| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900856
Identifier: 159900856
GI number: 159900856
Start: 5551875
End: 5552456
Strand: Reverse
Name: 159900856
Synonym: Haur_4343
Alternate gene names: NA
Gene position: 5552456-5551875 (Counterclockwise)
Preceding gene: 159900857
Following gene: 159900855
Centisome position: 87.49
GC content: 47.77
Gene sequence:
>582_bases ATGAGCAAGCGTCAATCCAAGCGCCCAACTGGCGAGGAATTAGCTAAAATTCGCGAACATAATGCCCAAGTAGCGCAAAC CCAAGCGCTTGATCTGGTTTGGGGCATCAAAGCCGAGTTGCCAAGCAATCAACATGGCGAGTTGCACCCTGATCAAATTA AACGCATTTTGAAAATTTCAATTTTTGATATTTGGATTCGCTTAGCCTTTGGGGGATTCTTCCTGGTGTTTGCGCTGACC CAGCGTACCGATTCTTGGCAATTTTGGGTTCCTTTGGCAATTGCCTTGTTTCCCTTGGTTAGCGCGATCAACGGAGCACT TGCCCGTCAGCGACTCAATAAAGCCAAAGTTGAAACGCTCGAAGGCAGTGTAAACGAAGTCAAAGTGCATCGTTCCGAGG CAGTTTCGGCCACCTTGCACCGCGATAGCTTATATATGTTTTTGCTGAACGACCAACACAGTAAAACCTTGCCTAAGGCC AACCAAGCCTACCGTTTTTATGTGGCATTTGGGGTGATTCGCCCAGGAATTGTTGTCGCAATCGAGGAATTAGATCATCT TGCTGCGTCAGCCGACGCATAA
Upstream 100 bases:
>100_bases CCAAATTGGGCAACCAACCACTCCAGGTTGGCCAACCTTACACAATTTATGTAGCCAAGGGTGTTTCACGCATGGGCATT ATCGTGGCGGTTGAAACAGC
Downstream 100 bases:
>100_bases TGTGAAGGAGTATTGCAATGCTTGATATTCGTTTATTTCGTGAACAACCCGAGTTGGTACGCGAAGGCTTTGCCAAAGTT GGTCGTGATCCAGGTTTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MSKRQSKRPTGEELAKIREHNAQVAQTQALDLVWGIKAELPSNQHGELHPDQIKRILKISIFDIWIRLAFGGFFLVFALT QRTDSWQFWVPLAIALFPLVSAINGALARQRLNKAKVETLEGSVNEVKVHRSEAVSATLHRDSLYMFLLNDQHSKTLPKA NQAYRFYVAFGVIRPGIVVAIEELDHLAASADA
Sequences:
>Translated_193_residues MSKRQSKRPTGEELAKIREHNAQVAQTQALDLVWGIKAELPSNQHGELHPDQIKRILKISIFDIWIRLAFGGFFLVFALT QRTDSWQFWVPLAIALFPLVSAINGALARQRLNKAKVETLEGSVNEVKVHRSEAVSATLHRDSLYMFLLNDQHSKTLPKA NQAYRFYVAFGVIRPGIVVAIEELDHLAASADA >Mature_192_residues SKRQSKRPTGEELAKIREHNAQVAQTQALDLVWGIKAELPSNQHGELHPDQIKRILKISIFDIWIRLAFGGFFLVFALTQ RTDSWQFWVPLAIALFPLVSAINGALARQRLNKAKVETLEGSVNEVKVHRSEAVSATLHRDSLYMFLLNDQHSKTLPKAN QAYRFYVAFGVIRPGIVVAIEELDHLAASADA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21709; Mature: 21578
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRQSKRPTGEELAKIREHNAQVAQTQALDLVWGIKAELPSNQHGELHPDQIKRILKIS CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH IFDIWIRLAFGGFFLVFALTQRTDSWQFWVPLAIALFPLVSAINGALARQRLNKAKVETL HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGSVNEVKVHRSEAVSATLHRDSLYMFLLNDQHSKTLPKANQAYRFYVAFGVIRPGIVVA CCCHHHHHHHHHHHHHHHEECCEEEEEEEECCCCCCCCCCCHHEEEEEEEHHHCCCCEEE IEELDHLAASADA HHHHHHHHHCCCC >Mature Secondary Structure SKRQSKRPTGEELAKIREHNAQVAQTQALDLVWGIKAELPSNQHGELHPDQIKRILKIS CCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH IFDIWIRLAFGGFFLVFALTQRTDSWQFWVPLAIALFPLVSAINGALARQRLNKAKVETL HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGSVNEVKVHRSEAVSATLHRDSLYMFLLNDQHSKTLPKANQAYRFYVAFGVIRPGIVVA CCCHHHHHHHHHHHHHHHEECCEEEEEEEECCCCCCCCCCCHHEEEEEEEHHHCCCCEEE IEELDHLAASADA HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA