| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is mshA [H]
Identifier: 159900784
GI number: 159900784
Start: 5452131
End: 5453240
Strand: Direct
Name: mshA [H]
Synonym: Haur_4271
Alternate gene names: 159900784
Gene position: 5452131-5453240 (Clockwise)
Preceding gene: 159900783
Following gene: 159900785
Centisome position: 85.91
GC content: 53.42
Gene sequence:
>1110_bases ATGCATATTATTCACTACAATCTGACGACTACTAGCAAAGTCGGCGGGGTTGAGAGTTTTGTTTGGGAATTGGCGCAGCA GCAAGTTCGGCTCGGCCATCGGGTGACGATTGTTGGTGGTCAAGGCCCAATTCAACGGCCAAATCAGGGCTTGCGGGTGC TAAAATTCCCATTTATTGATCGGGCACGTTTGGCTTGGGGGCCGTTACGTCGCGCTTATGCTTGGCGCAAATTGGCCGAA CGCTTGTCGCTGCTGCCACGGGCTTGGCCTATTTTGAAAACTGCCGATTTGGTGCATATTCACAAGCCTTATGATTTGGT CGTGGCTCCATTGCTCAAACGCCATGGCATTCCCACGGCTTATCACGGCCATGGCGAAGATTTTTTTCGCGGCGATGTTC AGCTGATGCAGTCAGCCGCCGTGCTGCTTTCGTGCTCTAGCTACAATGCCCAAACCTTGCAGCAACATTATGGGCGCACG GCGAGCGTGGTCTATAACGGCGTTGATGTCGAGCATTTTCGACCTTTGGCGCTAGATCCAGCATTACGCCAAGCAATTGC TGGCGATGCTCAATGGTTATTGATGCATCCTGGGCGCATGATGCCTTGGAAAGGTCAGCGCGATGCAATTAGTGCCTTGA GTTTGCTCGATCACACCTATCATTTGGCCTTTTTAGGCGATGGCGAAACCCGCCAAGCCTTGGCTGACTATGCCCAACAA TTAGGCATTGCCGAACGCGTGCACTTTCTTGGCACAATTGCCCACAGCGAATTGCCGCGCTATTTGGCCTGCGCCGATTT GGTGCTTGGTACGAGTTATACATCAGAGACGTTTGGCATGGCCTTAGCCGAAGCCCAAGCCTGTGGCCGGCCCGTTATCG CCTCGTCGTGGCGTGGTTATGATGATGTGGTGCAAGCTGGCAGCACTGGCGAACGCTTTATCGCCCAAAATTCAGCCGAT TTAGCTCGCGTTATCAGCCAACTTTGCCACGATTCAGCCTATCGTGAGCAACTAGCGCGTGCTGGTCGCCAACGGGTGCA ACAATTGTTCCCGTGGTCGGCTGTCGCCGAGCGAGTTGAAGTGGTGTATGAGGGGTTAGTTAGTTGCTAG
Upstream 100 bases:
>100_bases GCAAACTGCGCGATTTGGCTTATCGGCTTGGTTTAGGCTTGCCTGCTTATTATTTTTACCGTGATTGGGTCAAGGGAACC TACGAATTGGTGCTGTGGTA
Downstream 100 bases:
>100_bases GGGTCAGGGGCCAGAGAATAGCGACGAGATTTAACGCAGAGACACAGAAAGCCAAAGGATGAATTATGAGGGATAAGGGA TGAAATTATAACAGGATTGG
Product: group 1 glycosyl transferase
Products: NA
Alternate protein names: N-acetylglucosamine-inositol-phosphate N-acetylglucosaminyltransferase; GlcNAc-Ins-P N-acetylglucosaminyltransferase [H]
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MHIIHYNLTTTSKVGGVESFVWELAQQQVRLGHRVTIVGGQGPIQRPNQGLRVLKFPFIDRARLAWGPLRRAYAWRKLAE RLSLLPRAWPILKTADLVHIHKPYDLVVAPLLKRHGIPTAYHGHGEDFFRGDVQLMQSAAVLLSCSSYNAQTLQQHYGRT ASVVYNGVDVEHFRPLALDPALRQAIAGDAQWLLMHPGRMMPWKGQRDAISALSLLDHTYHLAFLGDGETRQALADYAQQ LGIAERVHFLGTIAHSELPRYLACADLVLGTSYTSETFGMALAEAQACGRPVIASSWRGYDDVVQAGSTGERFIAQNSAD LARVISQLCHDSAYREQLARAGRQRVQQLFPWSAVAERVEVVYEGLVSC
Sequences:
>Translated_369_residues MHIIHYNLTTTSKVGGVESFVWELAQQQVRLGHRVTIVGGQGPIQRPNQGLRVLKFPFIDRARLAWGPLRRAYAWRKLAE RLSLLPRAWPILKTADLVHIHKPYDLVVAPLLKRHGIPTAYHGHGEDFFRGDVQLMQSAAVLLSCSSYNAQTLQQHYGRT ASVVYNGVDVEHFRPLALDPALRQAIAGDAQWLLMHPGRMMPWKGQRDAISALSLLDHTYHLAFLGDGETRQALADYAQQ LGIAERVHFLGTIAHSELPRYLACADLVLGTSYTSETFGMALAEAQACGRPVIASSWRGYDDVVQAGSTGERFIAQNSAD LARVISQLCHDSAYREQLARAGRQRVQQLFPWSAVAERVEVVYEGLVSC >Mature_369_residues MHIIHYNLTTTSKVGGVESFVWELAQQQVRLGHRVTIVGGQGPIQRPNQGLRVLKFPFIDRARLAWGPLRRAYAWRKLAE RLSLLPRAWPILKTADLVHIHKPYDLVVAPLLKRHGIPTAYHGHGEDFFRGDVQLMQSAAVLLSCSSYNAQTLQQHYGRT ASVVYNGVDVEHFRPLALDPALRQAIAGDAQWLLMHPGRMMPWKGQRDAISALSLLDHTYHLAFLGDGETRQALADYAQQ LGIAERVHFLGTIAHSELPRYLACADLVLGTSYTSETFGMALAEAQACGRPVIASSWRGYDDVVQAGSTGERFIAQNSAD LARVISQLCHDSAYREQLARAGRQRVQQLFPWSAVAERVEVVYEGLVSC
Specific function: Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway [H]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family. MshA subfamily [H]
Homologues:
Organism=Homo sapiens, GI11863130, Length=382, Percent_Identity=25.3926701570681, Blast_Score=72, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17532709, Length=388, Percent_Identity=23.7113402061856, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI24654571, Length=315, Percent_Identity=23.8095238095238, Blast_Score=70, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 - InterPro: IPR017814 - InterPro: IPR013534 [H]
Pfam domain/function: PF08323 Glyco_transf_5; PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.250 [H]
Molecular weight: Translated: 41108; Mature: 41108
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHIIHYNLTTTSKVGGVESFVWELAQQQVRLGHRVTIVGGQGPIQRPNQGLRVLKFPFID CEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEECCCCC RARLAWGPLRRAYAWRKLAERLSLLPRAWPILKTADLVHIHKPYDLVVAPLLKRHGIPTA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEECCCHHHHHHHHHHHCCCCCE YHGHGEDFFRGDVQLMQSAAVLLSCSSYNAQTLQQHYGRTASVVYNGVDVEHFRPLALDP ECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEECCCCHHHCCCCCCCH ALRQAIAGDAQWLLMHPGRMMPWKGQRDAISALSLLDHTYHLAFLGDGETRQALADYAQQ HHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHH LGIAERVHFLGTIAHSELPRYLACADLVLGTSYTSETFGMALAEAQACGRPVIASSWRGY HCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCH DDVVQAGSTGERFIAQNSADLARVISQLCHDSAYREQLARAGRQRVQQLFPWSAVAERVE HHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VVYEGLVSC HHHHHHHCC >Mature Secondary Structure MHIIHYNLTTTSKVGGVESFVWELAQQQVRLGHRVTIVGGQGPIQRPNQGLRVLKFPFID CEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEECCCCC RARLAWGPLRRAYAWRKLAERLSLLPRAWPILKTADLVHIHKPYDLVVAPLLKRHGIPTA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEECCCHHHHHHHHHHHCCCCCE YHGHGEDFFRGDVQLMQSAAVLLSCSSYNAQTLQQHYGRTASVVYNGVDVEHFRPLALDP ECCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEECCCCHHHCCCCCCCH ALRQAIAGDAQWLLMHPGRMMPWKGQRDAISALSLLDHTYHLAFLGDGETRQALADYAQQ HHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHH LGIAERVHFLGTIAHSELPRYLACADLVLGTSYTSETFGMALAEAQACGRPVIASSWRGY HCHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCH DDVVQAGSTGERFIAQNSADLARVISQLCHDSAYREQLARAGRQRVQQLFPWSAVAERVE HHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH VVYEGLVSC HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA