Click here to switch to the map view.

The map label for this gene is 159900736

Identifier: 159900736

GI number: 159900736

Start: 5383869

End: 5384216

Strand: Direct

Name: 159900736

Synonym: Haur_4223

Alternate gene names: NA

Gene position: 5383869-5384216 (Clockwise)

Preceding gene: 159900735

Following gene: 159900737

Centisome position: 84.83

GC content: 47.7

Gene sequence:

>348_bases
ATGCGTCATATCGTTGAGGACTTAATTCGGGTTGAAGGGGTTATCGGCAGCCTCTTAGTGGGCCGCGATGGTTTGGTTAT
CGCCAGCACTTTAATCGAAGATGAAGATGCTGAAGTATTGGGCGCGATGTCGGCAGCAGTGTTCGGCGAAATTGATAAAG
CGACCAAACGGATTGGGATTGGCACGTTGGTTGATGCAATTATTGATGCCAAAGATGGTTCGATTCTGTTGCTCGAAGCT
CGTGATGTGATTCTGACGGTGGTAACGCAACGAATGGTTAATCTTGGTTTGGTCAAGATTGAAATGCGCCGCGCTGCCAA
AAATATTAGCAAGGCCGTGCCGATTTAA

Upstream 100 bases:

>100_bases
CTAAGCAAGGACGCTGGCGTGAAGCGATGGATGAGTATGGCTGGGTGCTAAATAAACCACGTCGTTAACGCACCAAGCAA
CTGAAGAAAGGCTAGACCCT

Downstream 100 bases:

>100_bases
ATTTGTTCGATGTTTGATTTGCGAGCTACCTTGATTGGTGGCTCGCTTTTTTTATGGCCGCTTGGCTAAATATGCTACAA
TGCCCACGGTCGTGTAAACG

Product: roadblock/LC7 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MRHIVEDLIRVEGVIGSLLVGRDGLVIASTLIEDEDAEVLGAMSAAVFGEIDKATKRIGIGTLVDAIIDAKDGSILLLEA
RDVILTVVTQRMVNLGLVKIEMRRAAKNISKAVPI

Sequences:

>Translated_115_residues
MRHIVEDLIRVEGVIGSLLVGRDGLVIASTLIEDEDAEVLGAMSAAVFGEIDKATKRIGIGTLVDAIIDAKDGSILLLEA
RDVILTVVTQRMVNLGLVKIEMRRAAKNISKAVPI
>Mature_115_residues
MRHIVEDLIRVEGVIGSLLVGRDGLVIASTLIEDEDAEVLGAMSAAVFGEIDKATKRIGIGTLVDAIIDAKDGSILLLEA
RDVILTVVTQRMVNLGLVKIEMRRAAKNISKAVPI

Specific function: Unknown

COG id: COG2018

COG function: function code R; Uncharacterized distant relative of homeotic protein bithoraxoid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0310 and MJ1340 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004942 [H]

Pfam domain/function: PF03259 Robl_LC7 [H]

EC number: NA

Molecular weight: Translated: 12289; Mature: 12289

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHIVEDLIRVEGVIGSLLVGRDGLVIASTLIEDEDAEVLGAMSAAVFGEIDKATKRIGI
CHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GTLVDAIIDAKDGSILLLEARDVILTVVTQRMVNLGLVKIEMRRAAKNISKAVPI
HHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRHIVEDLIRVEGVIGSLLVGRDGLVIASTLIEDEDAEVLGAMSAAVFGEIDKATKRIGI
CHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GTLVDAIIDAKDGSILLLEARDVILTVVTQRMVNLGLVKIEMRRAAKNISKAVPI
HHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]