGCCAAGCTCAAGGTTCATTGCCCTTCAAACCAATCAGCCCCAGCACCGCC GACGATTTGATTTTGCCCGAAGGCTTCCGCTACGATTTGTTGGCCCACCGCGGCCATGATATGGGCGATGGCAGTTTGTT TGGCGAAAATGCCGATTTCCTGGCGTTCTTCCCAATCGATATGCTCCAAAAAGGCCTCGACCAAAATCGCCCACAATTTG GCTTTACCCGCAGCGATTTATCCAGCACTGATGGTTTGTTGCTGGTCAACCACGAATATATCAACCCTATGTTTATCTCG GGCTACACTGGCTCAGGCGCAAAATCTGGCGATCAAATTAACGCCGAAAAGCATATGGTTGGCATGAGCGTGATTCGGGT TAAGCGCAATAGCGATGGCCGTTGGTATTTCGACCAAACTGATACCGCTCACAACCGCCGCATCGATGCAACTACTCCAA TCACCTTAACTGGCCCAGCCGCGCAACTTGATGGTGGCCCGATGGCAATTGGCTCACTTGGCAATTGTTCCGGTGGTGTA ACACCTTGGGGCACAGCACTGAGCTGCGAAGAAAACTTCCAAGATTATCCAAATCCAGCACCAACTGGCTATGGCTGGGA ACCAGAAATCTACGGCAAGCGCCACTACGGTTGGGTCGTCGAAGTTGATCCATTCGATAAAAACAGCATGCCACGCAAAC ATACCGCCATGGGTCGCTTCCGCCACGAAAATGTAGCGGTACGAGTTGGCAGCGACGGCACGGTTGTAGCCTATATGGGC GATGACAAAGCCGATTCATGCGTCTATAAGTTTGTGGCTGACCGCAAATTGACCAACTTGGCAGATCGCCCAGGCAATAT GCAAATTCTCGAAAGCGGCCAACTCTATGCCGCCGACTTTGCCAATGGCAAGTGGATTTTGCTCGATTACAATAGCCAAA GCGCCTTGCAAAGTGCCAAAGATAGCAAAGGCAATTTGCTATTTAGCTCGCAAGCCGATGTTTTGGCCGATACCCAAGCC GCTGCCATGGCGCTCAAAGCCACGCCCGTTGATCGCCCAGAAGATATTGAAATTCACCCACTCGATGGCAGTGTCTATGT TGCCTTGACCAATAATACTGGCCACGGCAACTTCCACGGCCAAATCGTGCGCATGGCCGAAACCGACAATAATCCAGCTG CAACCAGCTTCGAATGGAGCATCTTCGCGGTTGGTGGCTCGCAAAGCGGCTTCTCATCGCCCGACAATTTGGTGTTCGAT GGCGAAGGCAACTTGTGGATGGTAACCGACATCTCATCATCACGCACCAACAAAGGGATCTACAAATTCCAAGGCAACAA CGGTCTCTTCTTCTTCCGCACCAGCGGCCCTGATGCTGGGATCGCCTTCCAATTTGCCTCCGGGCCAGTGGAAAGCGAAA TGACTGGGCCATGCTGGTCGCCTGATGGCCGAACCCTGTTCTTGGCGATTCAACACCCAGGTGAAGAATCCAAGAGCTTG ACCGAACTGAGCAGCCACTGGCCAATTGGTGGTAACGAAGTGCCGCGCTCAGGGGTTGTCGCAATTACCGGGTTCAAGCG CTAG
Upstream 100 bases:
>100_bases ATCTTTACATACTGATGAGTTGGGCTTGACATGGCTTACGTATGCTTTGGCTGTGTCCAGTTGAAATGAATGGTGTGTTG CCAACTTTGGAGGGATTTCA
Downstream 100 bases:
>100_bases AATTTAGACCGCAGTTATAGCGCAGCCTCCAATGATGTGGGCTGCGCCTTTATTTTGAATTGTTTGGAGTTACGATGACT ATGCAAGAACTTTTGGTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphatase; Tat Pathway Signal Sequence Domain-Containing Protein; Tat Pathway Signal Sequence Domain Protein; Twin-Arginine Translocation Pathway Signal Protein; UxpB Protein; DTDP-Glucose 4 6-Dehydratase; Twin Arginine Translocation Pathway Signal Protein; Phosphatase-Like Protein; DTDP-D-Glucose 4 6-Dehydratase; Glutamate-Cysteine Ligase/Putative Amino Acid Ligase; Alkaline Phosphatase Family Protein; Exported Protein
Number of amino acids: Translated: 587; Mature: 586
Protein sequence:
>587_residues MTSHDQRAERKSIWHDLLERRINRRTLVASGAAAAAVAALPLDLQTAEAAHYHAPLSAPALAQRQAQGSLPFKPISPSTA DDLILPEGFRYDLLAHRGHDMGDGSLFGENADFLAFFPIDMLQKGLDQNRPQFGFTRSDLSSTDGLLLVNHEYINPMFIS GYTGSGAKSGDQINAEKHMVGMSVIRVKRNSDGRWYFDQTDTAHNRRIDATTPITLTGPAAQLDGGPMAIGSLGNCSGGV TPWGTALSCEENFQDYPNPAPTGYGWEPEIYGKRHYGWVVEVDPFDKNSMPRKHTAMGRFRHENVAVRVGSDGTVVAYMG DDKADSCVYKFVADRKLTNLADRPGNMQILESGQLYAADFANGKWILLDYNSQSALQSAKDSKGNLLFSSQADVLADTQA AAMALKATPVDRPEDIEIHPLDGSVYVALTNNTGHGNFHGQIVRMAETDNNPAATSFEWSIFAVGGSQSGFSSPDNLVFD GEGNLWMVTDISSSRTNKGIYKFQGNNGLFFFRTSGPDAGIAFQFASGPVESEMTGPCWSPDGRTLFLAIQHPGEESKSL TELSSHWPIGGNEVPRSGVVAITGFKR
Sequences:
>Translated_587_residues MTSHDQRAERKSIWHDLLERRINRRTLVASGAAAAAVAALPLDLQTAEAAHYHAPLSAPALAQRQAQGSLPFKPISPSTA DDLILPEGFRYDLLAHRGHDMGDGSLFGENADFLAFFPIDMLQKGLDQNRPQFGFTRSDLSSTDGLLLVNHEYINPMFIS GYTGSGAKSGDQINAEKHMVGMSVIRVKRNSDGRWYFDQTDTAHNRRIDATTPITLTGPAAQLDGGPMAIGSLGNCSGGV TPWGTALSCEENFQDYPNPAPTGYGWEPEIYGKRHYGWVVEVDPFDKNSMPRKHTAMGRFRHENVAVRVGSDGTVVAYMG DDKADSCVYKFVADRKLTNLADRPGNMQILESGQLYAADFANGKWILLDYNSQSALQSAKDSKGNLLFSSQADVLADTQA AAMALKATPVDRPEDIEIHPLDGSVYVALTNNTGHGNFHGQIVRMAETDNNPAATSFEWSIFAVGGSQSGFSSPDNLVFD GEGNLWMVTDISSSRTNKGIYKFQGNNGLFFFRTSGPDAGIAFQFASGPVESEMTGPCWSPDGRTLFLAIQHPGEESKSL TELSSHWPIGGNEVPRSGVVAITGFKR >Mature_586_residues TSHDQRAERKSIWHDLLERRINRRTLVASGAAAAAVAALPLDLQTAEAAHYHAPLSAPALAQRQAQGSLPFKPISPSTAD DLILPEGFRYDLLAHRGHDMGDGSLFGENADFLAFFPIDMLQKGLDQNRPQFGFTRSDLSSTDGLLLVNHEYINPMFISG YTGSGAKSGDQINAEKHMVGMSVIRVKRNSDGRWYFDQTDTAHNRRIDATTPITLTGPAAQLDGGPMAIGSLGNCSGGVT PWGTALSCEENFQDYPNPAPTGYGWEPEIYGKRHYGWVVEVDPFDKNSMPRKHTAMGRFRHENVAVRVGSDGTVVAYMGD DKADSCVYKFVADRKLTNLADRPGNMQILESGQLYAADFANGKWILLDYNSQSALQSAKDSKGNLLFSSQADVLADTQAA AMALKATPVDRPEDIEIHPLDGSVYVALTNNTGHGNFHGQIVRMAETDNNPAATSFEWSIFAVGGSQSGFSSPDNLVFDG EGNLWMVTDISSSRTNKGIYKFQGNNGLFFFRTSGPDAGIAFQFASGPVESEMTGPCWSPDGRTLFLAIQHPGEESKSLT ELSSHWPIGGNEVPRSGVVAITGFKR
Specific function: Unknown
COG id: COG3211
COG function: function code R; Predicted phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 63723; Mature: 63591
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSHDQRAERKSIWHDLLERRINRRTLVASGAAAAAVAALPLDLQTAEAAHYHAPLSAPA CCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHEECCCCCCCCCCHHCCCCCCCCH LAQRQAQGSLPFKPISPSTADDLILPEGFRYDLLAHRGHDMGDGSLFGENADFLAFFPID HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCEECCCCCEEEECCHH MLQKGLDQNRPQFGFTRSDLSSTDGLLLVNHEYINPMFISGYTGSGAKSGDQINAEKHMV HHHHHHHCCCCCCCCCHHCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHE GMSVIRVKRNSDGRWYFDQTDTAHNRRIDATTPITLTGPAAQLDGGPMAIGSLGNCSGGV EEEEEEEEECCCCCEEECCCCCCCCCEECCCCCEEEECCHHHCCCCCEEECCCCCCCCCC TPWGTALSCEENFQDYPNPAPTGYGWEPEIYGKRHYGWVVEVDPFDKNSMPRKHTAMGRF CCCCCEEECHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCE RHENVAVRVGSDGTVVAYMGDDKADSCVYKFVADRKLTNLADRPGNMQILESGQLYAADF ECCCEEEEECCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHCCCCCEEEEECCCEEEEEC ANGKWILLDYNSQSALQSAKDSKGNLLFSSQADVLADTQAAAMALKATPVDRPEDIEIHP CCCEEEEEECCCHHHHHHHCCCCCCEEEECCCCHHCCCHHHEEEEECCCCCCCCCCEEEE LDGSVYVALTNNTGHGNFHGQIVRMAETDNNPAATSFEWSIFAVGGSQSGFSSPDNLVFD CCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEE GEGNLWMVTDISSSRTNKGIYKFQGNNGLFFFRTSGPDAGIAFQFASGPVESEMTGPCWS CCCCEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCC PDGRTLFLAIQHPGEESKSLTELSSHWPIGGNEVPRSGVVAITGFKR CCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCC >Mature Secondary Structure TSHDQRAERKSIWHDLLERRINRRTLVASGAAAAAVAALPLDLQTAEAAHYHAPLSAPA CCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHEECCCCCCCCCCHHCCCCCCCCH LAQRQAQGSLPFKPISPSTADDLILPEGFRYDLLAHRGHDMGDGSLFGENADFLAFFPID HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCEECCCCCEEEECCHH MLQKGLDQNRPQFGFTRSDLSSTDGLLLVNHEYINPMFISGYTGSGAKSGDQINAEKHMV HHHHHHHCCCCCCCCCHHCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHHE GMSVIRVKRNSDGRWYFDQTDTAHNRRIDATTPITLTGPAAQLDGGPMAIGSLGNCSGGV EEEEEEEEECCCCCEEECCCCCCCCCEECCCCCEEEECCHHHCCCCCEEECCCCCCCCCC TPWGTALSCEENFQDYPNPAPTGYGWEPEIYGKRHYGWVVEVDPFDKNSMPRKHTAMGRF CCCCCEEECHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHCE RHENVAVRVGSDGTVVAYMGDDKADSCVYKFVADRKLTNLADRPGNMQILESGQLYAADF ECCCEEEEECCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHCCCCCEEEEECCCEEEEEC ANGKWILLDYNSQSALQSAKDSKGNLLFSSQADVLADTQAAAMALKATPVDRPEDIEIHP CCCEEEEEECCCHHHHHHHCCCCCCEEEECCCCHHCCCHHHEEEEECCCCCCCCCCEEEE LDGSVYVALTNNTGHGNFHGQIVRMAETDNNPAATSFEWSIFAVGGSQSGFSSPDNLVFD CCCEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEE GEGNLWMVTDISSSRTNKGIYKFQGNNGLFFFRTSGPDAGIAFQFASGPVESEMTGPCWS CCCCEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCC PDGRTLFLAIQHPGEESKSLTELSSHWPIGGNEVPRSGVVAITGFKR CCCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA