Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900785

Identifier: 159900785

GI number: 159900785

Start: 5453473

End: 5454909

Strand: Direct

Name: 159900785

Synonym: Haur_4272

Alternate gene names: NA

Gene position: 5453473-5454909 (Clockwise)

Preceding gene: 159900784

Following gene: 159900786

Centisome position: 85.93

GC content: 47.39

Gene sequence:

>1437_bases
ATGCAACGATTTTTTGCAACGATCGATACATATGCCAAAGCGCTGCTTACAACAATGATTGTGGGCTATATCGGGGTATT
CGCTACACTGTCGTGTCTAAAATTGGCATGGTTTCGCCAAGGCTTCGATATGGCGGGCAACGAGCAAACGATTTGGAATA
CCTTGCATGGGCGGCCATTCCAAATTTCGGTGTTTGCCATGATGCGCTACGATTTTGATGATGGCCCTGTGTTATTGCAA
TTGCCCTTAGCATTATTGTATGGCATATATCAATCGCCCTATACGCTGCTTGTGTTGCAAACAATTGCTTTAGGCATTGC
TGCTTGGCCATTGTATGCGATTGTGCGTGATCTTTTGCCAAAGCCATGGCATGCCTTGGTGATTGCTGCCATTTATTTAT
TACACCCCACAACTCAGCATATCAATATGTACGAGTTTCAATTGCGCTCATTTATGATTCCATTTGCCTTGGCAGCATTA
TTATATTTGCGCCGTGAACGCTTGGGATTGTATTGTTTATTTCTATTTTTGATGATGTGCACCAAAACTGAGGCAGGTTT
TACGTTAATTGCCTTTGGTTTATATGCAGCTTGGCAGCGCAAGCCTTGGAAATTTATTGCATTTCCTTTGGTGCTAGGGC
CAGCCTGGGTTGCGGTGGCTTTGGGCGTAATTGTTCCAGCCTTCAGCGAGGGTAATTTTATTGCTGATATTTACAGTTAT
GGCAGGCTTGGCAAAACTGTTGGCGATGTGATCACAACTATGCTGACCAATCCAGCCCTTGCTTTTAGCGTCATGACCGA
GCCGCCCAAACTCAAATATTTGTGGCAATTGTTTGGGCTTGGCGGCTTTTTGGCCTTGCTCAGCCCAACCTTGCTGTTGG
CATTACCAGTTTTAGCGCTCAACTTAATCTCGCCCAATGCAGTCCAATTCAGCCTAAATTATCAATATGGCTCGTTAGTT
TATCCATTTTTGCTCGTGGCCTCGGTCGAAGGTTTGCTGAATCTCACCCGCTGGACAGTGCGCAACTCGCAATGGCGCGA
ACGGGCAGTGCATGGCGCGGTGCTGGTTTTATTGCTGATTGGGATTATTGGTAATTTGACCTTGAATAATGTGGTAAAAA
CCGCTTTGAGCAACCGCGAAAATCCAACACGGGTAGCCGATGCCCGGGCAATTTTGGCTCAAGTGCCTGCCGATGCCGCT
GTTGCCGCCAGCACCTTTCTGGCACCACACCTCGCCCAGCGCCAAGAAATCTACTTCTTTCCAGGCAATAAATCGTATCC
CGCTGAATATATTGAGCGAGCCGAGTATTTGGTGTTTGATCGGCGGCCACCAGGCAATAGCGCCGAAACTCGCGCTGCAA
TCGAGCGCTATTTGAACGATCCTGACTGGGTGATTGTGGCCGAGGCTGGCGATTTTGCCTTATTAAAGCAGCAGTAA

Upstream 100 bases:

>100_bases
AAACAATCTGTGCAATCTGTGGCTAAAATAGCCTTCGTGTCCTTTGTGCCCTTCGTGGATCAAACCCAATCCCCAAATCC
CTAGCTAATACGGAACAACA

Downstream 100 bases:

>100_bases
CCGAAACCACGAAGGACACGAAGCGCACAAAGGGGCTAGGATTTAGGAACTAAATAAAGGTCAGTTTGTTTAAGGCAGAG
GCGCAGAGAACGAAAGGATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MQRFFATIDTYAKALLTTMIVGYIGVFATLSCLKLAWFRQGFDMAGNEQTIWNTLHGRPFQISVFAMMRYDFDDGPVLLQ
LPLALLYGIYQSPYTLLVLQTIALGIAAWPLYAIVRDLLPKPWHALVIAAIYLLHPTTQHINMYEFQLRSFMIPFALAAL
LYLRRERLGLYCLFLFLMMCTKTEAGFTLIAFGLYAAWQRKPWKFIAFPLVLGPAWVAVALGVIVPAFSEGNFIADIYSY
GRLGKTVGDVITTMLTNPALAFSVMTEPPKLKYLWQLFGLGGFLALLSPTLLLALPVLALNLISPNAVQFSLNYQYGSLV
YPFLLVASVEGLLNLTRWTVRNSQWRERAVHGAVLVLLLIGIIGNLTLNNVVKTALSNRENPTRVADARAILAQVPADAA
VAASTFLAPHLAQRQEIYFFPGNKSYPAEYIERAEYLVFDRRPPGNSAETRAAIERYLNDPDWVIVAEAGDFALLKQQ

Sequences:

>Translated_478_residues
MQRFFATIDTYAKALLTTMIVGYIGVFATLSCLKLAWFRQGFDMAGNEQTIWNTLHGRPFQISVFAMMRYDFDDGPVLLQ
LPLALLYGIYQSPYTLLVLQTIALGIAAWPLYAIVRDLLPKPWHALVIAAIYLLHPTTQHINMYEFQLRSFMIPFALAAL
LYLRRERLGLYCLFLFLMMCTKTEAGFTLIAFGLYAAWQRKPWKFIAFPLVLGPAWVAVALGVIVPAFSEGNFIADIYSY
GRLGKTVGDVITTMLTNPALAFSVMTEPPKLKYLWQLFGLGGFLALLSPTLLLALPVLALNLISPNAVQFSLNYQYGSLV
YPFLLVASVEGLLNLTRWTVRNSQWRERAVHGAVLVLLLIGIIGNLTLNNVVKTALSNRENPTRVADARAILAQVPADAA
VAASTFLAPHLAQRQEIYFFPGNKSYPAEYIERAEYLVFDRRPPGNSAETRAAIERYLNDPDWVIVAEAGDFALLKQQ
>Mature_478_residues
MQRFFATIDTYAKALLTTMIVGYIGVFATLSCLKLAWFRQGFDMAGNEQTIWNTLHGRPFQISVFAMMRYDFDDGPVLLQ
LPLALLYGIYQSPYTLLVLQTIALGIAAWPLYAIVRDLLPKPWHALVIAAIYLLHPTTQHINMYEFQLRSFMIPFALAAL
LYLRRERLGLYCLFLFLMMCTKTEAGFTLIAFGLYAAWQRKPWKFIAFPLVLGPAWVAVALGVIVPAFSEGNFIADIYSY
GRLGKTVGDVITTMLTNPALAFSVMTEPPKLKYLWQLFGLGGFLALLSPTLLLALPVLALNLISPNAVQFSLNYQYGSLV
YPFLLVASVEGLLNLTRWTVRNSQWRERAVHGAVLVLLLIGIIGNLTLNNVVKTALSNRENPTRVADARAILAQVPADAA
VAASTFLAPHLAQRQEIYFFPGNKSYPAEYIERAEYLVFDRRPPGNSAETRAAIERYLNDPDWVIVAEAGDFALLKQQ

Specific function: Unknown

COG id: COG3463

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53522; Mature: 53522

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRFFATIDTYAKALLTTMIVGYIGVFATLSCLKLAWFRQGFDMAGNEQTIWNTLHGRPF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCE
QISVFAMMRYDFDDGPVLLQLPLALLYGIYQSPYTLLVLQTIALGIAAWPLYAIVRDLLP
EEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
KPWHALVIAAIYLLHPTTQHINMYEFQLRSFMIPFALAALLYLRRERLGLYCLFLFLMMC
CCHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKTEAGFTLIAFGLYAAWQRKPWKFIAFPLVLGPAWVAVALGVIVPAFSEGNFIADIYSY
HCCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
GRLGKTVGDVITTMLTNPALAFSVMTEPPKLKYLWQLFGLGGFLALLSPTLLLALPVLAL
HHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLISPNAVQFSLNYQYGSLVYPFLLVASVEGLLNLTRWTVRNSQWRERAVHGAVLVLLLI
HHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
GIIGNLTLNNVVKTALSNRENPTRVADARAILAQVPADAAVAASTFLAPHLAQRQEIYFF
HHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEE
PGNKSYPAEYIERAEYLVFDRRPPGNSAETRAAIERYLNDPDWVIVAEAGDFALLKQQ
CCCCCCCHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEECCC
>Mature Secondary Structure
MQRFFATIDTYAKALLTTMIVGYIGVFATLSCLKLAWFRQGFDMAGNEQTIWNTLHGRPF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCE
QISVFAMMRYDFDDGPVLLQLPLALLYGIYQSPYTLLVLQTIALGIAAWPLYAIVRDLLP
EEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
KPWHALVIAAIYLLHPTTQHINMYEFQLRSFMIPFALAALLYLRRERLGLYCLFLFLMMC
CCHHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKTEAGFTLIAFGLYAAWQRKPWKFIAFPLVLGPAWVAVALGVIVPAFSEGNFIADIYSY
HCCCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
GRLGKTVGDVITTMLTNPALAFSVMTEPPKLKYLWQLFGLGGFLALLSPTLLLALPVLAL
HHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NLISPNAVQFSLNYQYGSLVYPFLLVASVEGLLNLTRWTVRNSQWRERAVHGAVLVLLLI
HHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
GIIGNLTLNNVVKTALSNRENPTRVADARAILAQVPADAAVAASTFLAPHLAQRQEIYFF
HHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEE
PGNKSYPAEYIERAEYLVFDRRPPGNSAETRAAIERYLNDPDWVIVAEAGDFALLKQQ
CCCCCCCHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA