| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900660
Identifier: 159900660
GI number: 159900660
Start: 5295499
End: 5295762
Strand: Reverse
Name: 159900660
Synonym: Haur_4147
Alternate gene names: NA
Gene position: 5295762-5295499 (Counterclockwise)
Preceding gene: 159900661
Following gene: 159900658
Centisome position: 83.44
GC content: 49.62
Gene sequence:
>264_bases GTGATGATGTATCACGTGCCACCAAGCTCGCCGTATGTGCCATGCCCTCGCTGCCAGAATCCACTACCCACCAAAGTAAC CATGAGTTGGTGGGGTGGGATTGTTGGCCCAAAAATGGTCAACTTAGTCAAATGCCCGCAGTGCAAGCTACAATACAACG GCAAAACCGGAGCTAGCGTCAGCAAATTTATTGTGATCTATGTTGGGGCTTGGGTGCTATTGTTTTTGATTGTGGTCGCG GTGTTGTTTTTTGCCCAAGGCTAG
Upstream 100 bases:
>100_bases GTATGCTCTTTACCGATTTAAGCAATCCAACTTCGAATAAAATCTATCAAGCGGTTGGCTTTCGGCCAGTATGCGATGTT GATCAATATCGTTTTGAGGA
Downstream 100 bases:
>100_bases ATTGGGGATGATCCCTCACCCCCTCGCCCGCCCAGCAGACGAGGGGAACCATTCTGAAATTGCACCTCTCGTTCGCCGCA GTGGGCGAGGGGGCGAGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MMMYHVPPSSPYVPCPRCQNPLPTKVTMSWWGGIVGPKMVNLVKCPQCKLQYNGKTGASVSKFIVIYVGAWVLLFLIVVA VLFFAQG
Sequences:
>Translated_87_residues MMMYHVPPSSPYVPCPRCQNPLPTKVTMSWWGGIVGPKMVNLVKCPQCKLQYNGKTGASVSKFIVIYVGAWVLLFLIVVA VLFFAQG >Mature_87_residues MMMYHVPPSSPYVPCPRCQNPLPTKVTMSWWGGIVGPKMVNLVKCPQCKLQYNGKTGASVSKFIVIYVGAWVLLFLIVVA VLFFAQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9634; Mature: 9634
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 10.3 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 10.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMYHVPPSSPYVPCPRCQNPLPTKVTMSWWGGIVGPKMVNLVKCPQCKLQYNGKTGASV CEEEECCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCHHHHHHHCCCCCEEEECCCCCCHH SKFIVIYVGAWVLLFLIVVAVLFFAQG HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMMYHVPPSSPYVPCPRCQNPLPTKVTMSWWGGIVGPKMVNLVKCPQCKLQYNGKTGASV CEEEECCCCCCCCCCCCCCCCCCCEEEHHHCCCCCCHHHHHHHCCCCCEEEECCCCCCHH SKFIVIYVGAWVLLFLIVVAVLFFAQG HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA