Click here to switch to the map view.

The map label for this gene is 159900726

Identifier: 159900726

GI number: 159900726

Start: 5368374

End: 5369741

Strand: Reverse

Name: 159900726

Synonym: Haur_4213

Alternate gene names: NA

Gene position: 5369741-5368374 (Counterclockwise)

Preceding gene: 159900727

Following gene: 159900725

Centisome position: 84.61

GC content: 53.14

Gene sequence:

>1368_bases
ATGACGAGCTTAGATCTCAGGCTCACCCTTTCACGTAGCAGCGTGCCCGCAAACACTGGCGAACAAGTTTTGTATGTTTT
AGCTGAGGTTGTTGGTCAAGGCAAAACCAACCAGCGTGCGCCGGTGCATTGTGTGTTGTTGGTCGATTGTTCGCCCTCAA
TGCGTGTGCCAATCGCTGATGCGGCCTTGTTTCGCGAATTAATGCGCCGTGGTGCTGCCCATGAGGTTATGCTCGATGGC
GTGCCAGTCTGGAAAATTCGCGATGATTTGATGGATGAGGTGCGGCGACGCGCTCAAAGCCCAAGTCGTTGGCTGGGGCA
GGCCGTGCGTGGCGCAGCTGAGCGCCTAAATGCCGATGATCAACTTTCGATCATCGGCTTTGCTGAAAAAGCTCATGCAG
TGCTCAAAGCCAAATCGCCAACCGATGTGGTGCGCTTGGAAGGCTCAGTCGCCATTCTTGAACGCGGCGATCTTGGCCGG
AGCACCCGGCTGGCTCCAGGCTTGCGCAGCACGATCGATCTGCTTGATAGCATGCCCAGCACTGGTTTTTCACAACGGAT
CGTTGTGCTAACTGATGGCTTTGTTGAAGATGAACAACAAGCCTTTGCCTATGCTCGCCATCTGGCTGCCCGCTCAATTC
CGGTCTCGACGATTGGCCTGGGGGTTGAGTTTCAAGAGCAATTGCTGATGAGCTTTGCTGATCAGAGCGGTGGTCAATCC
AGTTTTATCACCGACCCCAGCGACCTGCCTAATTTGCTTGATGTGGAGTTTGGCAAGGCCCATGCGATTATCGCTCAAAA
GGCGCGGCTTGATTTGCGGCTCGCTCACGATGTCCATATCAAACGAATTTTACGCATTAGGCCAGCCTTGGGCGAAGTAC
CAATCCCTGAATTTGAGGCTGGTTCGGGCAGTTTAAGTTTAGGCTCAATCGAACAACGGGCTAAAGCTGCTTGGTTACTC
GAACTGCGCATCCCTGATCATGTGCCAAATATTTATCGTTTGTTGCGGCTTTCGTTGCAGGCCGACGATCCCCAAGGCCA
AAGTTTGGAGCCAATTAACCGCGATGTGGTGGTCGAATATCATCCGAATGCCGACCAGGCGCTCAACCCAGAGCTTGTAG
CGATTTTGGAACGGGTGACGGCATGGCGCTTGCAAAACAAAGCGCTGGAGCAAGCTGCTCAGGGTGATCAAGCTGGAGCA
ACTCGCCAATTGCAGGCCGCAGTCACCCGCTTGGTCGATTTGGGCGAGCATGAATTAGCCAAACAAACTGCTGCGGCCAG
CCAAACCTTGCAAGAAACTGGCCAAATTAACCCTGAGCAAACCAAAACCTTGCGCTATGCAACCAGAAGATTGACAGAAG
AACGATAA

Upstream 100 bases:

>100_bases
CTCAACCCACAAACATCGCAAGGCAGCATCGAATGGCTCACCAGTGGCGATCCGGCCCATTTTGCTAAGATTCGGCAATG
TTTAGAAATCGAGTAAGCCT

Downstream 100 bases:

>100_bases
TCAGAAACATTCAAGTCATGTTATTCGTCCAAGAACAAGGAATTTTTTGTTGTTCTAGACCTATTCAGAGGAGTTGACCT
GTGTCTGAGCCGACTCAACC

Product: von Willebrand factor type A

Products: NA

Alternate protein names: Von Willebrand Factor Type A Domain-Containing Protein

Number of amino acids: Translated: 455; Mature: 454

Protein sequence:

>455_residues
MTSLDLRLTLSRSSVPANTGEQVLYVLAEVVGQGKTNQRAPVHCVLLVDCSPSMRVPIADAALFRELMRRGAAHEVMLDG
VPVWKIRDDLMDEVRRRAQSPSRWLGQAVRGAAERLNADDQLSIIGFAEKAHAVLKAKSPTDVVRLEGSVAILERGDLGR
STRLAPGLRSTIDLLDSMPSTGFSQRIVVLTDGFVEDEQQAFAYARHLAARSIPVSTIGLGVEFQEQLLMSFADQSGGQS
SFITDPSDLPNLLDVEFGKAHAIIAQKARLDLRLAHDVHIKRILRIRPALGEVPIPEFEAGSGSLSLGSIEQRAKAAWLL
ELRIPDHVPNIYRLLRLSLQADDPQGQSLEPINRDVVVEYHPNADQALNPELVAILERVTAWRLQNKALEQAAQGDQAGA
TRQLQAAVTRLVDLGEHELAKQTAAASQTLQETGQINPEQTKTLRYATRRLTEER

Sequences:

>Translated_455_residues
MTSLDLRLTLSRSSVPANTGEQVLYVLAEVVGQGKTNQRAPVHCVLLVDCSPSMRVPIADAALFRELMRRGAAHEVMLDG
VPVWKIRDDLMDEVRRRAQSPSRWLGQAVRGAAERLNADDQLSIIGFAEKAHAVLKAKSPTDVVRLEGSVAILERGDLGR
STRLAPGLRSTIDLLDSMPSTGFSQRIVVLTDGFVEDEQQAFAYARHLAARSIPVSTIGLGVEFQEQLLMSFADQSGGQS
SFITDPSDLPNLLDVEFGKAHAIIAQKARLDLRLAHDVHIKRILRIRPALGEVPIPEFEAGSGSLSLGSIEQRAKAAWLL
ELRIPDHVPNIYRLLRLSLQADDPQGQSLEPINRDVVVEYHPNADQALNPELVAILERVTAWRLQNKALEQAAQGDQAGA
TRQLQAAVTRLVDLGEHELAKQTAAASQTLQETGQINPEQTKTLRYATRRLTEER
>Mature_454_residues
TSLDLRLTLSRSSVPANTGEQVLYVLAEVVGQGKTNQRAPVHCVLLVDCSPSMRVPIADAALFRELMRRGAAHEVMLDGV
PVWKIRDDLMDEVRRRAQSPSRWLGQAVRGAAERLNADDQLSIIGFAEKAHAVLKAKSPTDVVRLEGSVAILERGDLGRS
TRLAPGLRSTIDLLDSMPSTGFSQRIVVLTDGFVEDEQQAFAYARHLAARSIPVSTIGLGVEFQEQLLMSFADQSGGQSS
FITDPSDLPNLLDVEFGKAHAIIAQKARLDLRLAHDVHIKRILRIRPALGEVPIPEFEAGSGSLSLGSIEQRAKAAWLLE
LRIPDHVPNIYRLLRLSLQADDPQGQSLEPINRDVVVEYHPNADQALNPELVAILERVTAWRLQNKALEQAAQGDQAGAT
RQLQAAVTRLVDLGEHELAKQTAAASQTLQETGQINPEQTKTLRYATRRLTEER

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50003; Mature: 49871

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLDLRLTLSRSSVPANTGEQVLYVLAEVVGQGKTNQRAPVHCVLLVDCSPSMRVPIAD
CCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCHHH
AALFRELMRRGAAHEVMLDGVPVWKIRDDLMDEVRRRAQSPSRWLGQAVRGAAERLNADD
HHHHHHHHHCCCCCEEEECCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
QLSIIGFAEKAHAVLKAKSPTDVVRLEGSVAILERGDLGRSTRLAPGLRSTIDLLDSMPS
CEEEEEEHHHHHHHHCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCC
TGFSQRIVVLTDGFVEDEQQAFAYARHLAARSIPVSTIGLGVEFQEQLLMSFADQSGGQS
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHEECCHHHHHHHHHHHHHCCCCCC
SFITDPSDLPNLLDVEFGKAHAIIAQKARLDLRLAHDVHIKRILRIRPALGEVPIPEFEA
CCCCCHHHCCCCCCCCCCCHHHHHHHHHHCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCC
GSGSLSLGSIEQRAKAAWLLELRIPDHVPNIYRLLRLSLQADDPQGQSLEPINRDVVVEY
CCCCEECCHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEE
HPNADQALNPELVAILERVTAWRLQNKALEQAAQGDQAGATRQLQAAVTRLVDLGEHELA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHH
KQTAAASQTLQETGQINPEQTKTLRYATRRLTEER
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TSLDLRLTLSRSSVPANTGEQVLYVLAEVVGQGKTNQRAPVHCVLLVDCSPSMRVPIAD
CCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCCHHH
AALFRELMRRGAAHEVMLDGVPVWKIRDDLMDEVRRRAQSPSRWLGQAVRGAAERLNADD
HHHHHHHHHCCCCCEEEECCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
QLSIIGFAEKAHAVLKAKSPTDVVRLEGSVAILERGDLGRSTRLAPGLRSTIDLLDSMPS
CEEEEEEHHHHHHHHCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCC
TGFSQRIVVLTDGFVEDEQQAFAYARHLAARSIPVSTIGLGVEFQEQLLMSFADQSGGQS
CCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHEECCHHHHHHHHHHHHHCCCCCC
SFITDPSDLPNLLDVEFGKAHAIIAQKARLDLRLAHDVHIKRILRIRPALGEVPIPEFEA
CCCCCHHHCCCCCCCCCCCHHHHHHHHHHCEEEEHHHHHHHHHHHHCCCCCCCCCCCCCC
GSGSLSLGSIEQRAKAAWLLELRIPDHVPNIYRLLRLSLQADDPQGQSLEPINRDVVVEY
CCCCEECCHHHHHHHEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEE
HPNADQALNPELVAILERVTAWRLQNKALEQAAQGDQAGATRQLQAAVTRLVDLGEHELA
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHH
KQTAAASQTLQETGQINPEQTKTLRYATRRLTEER
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA