Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900936

Identifier: 159900936

GI number: 159900936

Start: 5660117

End: 5660533

Strand: Reverse

Name: 159900936

Synonym: Haur_4423

Alternate gene names: NA

Gene position: 5660533-5660117 (Counterclockwise)

Preceding gene: 159900937

Following gene: 159900935

Centisome position: 89.19

GC content: 40.53

Gene sequence:

>417_bases
ATGTATCATGTACCAAAAACCAGCCGCTGGCAGTATGGTTGTTTACAACAATCCCTGTATCTCGTCAATATTGGGTTGTA
TTCGCTGATGGTCTTTCTAACTATTTTTAGTGCTTCAAAAATTGTCCGTTGGTGGCTTGATGATCCAAGATATGAATTAG
ATTATGCAACATTTATTTGGCTTCCGATCGGTTTGCTACTGCTGAGTCCATTTATTTGGCAAAGGATGTATGCGCTGGGA
ACTTTAGCAATTACTGGAAGTAGCTTGCTATTGCTGAATATATTTCTCATGGTTTTTTTGCGGGTCGATTTTAGTGATGC
TGATCAAATCGGTTGGAGTGTGGTAATACTCTTTTCGGTGGCGATAACCTTGGTTGTTTGGTATCGGGCTAAGCCATGGC
GTAAGTTCAATCGGTAA

Upstream 100 bases:

>100_bases
GGCGGGATGGTGTGGAATGGTCAATGATGTCAAAGCCAAAGAAACAATTATATTGGCTGAAGAACAATACAGAGGTGTTT
GTAGGAAGGAGCAGTTCTAA

Downstream 100 bases:

>100_bases
ATTGATAAACGCATAGGCATGCTAGATGATTGAACAGCTTTAAGATAGTTCGTTCTAGACAACCAAGATCTAGCATGCAC
TGATTATTCTCCGGTTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MYHVPKTSRWQYGCLQQSLYLVNIGLYSLMVFLTIFSASKIVRWWLDDPRYELDYATFIWLPIGLLLLSPFIWQRMYALG
TLAITGSSLLLLNIFLMVFLRVDFSDADQIGWSVVILFSVAITLVVWYRAKPWRKFNR

Sequences:

>Translated_138_residues
MYHVPKTSRWQYGCLQQSLYLVNIGLYSLMVFLTIFSASKIVRWWLDDPRYELDYATFIWLPIGLLLLSPFIWQRMYALG
TLAITGSSLLLLNIFLMVFLRVDFSDADQIGWSVVILFSVAITLVVWYRAKPWRKFNR
>Mature_138_residues
MYHVPKTSRWQYGCLQQSLYLVNIGLYSLMVFLTIFSASKIVRWWLDDPRYELDYATFIWLPIGLLLLSPFIWQRMYALG
TLAITGSSLLLLNIFLMVFLRVDFSDADQIGWSVVILFSVAITLVVWYRAKPWRKFNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16296; Mature: 16296

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYHVPKTSRWQYGCLQQSLYLVNIGLYSLMVFLTIFSASKIVRWWLDDPRYELDYATFIW
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH
LPIGLLLLSPFIWQRMYALGTLAITGSSLLLLNIFLMVFLRVDFSDADQIGWSVVILFSV
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
AITLVVWYRAKPWRKFNR
HHHHHHHHCCCCHHCCCC
>Mature Secondary Structure
MYHVPKTSRWQYGCLQQSLYLVNIGLYSLMVFLTIFSASKIVRWWLDDPRYELDYATFIW
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHH
LPIGLLLLSPFIWQRMYALGTLAITGSSLLLLNIFLMVFLRVDFSDADQIGWSVVILFSV
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
AITLVVWYRAKPWRKFNR
HHHHHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA