Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900878

Identifier: 159900878

GI number: 159900878

Start: 5577983

End: 5578402

Strand: Direct

Name: 159900878

Synonym: Haur_4365

Alternate gene names: NA

Gene position: 5577983-5578402 (Clockwise)

Preceding gene: 159900877

Following gene: 159900879

Centisome position: 87.89

GC content: 52.62

Gene sequence:

>420_bases
ATGCTAGCCTGTAGCTATTGTGGTGGCGATGTCCCCGACGATTGGGAAGAATGTGCGACCTGTGGCTGGTTGCGTGATGG
CTCGTTGGCCTTGCCACTTGAGCCACTCAAATGCCCATATTGTGGTGATGATGTGGCCGATGATTGGGAAGAGTGTCCGA
GCTGTGGCTGGTTGCGCGATGGCTCATTGGGAATTCCCCAGCCCGCCCCGCCGCCAGCTACTGTGCACCAACGAATTTGC
TTGCGTTGCCAAGCGCAGATGACATTTTTGGGCTTCAAGCAATTTCGTGAAAGCTCAACTTCGCTGGATATTTTGCAAGG
CCGTTTTGGCTCGTTTCGCCAAGATTTTCAAATTTTGGAGTTGCATGGCTGTGGTTATTGTGGCTATGCCGAGTTGGCCT
TGCCGCACATTGGTAGTTAA

Upstream 100 bases:

>100_bases
GTGAGTTTGCTGCTTGCGCCGTTGCTTTTGCCTCTGCAACGCCTTATTCCCCTCAGCGTATTGTTCTTGCTTAAAATTAA
TTCCTAGCGAGAGAGTATTT

Downstream 100 bases:

>100_bases
TTGATGGCGCAACAATCGCCTGCTAGCGGCGTATAACCCCATAGCGAACCATAACAGGAGGAACAACTATGGGGTTATTT
GATGGATTAATGGGCAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MLACSYCGGDVPDDWEECATCGWLRDGSLALPLEPLKCPYCGDDVADDWEECPSCGWLRDGSLGIPQPAPPPATVHQRIC
LRCQAQMTFLGFKQFRESSTSLDILQGRFGSFRQDFQILELHGCGYCGYAELALPHIGS

Sequences:

>Translated_139_residues
MLACSYCGGDVPDDWEECATCGWLRDGSLALPLEPLKCPYCGDDVADDWEECPSCGWLRDGSLGIPQPAPPPATVHQRIC
LRCQAQMTFLGFKQFRESSTSLDILQGRFGSFRQDFQILELHGCGYCGYAELALPHIGS
>Mature_139_residues
MLACSYCGGDVPDDWEECATCGWLRDGSLALPLEPLKCPYCGDDVADDWEECPSCGWLRDGSLGIPQPAPPPATVHQRIC
LRCQAQMTFLGFKQFRESSTSLDILQGRFGSFRQDFQILELHGCGYCGYAELALPHIGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15309; Mature: 15309

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
10.1 %Cys+Met (Translated Protein)
8.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
10.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLACSYCGGDVPDDWEECATCGWLRDGSLALPLEPLKCPYCGDDVADDWEECPSCGWLRD
CEECCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
GSLGIPQPAPPPATVHQRICLRCQAQMTFLGFKQFRESSTSLDILQGRFGSFRQDFQILE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHCCCEEEE
LHGCGYCGYAELALPHIGS
ECCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MLACSYCGGDVPDDWEECATCGWLRDGSLALPLEPLKCPYCGDDVADDWEECPSCGWLRD
CEECCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCHHHHHHCCCCCCCCC
GSLGIPQPAPPPATVHQRICLRCQAQMTFLGFKQFRESSTSLDILQGRFGSFRQDFQILE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHCCCEEEE
LHGCGYCGYAELALPHIGS
ECCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA