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The map label for this gene is 159900733

Identifier: 159900733

GI number: 159900733

Start: 5377415

End: 5377948

Strand: Direct

Name: 159900733

Synonym: Haur_4220

Alternate gene names: NA

Gene position: 5377415-5377948 (Clockwise)

Preceding gene: 159900732

Following gene: 159900734

Centisome position: 84.73

GC content: 52.43

Gene sequence:

>534_bases
ATGAACTCTCCCGTACTCGTCCTCAACCATAATTACGAGCCACTCAATATCTGCTCTGCACGTCGTGCCTTGATGCTTGT
GTTGGGTGGTAAAGCCGAAGTGTTGGAACACAACCACGCCGTGTTGCACACGACCAACGACACCATTGCTTGTCCGTCGG
TCATCCGACTGGGCCATATGATTCGTCGTCCCTTGCCCAATGTTAAGCTTTCTCGCCGTGAAATTTTCCGTCGCGATCAC
TACACCTGCCAATATTGTAATCGGAGCAGTGCTGATCTCACGCTTGACCATGTGTTGCCGCGCCATCGCGGTGGTGCCCA
TAGCTGGGAAAATCTGGTAAGCGCCTGCCGAACGTGTAATCATCGCAAAGGTGGGCGAACTCCCGAGGAGGCACGAATGC
GCTTAATTCGGCCACCCTTTCGCCCGTTTGCTAGCCCATACTATTTAATCGAACGCCGAATGCATGGGCTTGGTCTTGAA
GAATGGCGTAAATTTCTGCCTGCGTCCTTTCAGACTGTGGAGGACGATCAATAA

Upstream 100 bases:

>100_bases
GATTGGTTTTTGCTGAGAAACGTTGCCAAGGCGTAGGGGCAATGATACAATACCACGGGCAACTACATCGCATCTTCCAT
GTCGAAGGAGTCTGATCGCG

Downstream 100 bases:

>100_bases
GGAGTTGTGGTATGTTACAGCGCATAGCGGTGGTCGATGATTCGAGTGAATTTCAACAGTTAATTGATGTGATGTTGCAA
TACCTTGGCATTCAGGAAAT

Product: HNH endonuclease

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; HNH Endonuclease Domain-Containing Protein; HNH Endonuclease Domain Protein; Restriction Endonuclease; Hnh Endonuclease; HNH Nuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Nuclease; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MNSPVLVLNHNYEPLNICSARRALMLVLGGKAEVLEHNHAVLHTTNDTIACPSVIRLGHMIRRPLPNVKLSRREIFRRDH
YTCQYCNRSSADLTLDHVLPRHRGGAHSWENLVSACRTCNHRKGGRTPEEARMRLIRPPFRPFASPYYLIERRMHGLGLE
EWRKFLPASFQTVEDDQ

Sequences:

>Translated_177_residues
MNSPVLVLNHNYEPLNICSARRALMLVLGGKAEVLEHNHAVLHTTNDTIACPSVIRLGHMIRRPLPNVKLSRREIFRRDH
YTCQYCNRSSADLTLDHVLPRHRGGAHSWENLVSACRTCNHRKGGRTPEEARMRLIRPPFRPFASPYYLIERRMHGLGLE
EWRKFLPASFQTVEDDQ
>Mature_177_residues
MNSPVLVLNHNYEPLNICSARRALMLVLGGKAEVLEHNHAVLHTTNDTIACPSVIRLGHMIRRPLPNVKLSRREIFRRDH
YTCQYCNRSSADLTLDHVLPRHRGGAHSWENLVSACRTCNHRKGGRTPEEARMRLIRPPFRPFASPYYLIERRMHGLGLE
EWRKFLPASFQTVEDDQ

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20498; Mature: 20498

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSPVLVLNHNYEPLNICSARRALMLVLGGKAEVLEHNHAVLHTTNDTIACPSVIRLGHM
CCCCEEEEECCCCCHHHHHHHHHEEEEECCCHHHHCCCCEEEEECCCCCCCHHHHHHHHH
IRRPLPNVKLSRREIFRRDHYTCQYCNRSSADLTLDHVLPRHRGGAHSWENLVSACRTCN
HHCCCCCCCHHHHHHHHHCCCEEECCCCCCCCEEHHHHCCCCCCCCCCHHHHHHHHHHHC
HRKGGRTPEEARMRLIRPPFRPFASPYYLIERRMHGLGLEEWRKFLPASFQTVEDDQ
CCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNSPVLVLNHNYEPLNICSARRALMLVLGGKAEVLEHNHAVLHTTNDTIACPSVIRLGHM
CCCCEEEEECCCCCHHHHHHHHHEEEEECCCHHHHCCCCEEEEECCCCCCCHHHHHHHHH
IRRPLPNVKLSRREIFRRDHYTCQYCNRSSADLTLDHVLPRHRGGAHSWENLVSACRTCN
HHCCCCCCCHHHHHHHHHCCCEEECCCCCCCCEEHHHHCCCCCCCCCCHHHHHHHHHHHC
HRKGGRTPEEARMRLIRPPFRPFASPYYLIERRMHGLGLEEWRKFLPASFQTVEDDQ
CCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA