| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is pknG [H]
Identifier: 159900833
GI number: 159900833
Start: 5515906
End: 5517678
Strand: Direct
Name: pknG [H]
Synonym: Haur_4320
Alternate gene names: 159900833
Gene position: 5515906-5517678 (Clockwise)
Preceding gene: 159900832
Following gene: 159900835
Centisome position: 86.91
GC content: 49.86
Gene sequence:
>1773_bases ATGCAATGTGCTGCTTGTGGCGCGACCACCACCAATGCCCATCAACGAATCTGTGCTCAATGCAACGCACCACTACCTCA ACTGTTGGTAGCTGGTGCGTTGGTGATGAACCAATATCGGGTAGTTCAGCCCTTACGTGAGGGCGGCACAGGCCAAATCT ACCTCGCTGAAGATACCCGCACCTTTGATCGTAAGTGTATTTTGAAACGCACGATTCTGAAGGGTGGTAATGAGTCACGG CGGCTGTTCGCCACTGAGGCTGAATTACTGACGCGTCTGCGGCATCCTCAAATTCCCCAAGTCTTTGCTTATTTTGAGGA TGCCGGGGTTGCCACAATTGTGATGGAATATGTGGCTGGGCGTGATTTGGAGCATGGGCTAAGCCAAACCTTAGTCGATG GCACATTTATGGCAGGCAAGCCGCGTCCATTCGAGCAAGTGCTACGTGATGCAATTGTCGTCTGTAAAATTTTAGAATAC CTGCATGCCCTCAAACCAGCACTGGTTCACGGCGATATCAAGCCCGCCAATTTGATTCGCGATCGTGATAGCAACGAGCT TTTTTTGGTCGATTTTGGCGCGGCAGCGACCAGCGGCGTAGGCCAAACCTATGGCACGCCTGGCTATGCAGCCCCTGAGC AATATCGCAATCAGCGCTATCCAGCCAGTGATATTTATAGTTTAGCAGCCACAATTTATCATTTACTAACTGATGATGAT CCATGTGAACACCCGCTGCGATTCCCCAAACTGACCAGCCTTTCGCCCCGCATGCAGCAAGTGCTTGGGCGGGCACTCCA CGATGATTTAAGTCAACGGCCAAATGCCACAGTTTTCCGCGATTTGCTTGAAGAAACCCTTGAGCCAACCCTTGTCCAGC CATTTAAATTCCCGAGCGGCGTAACCCCACATACTGGTTACGACCTTGCACAGGCAATTCAAGCCGATTGGGGTTATGGC TTGCATGCCTTGGTCAATGGCGATCTCAACACGTGGTTGCGCCAACATCAACAAACCGAGTTGGCGATTAAAGTCCATCG GATGCTGGTGCAAAATGAACGCCCCGAGCGCGTGCTCGATTTTCTGGTTGGCAGTTTAGCACCCAACTTGTTGGCGGCAG AAGTCAAATTTGAATACAATACCCTGCTGTTGCCACTCGATGGAATGAGCGCCACCCCATTAACTGTGACCGCCCGCAAT CGTGCTGCCCACATCAAAGCCGTTGATGCCCCAGGTTGGTTGCAAATAGGGCCAAAAGAACTCTATGTCGTGCCCGAACA ACCCCAACAATTTCAATTTGGCCTCGATCTTGCCCGCAACCCCAAGCCTGGGCAAACCGCCAGCGTAAGCTTTGAGATTC GCACCAGTGAGGAAAAACCACAACGGCGCAAATTAAAAATCCAATTAGCCCAAGGTTACTTGCCCAAACCCGACACTGGT GAGTTATGGCCGTTGATTGCTGGCCTTGGCGGTGGCGCGGTTTTGCTCAGCATTGTGCTGGCAGTAATCTATCATCCCAA CAATACCTTGTTGATTGAAGCGGCGATTGGCTCGTTGATTGGCATCATTTGGACGATTATATTGAGCGAACGCTCAACCG AAGTGGTGCTTCATATCTTATTAAGTATTGGCGGGGCCATATTAGCTGGCATTATTTATGCAATTTATATTCTCGGTGCG TTTAATCCTTTTTCCTTAGGAGCATTTTTCTATGCTTTGGGTGGTAGCTTAGCCTGTAACACTATCTATCACTACTTTTT CAAACACTTCTAA
Upstream 100 bases:
>100_bases CAATTTTAGCCACCGAGCAACGCCATATCTAGCCACCTTTTAGGCTGACTTACGTAGACGTTTATTATAAATTAAAAGCC TTTGATTTTGAGATCATTCT
Downstream 100 bases:
>100_bases AACACCAAATCCAGCCAACGAATTGGCTGGATTTGGGTCGATTTGGTGGAGATGGCGGGAATCGAACCCGCGTCCAAAAA GTTAAACCGCAAGCATCTAC
Product: serine/threonine protein kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 590; Mature: 590
Protein sequence:
>590_residues MQCAACGATTTNAHQRICAQCNAPLPQLLVAGALVMNQYRVVQPLREGGTGQIYLAEDTRTFDRKCILKRTILKGGNESR RLFATEAELLTRLRHPQIPQVFAYFEDAGVATIVMEYVAGRDLEHGLSQTLVDGTFMAGKPRPFEQVLRDAIVVCKILEY LHALKPALVHGDIKPANLIRDRDSNELFLVDFGAAATSGVGQTYGTPGYAAPEQYRNQRYPASDIYSLAATIYHLLTDDD PCEHPLRFPKLTSLSPRMQQVLGRALHDDLSQRPNATVFRDLLEETLEPTLVQPFKFPSGVTPHTGYDLAQAIQADWGYG LHALVNGDLNTWLRQHQQTELAIKVHRMLVQNERPERVLDFLVGSLAPNLLAAEVKFEYNTLLLPLDGMSATPLTVTARN RAAHIKAVDAPGWLQIGPKELYVVPEQPQQFQFGLDLARNPKPGQTASVSFEIRTSEEKPQRRKLKIQLAQGYLPKPDTG ELWPLIAGLGGGAVLLSIVLAVIYHPNNTLLIEAAIGSLIGIIWTIILSERSTEVVLHILLSIGGAILAGIIYAIYILGA FNPFSLGAFFYALGGSLACNTIYHYFFKHF
Sequences:
>Translated_590_residues MQCAACGATTTNAHQRICAQCNAPLPQLLVAGALVMNQYRVVQPLREGGTGQIYLAEDTRTFDRKCILKRTILKGGNESR RLFATEAELLTRLRHPQIPQVFAYFEDAGVATIVMEYVAGRDLEHGLSQTLVDGTFMAGKPRPFEQVLRDAIVVCKILEY LHALKPALVHGDIKPANLIRDRDSNELFLVDFGAAATSGVGQTYGTPGYAAPEQYRNQRYPASDIYSLAATIYHLLTDDD PCEHPLRFPKLTSLSPRMQQVLGRALHDDLSQRPNATVFRDLLEETLEPTLVQPFKFPSGVTPHTGYDLAQAIQADWGYG LHALVNGDLNTWLRQHQQTELAIKVHRMLVQNERPERVLDFLVGSLAPNLLAAEVKFEYNTLLLPLDGMSATPLTVTARN RAAHIKAVDAPGWLQIGPKELYVVPEQPQQFQFGLDLARNPKPGQTASVSFEIRTSEEKPQRRKLKIQLAQGYLPKPDTG ELWPLIAGLGGGAVLLSIVLAVIYHPNNTLLIEAAIGSLIGIIWTIILSERSTEVVLHILLSIGGAILAGIIYAIYILGA FNPFSLGAFFYALGGSLACNTIYHYFFKHF >Mature_590_residues MQCAACGATTTNAHQRICAQCNAPLPQLLVAGALVMNQYRVVQPLREGGTGQIYLAEDTRTFDRKCILKRTILKGGNESR RLFATEAELLTRLRHPQIPQVFAYFEDAGVATIVMEYVAGRDLEHGLSQTLVDGTFMAGKPRPFEQVLRDAIVVCKILEY LHALKPALVHGDIKPANLIRDRDSNELFLVDFGAAATSGVGQTYGTPGYAAPEQYRNQRYPASDIYSLAATIYHLLTDDD PCEHPLRFPKLTSLSPRMQQVLGRALHDDLSQRPNATVFRDLLEETLEPTLVQPFKFPSGVTPHTGYDLAQAIQADWGYG LHALVNGDLNTWLRQHQQTELAIKVHRMLVQNERPERVLDFLVGSLAPNLLAAEVKFEYNTLLLPLDGMSATPLTVTARN RAAHIKAVDAPGWLQIGPKELYVVPEQPQQFQFGLDLARNPKPGQTASVSFEIRTSEEKPQRRKLKIQLAQGYLPKPDTG ELWPLIAGLGGGAVLLSIVLAVIYHPNNTLLIEAAIGSLIGIIWTIILSERSTEVVLHILLSIGGAILAGIIYAIYILGA FNPFSLGAFFYALGGSLACNTIYHYFFKHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Homo sapiens, GI83627721, Length=287, Percent_Identity=27.1777003484321, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI225637562, Length=211, Percent_Identity=29.8578199052133, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI41281753, Length=212, Percent_Identity=29.7169811320755, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI225637560, Length=212, Percent_Identity=29.7169811320755, Blast_Score=75, Evalue=2e-13, Organism=Homo sapiens, GI225735561, Length=291, Percent_Identity=27.1477663230241, Blast_Score=73, Evalue=6e-13, Organism=Homo sapiens, GI41872673, Length=212, Percent_Identity=32.5471698113208, Blast_Score=73, Evalue=7e-13, Organism=Homo sapiens, GI217330634, Length=259, Percent_Identity=27.4131274131274, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI5453978, Length=209, Percent_Identity=30.622009569378, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI148612818, Length=221, Percent_Identity=28.0542986425339, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI10835242, Length=221, Percent_Identity=28.0542986425339, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI7657214, Length=161, Percent_Identity=30.4347826086957, Blast_Score=67, Evalue=6e-11, Organism=Homo sapiens, GI4502553, Length=214, Percent_Identity=30.3738317757009, Blast_Score=67, Evalue=6e-11, Organism=Homo sapiens, GI148839316, Length=198, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17539480, Length=226, Percent_Identity=31.4159292035398, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17505246, Length=222, Percent_Identity=28.8288288288288, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI71994328, Length=266, Percent_Identity=27.8195488721804, Blast_Score=75, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17538163, Length=251, Percent_Identity=28.2868525896414, Blast_Score=69, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17542634, Length=217, Percent_Identity=26.7281105990783, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17542632, Length=217, Percent_Identity=26.7281105990783, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI115533246, Length=215, Percent_Identity=26.046511627907, Blast_Score=66, Evalue=5e-11, Organism=Caenorhabditis elegans, GI193208263, Length=213, Percent_Identity=26.2910798122066, Blast_Score=65, Evalue=7e-11, Organism=Caenorhabditis elegans, GI71997537, Length=217, Percent_Identity=26.7281105990783, Blast_Score=65, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6322682, Length=292, Percent_Identity=26.3698630136986, Blast_Score=76, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6320685, Length=217, Percent_Identity=30.8755760368664, Blast_Score=72, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322297, Length=266, Percent_Identity=26.3157894736842, Blast_Score=71, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6325053, Length=224, Percent_Identity=25.8928571428571, Blast_Score=70, Evalue=7e-13, Organism=Saccharomyces cerevisiae, GI6321126, Length=282, Percent_Identity=27.6595744680851, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6319328, Length=254, Percent_Identity=26.3779527559055, Blast_Score=68, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6325104, Length=198, Percent_Identity=28.2828282828283, Blast_Score=67, Evalue=5e-12, Organism=Drosophila melanogaster, GI17137774, Length=214, Percent_Identity=31.3084112149533, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI281361563, Length=215, Percent_Identity=29.3023255813954, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI21356423, Length=215, Percent_Identity=29.3023255813954, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017442 - InterPro: IPR008271 [H]
Pfam domain/function: PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 65163; Mature: 65163
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQCAACGATTTNAHQRICAQCNAPLPQLLVAGALVMNQYRVVQPLREGGTGQIYLAEDTR CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC TFDRKCILKRTILKGGNESRRLFATEAELLTRLRHPQIPQVFAYFEDAGVATIVMEYVAG HHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHC RDLEHGLSQTLVDGTFMAGKPRPFEQVLRDAIVVCKILEYLHALKPALVHGDIKPANLIR CCHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHH DRDSNELFLVDFGAAATSGVGQTYGTPGYAAPEQYRNQRYPASDIYSLAATIYHLLTDDD CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCC PCEHPLRFPKLTSLSPRMQQVLGRALHDDLSQRPNATVFRDLLEETLEPTLVQPFKFPSG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEECCCCCCCC VTPHTGYDLAQAIQADWGYGLHALVNGDLNTWLRQHQQTELAIKVHRMLVQNERPERVLD CCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH FLVGSLAPNLLAAEVKFEYNTLLLPLDGMSATPLTVTARNRAAHIKAVDAPGWLQIGPKE HHHHHHCCCCEEEEEEEEECEEEEEECCCCCCCEEEEECCCEEEEEEECCCCCEEECCCE LYVVPEQPQQFQFGLDLARNPKPGQTASVSFEIRTSEEKPQRRKLKIQLAQGYLPKPDTG EEEECCCCCHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHEEEEEECCCCCCCCCC ELWPLIAGLGGGAVLLSIVLAVIYHPNNTLLIEAAIGSLIGIIWTIILSERSTEVVLHIL CHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHH LSIGGAILAGIIYAIYILGAFNPFSLGAFFYALGGSLACNTIYHYFFKHF HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MQCAACGATTTNAHQRICAQCNAPLPQLLVAGALVMNQYRVVQPLREGGTGQIYLAEDTR CCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCC TFDRKCILKRTILKGGNESRRLFATEAELLTRLRHPQIPQVFAYFEDAGVATIVMEYVAG HHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHC RDLEHGLSQTLVDGTFMAGKPRPFEQVLRDAIVVCKILEYLHALKPALVHGDIKPANLIR CCHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHH DRDSNELFLVDFGAAATSGVGQTYGTPGYAAPEQYRNQRYPASDIYSLAATIYHLLTDDD CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHCCCC PCEHPLRFPKLTSLSPRMQQVLGRALHDDLSQRPNATVFRDLLEETLEPTLVQPFKFPSG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEECCCCCCCC VTPHTGYDLAQAIQADWGYGLHALVNGDLNTWLRQHQQTELAIKVHRMLVQNERPERVLD CCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH FLVGSLAPNLLAAEVKFEYNTLLLPLDGMSATPLTVTARNRAAHIKAVDAPGWLQIGPKE HHHHHHCCCCEEEEEEEEECEEEEEECCCCCCCEEEEECCCEEEEEEECCCCCEEECCCE LYVVPEQPQQFQFGLDLARNPKPGQTASVSFEIRTSEEKPQRRKLKIQLAQGYLPKPDTG EEEECCCCCHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHEEEEEECCCCCCCCCC ELWPLIAGLGGGAVLLSIVLAVIYHPNNTLLIEAAIGSLIGIIWTIILSERSTEVVLHIL CHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHH LSIGGAILAGIIYAIYILGAFNPFSLGAFFYALGGSLACNTIYHYFFKHF HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11234002 [H]