Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900937

Identifier: 159900937

GI number: 159900937

Start: 5660534

End: 5661181

Strand: Reverse

Name: 159900937

Synonym: Haur_4424

Alternate gene names: NA

Gene position: 5661181-5660534 (Counterclockwise)

Preceding gene: 159900938

Following gene: 159900936

Centisome position: 89.2

GC content: 38.27

Gene sequence:

>648_bases
ATGACCGCAATTCAACGTTGGTTAATGGCCGCTTTAGCCCTGAGCTGTTTGGTGCTTAGTTTTTACAGTTATACAATCAA
TCATAACTTGCAAGTGGTACAAGCTCGTCAGTATGGGCAAATTGCGACAACTGGTGAATCATTGTGGTTTAGTTGGTATA
AATGTGTTGAAGAACTTAGCTTTGCTATGAGTGCAGCTGATCAGAATAATCAGGCGTATGTGCTAGAATACCTTTCAAAT
GCCGAACTATATTGTCAATTATCAACGCAATTTATCTATAACTACGATTCTGCTTTAAACTGGCCTATCAAACCTTGGTG
GAATTTAAGTCTCACCTCTTCTGGTAATGGTGTTGGATTTGTGAATTTATTTATATATTATCCATCCAAAATAAATCAAA
TTCATAGCTCTATTAAAGAGGAAAGTTTAGTTAGTCCAGCCAATCGTGCTCGAATCCAACAACTTCACGATGACATCAAA
ATATTTGCCCAGCAAATACCTGAATCAATGCTACAAGAGGGTGATATCGATAAAATCCATGAGGCGCTGGCGGGATGGTG
TGGAATGGTCAATGATGTCAAAGCCAAAGAAACAATTATATTGGCTGAAGAACAATACAGAGGTGTTTGTAGGAAGGAGC
AGTTCTAA

Upstream 100 bases:

>100_bases
TATAAGAGTGGGCCTTGTAATAAGTAGGTAGTTTGAATAGCTATAACAGTGGCCTGCGATAAACAGTAGGCTATTGTTAT
GGTGCAACAAAGGAGCTCAT

Downstream 100 bases:

>100_bases
ATGTATCATGTACCAAAAACCAGCCGCTGGCAGTATGGTTGTTTACAACAATCCCTGTATCTCGTCAATATTGGGTTGTA
TTCGCTGATGGTCTTTCTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MTAIQRWLMAALALSCLVLSFYSYTINHNLQVVQARQYGQIATTGESLWFSWYKCVEELSFAMSAADQNNQAYVLEYLSN
AELYCQLSTQFIYNYDSALNWPIKPWWNLSLTSSGNGVGFVNLFIYYPSKINQIHSSIKEESLVSPANRARIQQLHDDIK
IFAQQIPESMLQEGDIDKIHEALAGWCGMVNDVKAKETIILAEEQYRGVCRKEQF

Sequences:

>Translated_215_residues
MTAIQRWLMAALALSCLVLSFYSYTINHNLQVVQARQYGQIATTGESLWFSWYKCVEELSFAMSAADQNNQAYVLEYLSN
AELYCQLSTQFIYNYDSALNWPIKPWWNLSLTSSGNGVGFVNLFIYYPSKINQIHSSIKEESLVSPANRARIQQLHDDIK
IFAQQIPESMLQEGDIDKIHEALAGWCGMVNDVKAKETIILAEEQYRGVCRKEQF
>Mature_214_residues
TAIQRWLMAALALSCLVLSFYSYTINHNLQVVQARQYGQIATTGESLWFSWYKCVEELSFAMSAADQNNQAYVLEYLSNA
ELYCQLSTQFIYNYDSALNWPIKPWWNLSLTSSGNGVGFVNLFIYYPSKINQIHSSIKEESLVSPANRARIQQLHDDIKI
FAQQIPESMLQEGDIDKIHEALAGWCGMVNDVKAKETIILAEEQYRGVCRKEQF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24645; Mature: 24514

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAIQRWLMAALALSCLVLSFYSYTINHNLQVVQARQYGQIATTGESLWFSWYKCVEELS
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECHHHHHHHHHHHHHHHH
FAMSAADQNNQAYVLEYLSNAELYCQLSTQFIYNYDSALNWPIKPWWNLSLTSSGNGVGF
HHHHHCCCCCCEEEEEECCCCEEEEEEEHHEEEECCCCCCCCCCCCEEEEEECCCCCEEE
VNLFIYYPSKINQIHSSIKEESLVSPANRARIQQLHDDIKIFAQQIPESMLQEGDIDKIH
EEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
EALAGWCGMVNDVKAKETIILAEEQYRGVCRKEQF
HHHHHHHHHHCCCCCCCEEEEECHHHCCCHHCCCC
>Mature Secondary Structure 
TAIQRWLMAALALSCLVLSFYSYTINHNLQVVQARQYGQIATTGESLWFSWYKCVEELS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEECHHHHHHHHHHHHHHHH
FAMSAADQNNQAYVLEYLSNAELYCQLSTQFIYNYDSALNWPIKPWWNLSLTSSGNGVGF
HHHHHCCCCCCEEEEEECCCCEEEEEEEHHEEEECCCCCCCCCCCCEEEEEECCCCCEEE
VNLFIYYPSKINQIHSSIKEESLVSPANRARIQQLHDDIKIFAQQIPESMLQEGDIDKIH
EEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
EALAGWCGMVNDVKAKETIILAEEQYRGVCRKEQF
HHHHHHHHHHCCCCCCCEEEEECHHHCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA