Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900747

Identifier: 159900747

GI number: 159900747

Start: 5396099

End: 5398249

Strand: Reverse

Name: 159900747

Synonym: Haur_4234

Alternate gene names: NA

Gene position: 5398249-5396099 (Counterclockwise)

Preceding gene: 159900748

Following gene: 159900744

Centisome position: 85.06

GC content: 47.61

Gene sequence:

>2151_bases
ATGGCGCGGAAACGGATCGTCGGAAACAGAATCGGATTTTATTTAATCTTAATTGGTATCCTGCTCAATTTGGGCACAGT
CAAAGCCCAACAGCCCCAATCTCAGCCAAAGCGGCTGCTCAGCTCAGCGACAGACAGGGCTTTTGAACCAACAACCATCC
AATCCTCGCCCTTAACCTTAACCAACAGCAGCGTGATTAGTGGCACCTGGGATACGAGCTTTGGCAATAGTTTAGCGACC
GCTGGCACGATCACCAAGTTGCATCTTGATGCCAATAATCGTTTGTATGTCGCTGGTAAATTCAATTACCTCAATGGGCA
ATTGTTTAATGGGCTAGCCGCATGGAATGGTACAACTTGGCAAGGCTATGGCTTGCAAGCCAATGATGTGGATACGATCA
ATGCCCTCGATAGCTACCAAAACCAATTGGTGGTGGCTGGGCGTTTTCGCCAATTGGCGAACCAAACCACGAATGGCCTT
GCCCGTTGGGATGGTAGCCAATTTCAAGCCTTTGGCACTGGCGTTAGTGGCATCAACGATTCATATCGCAACAATATTAT
TTCGCAGGTCTATGATATTGAAGTCCTGAGTGATACGCTGTATCTCGGTGGCAACTTTGATACATTTAATGGCCTCGATG
CCCACGGCACAGCCTACTGGCGACCGACCGGCTTTGGCGAGTTTGGCGATTTTAATGGCGTAATCAGCGATCTCGATGCA
ATTCCCAATACGCTTTTTGCTGGTGGCAGTGTAAGCCGCGTCAATCAAACCTCAATTCAAGGTTTAGGCTTATGGAATGG
CACAACCTGGCAAAACTCCAGCTTGCCAGGCTCAAATGCCGCCCGTGATCAAATAGGGCGAATTGGGACGACGCTCTATA
CCTGGGCCAATAACTATGATCCGCGACAAACCATGATGTATCGCTGGAATGCTAATCAGTGGCAAGCGTTTGGCAGCTGG
ATCGATGAATTTGTGCTTGGTGTGGCGCAAAGCAACGATTTATATGCCTATACTATCAGCGATCTATGGCGCTTAGTTGG
CAACCAATGGCAATTGGTCAATCTGCCAATGACGATCAACTCTATTAATACAGTTGTTGGCAATGACAATGGGTTGTATC
TCGCTGGTAATTTTGAAGTTGATGGCAACGCCGTGCAATTGGTGCATTGGAATGGTACAACGCTCACGCCACTTGCCAGC
ACCAGCGTTTATCCACGGCTTGATGAAATAACCGGCGTTCAAGGTCTGCCAATTATCAAACCAAATTGGCCGAATGTGCT
CAAGCAGTGGGATGGTCAAACCTGGCAAACAAGCTACGCATTACAGGGGATGGCTAGCCTTTTCGCCACCAGTGATGATC
GTGCCTATTTGGCTTACCCTTATCCATATCAAACCGCTGGTTCATTGAGCAGTTCGCTGTGGCAATTTGATTCGACTGGC
GCGTTGACTGCTCCCTTGCAATTGATTGGTCAGGCAACCACCTGGACGCTTTCAGGAACCGAGCTTTTGGCTAATGGCAT
AACGATGATTAACAGCCAACCAATCAGTGGGGCCGTGGCGCTGAATGGCACTGAATGGCGTGAATTAGGGCTAAACACCA
ATTTTCGCAAGATCTATTATGCCAATAATCGTATCTATGCGCTGATGATCACCCAAAACCATGATTGGTGGGAGATTGAT
ATTGACACTTGGAATGGCACTGCTTGGGTTGATTTTACTGGGTTGTTTGTACAAAGCAATGGCTCGATTCCACAATTTGT
AACCTGGCGCAATCAGCTGTATTTTACCAACGGCAATCAGTTGCATCGGCTCGAAAATACTGGCAATAGCATGGTATTTG
AGTTTGATGGTGCGCCATTGCAACTTGCCAACATCAACGATCGCTATTTATATGTTGGCGGGGCATTTAGCAAAGTCGGT
GAGCAACAGCTTGGTAGCATTGTGCGCTGGAATGGCAATAGCTGGCAAGCTCCAAGCCAAACGCCCAACGGCACAGTTGA
ACACATGGCAATTACCGAAAACTATCTCTATTTGAGTGGTAATTTTACCCATATTGGCGCAAACCCAAGTTTAGGTGTGG
CCAGCTTTCAGCTTGCCGCTGAACCTGAACCACTACCCTATCAATTGTTCATTCCCCAAGTTGTCAAATAA

Upstream 100 bases:

>100_bases
AATTACGAGGCAAGGTAGTAGTCATAGTTGATATGTTATAGTCCAACTACACCTGGCTAGGAATAGCTAGTGGCATGCAG
ATGCCTATTGGAGTTCAGCA

Downstream 100 bases:

>100_bases
TTTTAGTTAGCGACCCACGCTGCTTGGTAACTCAAGTAGCGTGGGTGCTGTTTGGTCTAAGCTTGGTTAAGTTGCTGGCG
AATCTGGGCTAAATACTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 716; Mature: 715

Protein sequence:

>716_residues
MARKRIVGNRIGFYLILIGILLNLGTVKAQQPQSQPKRLLSSATDRAFEPTTIQSSPLTLTNSSVISGTWDTSFGNSLAT
AGTITKLHLDANNRLYVAGKFNYLNGQLFNGLAAWNGTTWQGYGLQANDVDTINALDSYQNQLVVAGRFRQLANQTTNGL
ARWDGSQFQAFGTGVSGINDSYRNNIISQVYDIEVLSDTLYLGGNFDTFNGLDAHGTAYWRPTGFGEFGDFNGVISDLDA
IPNTLFAGGSVSRVNQTSIQGLGLWNGTTWQNSSLPGSNAARDQIGRIGTTLYTWANNYDPRQTMMYRWNANQWQAFGSW
IDEFVLGVAQSNDLYAYTISDLWRLVGNQWQLVNLPMTINSINTVVGNDNGLYLAGNFEVDGNAVQLVHWNGTTLTPLAS
TSVYPRLDEITGVQGLPIIKPNWPNVLKQWDGQTWQTSYALQGMASLFATSDDRAYLAYPYPYQTAGSLSSSLWQFDSTG
ALTAPLQLIGQATTWTLSGTELLANGITMINSQPISGAVALNGTEWRELGLNTNFRKIYYANNRIYALMITQNHDWWEID
IDTWNGTAWVDFTGLFVQSNGSIPQFVTWRNQLYFTNGNQLHRLENTGNSMVFEFDGAPLQLANINDRYLYVGGAFSKVG
EQQLGSIVRWNGNSWQAPSQTPNGTVEHMAITENYLYLSGNFTHIGANPSLGVASFQLAAEPEPLPYQLFIPQVVK

Sequences:

>Translated_716_residues
MARKRIVGNRIGFYLILIGILLNLGTVKAQQPQSQPKRLLSSATDRAFEPTTIQSSPLTLTNSSVISGTWDTSFGNSLAT
AGTITKLHLDANNRLYVAGKFNYLNGQLFNGLAAWNGTTWQGYGLQANDVDTINALDSYQNQLVVAGRFRQLANQTTNGL
ARWDGSQFQAFGTGVSGINDSYRNNIISQVYDIEVLSDTLYLGGNFDTFNGLDAHGTAYWRPTGFGEFGDFNGVISDLDA
IPNTLFAGGSVSRVNQTSIQGLGLWNGTTWQNSSLPGSNAARDQIGRIGTTLYTWANNYDPRQTMMYRWNANQWQAFGSW
IDEFVLGVAQSNDLYAYTISDLWRLVGNQWQLVNLPMTINSINTVVGNDNGLYLAGNFEVDGNAVQLVHWNGTTLTPLAS
TSVYPRLDEITGVQGLPIIKPNWPNVLKQWDGQTWQTSYALQGMASLFATSDDRAYLAYPYPYQTAGSLSSSLWQFDSTG
ALTAPLQLIGQATTWTLSGTELLANGITMINSQPISGAVALNGTEWRELGLNTNFRKIYYANNRIYALMITQNHDWWEID
IDTWNGTAWVDFTGLFVQSNGSIPQFVTWRNQLYFTNGNQLHRLENTGNSMVFEFDGAPLQLANINDRYLYVGGAFSKVG
EQQLGSIVRWNGNSWQAPSQTPNGTVEHMAITENYLYLSGNFTHIGANPSLGVASFQLAAEPEPLPYQLFIPQVVK
>Mature_715_residues
ARKRIVGNRIGFYLILIGILLNLGTVKAQQPQSQPKRLLSSATDRAFEPTTIQSSPLTLTNSSVISGTWDTSFGNSLATA
GTITKLHLDANNRLYVAGKFNYLNGQLFNGLAAWNGTTWQGYGLQANDVDTINALDSYQNQLVVAGRFRQLANQTTNGLA
RWDGSQFQAFGTGVSGINDSYRNNIISQVYDIEVLSDTLYLGGNFDTFNGLDAHGTAYWRPTGFGEFGDFNGVISDLDAI
PNTLFAGGSVSRVNQTSIQGLGLWNGTTWQNSSLPGSNAARDQIGRIGTTLYTWANNYDPRQTMMYRWNANQWQAFGSWI
DEFVLGVAQSNDLYAYTISDLWRLVGNQWQLVNLPMTINSINTVVGNDNGLYLAGNFEVDGNAVQLVHWNGTTLTPLAST
SVYPRLDEITGVQGLPIIKPNWPNVLKQWDGQTWQTSYALQGMASLFATSDDRAYLAYPYPYQTAGSLSSSLWQFDSTGA
LTAPLQLIGQATTWTLSGTELLANGITMINSQPISGAVALNGTEWRELGLNTNFRKIYYANNRIYALMITQNHDWWEIDI
DTWNGTAWVDFTGLFVQSNGSIPQFVTWRNQLYFTNGNQLHRLENTGNSMVFEFDGAPLQLANINDRYLYVGGAFSKVGE
QQLGSIVRWNGNSWQAPSQTPNGTVEHMAITENYLYLSGNFTHIGANPSLGVASFQLAAEPEPLPYQLFIPQVVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79072; Mature: 78941

Theoretical pI: Translated: 4.76; Mature: 4.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKRIVGNRIGFYLILIGILLNLGTVKAQQPQSQPKRLLSSATDRAFEPTTIQSSPLTL
CCCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCEEE
TNSSVISGTWDTSFGNSLATAGTITKLHLDANNRLYVAGKFNYLNGQLFNGLAAWNGTTW
ECCCEEECCCCCCCCCCEECCCEEEEEEECCCCEEEEEEEEEECCCHHHCCEEECCCCCE
QGYGLQANDVDTINALDSYQNQLVVAGRFRQLANQTTNGLARWDGSQFQAFGTGVSGIND
ECCCCCCCCCCHHHHHHHHCCCEEEEHHHHHHHHHCCCCCEECCCCCEEEEECCCCCCCH
SYRNNIISQVYDIEVLSDTLYLGGNFDTFNGLDAHGTAYWRPTGFGEFGDFNGVISDLDA
HHHHHHHHHHEEEEEEECEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHH
IPNTLFAGGSVSRVNQTSIQGLGLWNGTTWQNSSLPGSNAARDQIGRIGTTLYTWANNYD
CCCCEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCC
PRQTMMYRWNANQWQAFGSWIDEFVLGVAQSNDLYAYTISDLWRLVGNQWQLVNLPMTIN
CCCEEEEEECCCHHHHHHHHHHHHHHHEECCCCEEEEEHHHHHHHHCCCEEEEECCEEEC
SINTVVGNDNGLYLAGNFEVDGNAVQLVHWNGTTLTPLASTSVYPRLDEITGVQGLPIIK
CCEEEEECCCCEEEEEEEEECCCEEEEEEECCCEECCCCCCCCCCCHHHHCCCCCCCEEC
PNWPNVLKQWDGQTWQTSYALQGMASLFATSDDRAYLAYPYPYQTAGSLSSSLWQFDSTG
CCCHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHEECCCCC
ALTAPLQLIGQATTWTLSGTELLANGITMINSQPISGAVALNGTEWRELGLNTNFRKIYY
CEEHHHHHHCCCEEEEECCHHHHHCCEEEEECCCCCCEEEECCCCHHEECCCCCEEEEEE
ANNRIYALMITQNHDWWEIDIDTWNGTAWVDFTGLFVQSNGSIPQFVTWRNQLYFTNGNQ
ECCEEEEEEEECCCCEEEEEEECCCCEEEEEEEEEEEECCCCCCEEEEECCEEEEECCCE
LHRLENTGNSMVFEFDGAPLQLANINDRYLYVGGAFSKVGEQQLGSIVRWNGNSWQAPSQ
EEEEECCCCEEEEEECCCCEEEECCCCCEEEECCHHHHHHHHHHCCEEEECCCCCCCCCC
TPNGTVEHMAITENYLYLSGNFTHIGANPSLGVASFQLAAEPEPLPYQLFIPQVVK
CCCCCEEEEEEEEEEEEEECCEEEECCCCCCCEEEEEEECCCCCCCEEEECHHHCC
>Mature Secondary Structure 
ARKRIVGNRIGFYLILIGILLNLGTVKAQQPQSQPKRLLSSATDRAFEPTTIQSSPLTL
CCCCHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCEEE
TNSSVISGTWDTSFGNSLATAGTITKLHLDANNRLYVAGKFNYLNGQLFNGLAAWNGTTW
ECCCEEECCCCCCCCCCEECCCEEEEEEECCCCEEEEEEEEEECCCHHHCCEEECCCCCE
QGYGLQANDVDTINALDSYQNQLVVAGRFRQLANQTTNGLARWDGSQFQAFGTGVSGIND
ECCCCCCCCCCHHHHHHHHCCCEEEEHHHHHHHHHCCCCCEECCCCCEEEEECCCCCCCH
SYRNNIISQVYDIEVLSDTLYLGGNFDTFNGLDAHGTAYWRPTGFGEFGDFNGVISDLDA
HHHHHHHHHHEEEEEEECEEEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHH
IPNTLFAGGSVSRVNQTSIQGLGLWNGTTWQNSSLPGSNAARDQIGRIGTTLYTWANNYD
CCCCEECCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCC
PRQTMMYRWNANQWQAFGSWIDEFVLGVAQSNDLYAYTISDLWRLVGNQWQLVNLPMTIN
CCCEEEEEECCCHHHHHHHHHHHHHHHEECCCCEEEEEHHHHHHHHCCCEEEEECCEEEC
SINTVVGNDNGLYLAGNFEVDGNAVQLVHWNGTTLTPLASTSVYPRLDEITGVQGLPIIK
CCEEEEECCCCEEEEEEEEECCCEEEEEEECCCEECCCCCCCCCCCHHHHCCCCCCCEEC
PNWPNVLKQWDGQTWQTSYALQGMASLFATSDDRAYLAYPYPYQTAGSLSSSLWQFDSTG
CCCHHHHHHHCCCCEEHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHEECCCCC
ALTAPLQLIGQATTWTLSGTELLANGITMINSQPISGAVALNGTEWRELGLNTNFRKIYY
CEEHHHHHHCCCEEEEECCHHHHHCCEEEEECCCCCCEEEECCCCHHEECCCCCEEEEEE
ANNRIYALMITQNHDWWEIDIDTWNGTAWVDFTGLFVQSNGSIPQFVTWRNQLYFTNGNQ
ECCEEEEEEEECCCCEEEEEEECCCCEEEEEEEEEEEECCCCCCEEEEECCEEEEECCCE
LHRLENTGNSMVFEFDGAPLQLANINDRYLYVGGAFSKVGEQQLGSIVRWNGNSWQAPSQ
EEEEECCCCEEEEEECCCCEEEECCCCCEEEECCHHHHHHHHHHCCEEEECCCCCCCCCC
TPNGTVEHMAITENYLYLSGNFTHIGANPSLGVASFQLAAEPEPLPYQLFIPQVVK
CCCCCEEEEEEEEEEEEEECCEEEECCCCCCCEEEEEEECCCCCCCEEEECHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA