Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900866

Identifier: 159900866

GI number: 159900866

Start: 5561680

End: 5562702

Strand: Direct

Name: 159900866

Synonym: Haur_4353

Alternate gene names: NA

Gene position: 5561680-5562702 (Clockwise)

Preceding gene: 159900854

Following gene: 159900867

Centisome position: 87.63

GC content: 54.15

Gene sequence:

>1023_bases
ATGCAATTACCAAGTATGTTGCACATCTTTGTGCTAGCATTTGAGGAGCGTGTGATGTCTGATAACGATTATCGACCTAA
ATTTGATCCCCAAACTGGCCAGCCCATCCCGAACCAACCCCAAGGCGGTTATCCACCACCACCGCCTCAAGGTGGCTATC
CACCACCACCGCCCCAACCAAACTATGGTGCTCCAGCAGCAGGTGGCTACACCATGGCCAGCGAGCCAGGCCGCCCGCTC
GATTTGCCCGAACCACCAGTTGCTTTGAGTGGCCGGGGCATGACCACTGGCTTGCGCTACAAAATTATTGGAACTGTGCT
CCAAGCAGCGATCATCGAGCTTGATCCAGGCCAGATGATCTTCTCGGAAAGCGGCGGGATGTCGTGGATGAGCGGCAACG
TTCAGATGAACACGAATTCTGGCGGCGGTATCGGCAAGATGTTCAAACGGGCTTTCTCAGGCGAATCGTTGTTCATTGTC
GATTTCACGGTTGCAGGCGGCACTGGTTTGATTGGTTTTGCCAGCGAAATGCCCGGCAAGATTGTGCCATTGCACCTCGC
CCCCGGCCAAGAAATCATCATGCAAAAAGATTCGTTTATGTGTGCCGAAAAGTCGGTTCAGCTTGATATTCACTTCCGCC
GTAAATTGGGCGCAGGCCTGTTTGGCGGCGAAGGCTTTATCATGCAACGCGCGACTGGCCCAGGCGTGGTTTTTGCCGAG
CTTGATGGCGAAGTCGTCGAATATTACTTGCAACCAGGCCAGGTGATGAAGGTCGATACTGGTCACGTGGCGATGTATGA
GCCAAGCGTCCAGTTCGATATTGAAATGGTTCGCGGTTTCAAGAATATTCTCTTCGGCGGCGAAGGCTTGTTCCTGGCAA
CCTTGCGCGGCCCTGGTAAAGTTTGGCTGCAAACCATGCCTGTCATGAACGTTGCCAAGAAATTGGCCGAATACATGCCA
GCCAGTGGTGGCGGCGGCAGCGCTGGCGGTAACATCATCGGCAGCATTCTCGGCGGCGACTAA

Upstream 100 bases:

>100_bases
TAGAAACGCGCTACCATCATAACGCATAGCATCATTAAGCGCAACCACCAGCCCTAGCAACATTTGGCCAAGCACGGGCG
TACTAGACGACAGTTGTACA

Downstream 100 bases:

>100_bases
GCGCTAGCACTATTCCAGCGATGAGGGCAGCAACACCTTCATCGCTGGTTTGTTTTATCTCGGGGATTGGTTGTTGGGGA
TCGGGGATCGGATTTTGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MQLPSMLHIFVLAFEERVMSDNDYRPKFDPQTGQPIPNQPQGGYPPPPPQGGYPPPPPQPNYGAPAAGGYTMASEPGRPL
DLPEPPVALSGRGMTTGLRYKIIGTVLQAAIIELDPGQMIFSESGGMSWMSGNVQMNTNSGGGIGKMFKRAFSGESLFIV
DFTVAGGTGLIGFASEMPGKIVPLHLAPGQEIIMQKDSFMCAEKSVQLDIHFRRKLGAGLFGGEGFIMQRATGPGVVFAE
LDGEVVEYYLQPGQVMKVDTGHVAMYEPSVQFDIEMVRGFKNILFGGEGLFLATLRGPGKVWLQTMPVMNVAKKLAEYMP
ASGGGGSAGGNIIGSILGGD

Sequences:

>Translated_340_residues
MQLPSMLHIFVLAFEERVMSDNDYRPKFDPQTGQPIPNQPQGGYPPPPPQGGYPPPPPQPNYGAPAAGGYTMASEPGRPL
DLPEPPVALSGRGMTTGLRYKIIGTVLQAAIIELDPGQMIFSESGGMSWMSGNVQMNTNSGGGIGKMFKRAFSGESLFIV
DFTVAGGTGLIGFASEMPGKIVPLHLAPGQEIIMQKDSFMCAEKSVQLDIHFRRKLGAGLFGGEGFIMQRATGPGVVFAE
LDGEVVEYYLQPGQVMKVDTGHVAMYEPSVQFDIEMVRGFKNILFGGEGLFLATLRGPGKVWLQTMPVMNVAKKLAEYMP
ASGGGGSAGGNIIGSILGGD
>Mature_340_residues
MQLPSMLHIFVLAFEERVMSDNDYRPKFDPQTGQPIPNQPQGGYPPPPPQGGYPPPPPQPNYGAPAAGGYTMASEPGRPL
DLPEPPVALSGRGMTTGLRYKIIGTVLQAAIIELDPGQMIFSESGGMSWMSGNVQMNTNSGGGIGKMFKRAFSGESLFIV
DFTVAGGTGLIGFASEMPGKIVPLHLAPGQEIIMQKDSFMCAEKSVQLDIHFRRKLGAGLFGGEGFIMQRATGPGVVFAE
LDGEVVEYYLQPGQVMKVDTGHVAMYEPSVQFDIEMVRGFKNILFGGEGLFLATLRGPGKVWLQTMPVMNVAKKLAEYMP
ASGGGGSAGGNIIGSILGGD

Specific function: Unknown

COG id: COG2013

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002838
- InterPro:   IPR016031 [H]

Pfam domain/function: PF01987 DUF124 [H]

EC number: NA

Molecular weight: Translated: 36117; Mature: 36117

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLPSMLHIFVLAFEERVMSDNDYRPKFDPQTGQPIPNQPQGGYPPPPPQGGYPPPPPQP
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NYGAPAAGGYTMASEPGRPLDLPEPPVALSGRGMTTGLRYKIIGTVLQAAIIELDPGQMI
CCCCCCCCCEEECCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHEECCCCCEE
FSESGGMSWMSGNVQMNTNSGGGIGKMFKRAFSGESLFIVDFTVAGGTGLIGFASEMPGK
EECCCCCEEEECCEEEECCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCEEEEHHCCCCC
IVPLHLAPGQEIIMQKDSFMCAEKSVQLDIHFRRKLGAGLFGGEGFIMQRATGPGVVFAE
EEEEEECCCHHEEEECCCCEEECCCEEEEEEEHHHHCCCEECCCCEEEEECCCCCEEEEE
LDGEVVEYYLQPGQVMKVDTGHVAMYEPSVQFDIEMVRGFKNILFGGEGLFLATLRGPGK
CCCCEEHEEECCCCEEEEECCEEEEECCCCEEHHHHHHHHHHHEECCCCEEEEEECCCCE
VWLQTMPVMNVAKKLAEYMPASGGGGSAGGNIIGSILGGD
EEEEECCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCC
>Mature Secondary Structure
MQLPSMLHIFVLAFEERVMSDNDYRPKFDPQTGQPIPNQPQGGYPPPPPQGGYPPPPPQP
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
NYGAPAAGGYTMASEPGRPLDLPEPPVALSGRGMTTGLRYKIIGTVLQAAIIELDPGQMI
CCCCCCCCCEEECCCCCCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHEECCCCCEE
FSESGGMSWMSGNVQMNTNSGGGIGKMFKRAFSGESLFIVDFTVAGGTGLIGFASEMPGK
EECCCCCEEEECCEEEECCCCCCHHHHHHHHHCCCEEEEEEEEECCCCCEEEEHHCCCCC
IVPLHLAPGQEIIMQKDSFMCAEKSVQLDIHFRRKLGAGLFGGEGFIMQRATGPGVVFAE
EEEEEECCCHHEEEECCCCEEECCCEEEEEEEHHHHCCCEECCCCEEEEECCCCCEEEEE
LDGEVVEYYLQPGQVMKVDTGHVAMYEPSVQFDIEMVRGFKNILFGGEGLFLATLRGPGK
CCCCEEHEEECCCCEEEEECCEEEEECCCCEEHHHHHHHHHHHEECCCCEEEEEECCCCE
VWLQTMPVMNVAKKLAEYMPASGGGGSAGGNIIGSILGGD
EEEEECCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA