| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900562
Identifier: 159900562
GI number: 159900562
Start: 5167108
End: 5167866
Strand: Reverse
Name: 159900562
Synonym: Haur_4049
Alternate gene names: NA
Gene position: 5167866-5167108 (Counterclockwise)
Preceding gene: 159900563
Following gene: 159900561
Centisome position: 81.43
GC content: 44.14
Gene sequence:
>759_bases ATGAATTTTGATCAACTTGATCAGTTAATGCGGGTGTATGAGACAAGCAACGATTTAGCGGTATTACCCAATATTTGGAT GGTAGTGCGGATTGATGGACGTTCATTTACCCGACTCACCAAAGATGTTATGAACTATCAACGTCCATTTGATCAACGCT TTCGTGATGCAATGATCAGCACGGTCAAACATCTGATGGAATGTGGCTTTCCAGTGCTTTATGGCTATACCCAAAGTGAT GAGATTTCACTGCTACTGAGTTATGGTTGTGATGTATTTGGCCGCAAGTTACGCAAATATTGCTCGATTTTGGCGGGCGA ATCCAGTGGTCATTTTAGTTTAGCGATTCAGCAACAGGCGAGCTTTGATTGCCGAATTTGCCAATTGCCGACCGATCAAC TGGTACACGATTATTTTCGCTGGCGCATGGAAGATGCGCATCGGAATGCCCTGAATGCCTATTGCTATTGGAGCCTGCGT GATCAAGCGCTTGATCCACAAACTGCCCATATGCAAATAGCTAATCTTTCGGTTGCCCAAAAAAATGAGCTGCTCTTTCA ACATGGCATCAATTTTAACGATCTGGTTGCCTGGCAAAAACGCGGCATTGGGTTCTATTGGCAAACCGTCGATCTCCAAG GCTATAATCCACAAACTCAAATGCCAACGCTCACCAAACGACGTAAAATTCATGTTGAGTTTGAATTACCGCAACGCGAA GCCTATAGCAATTTGCTCGCAAGCCACTTTGATCGTTAA
Upstream 100 bases:
>100_bases AAAAACTTGAATTACCAAGTTTAGCCGAAGGCTTTGAGCGCTTGTGGTATGTTCGCCAATTACCAGCCCACCAATTTCAA GTAACACCCTGGGAGGAGCA
Downstream 100 bases:
>100_bases TCTTGGAGGTATCGATGCCAATTAATCTGGCTTTGGTGGGTTTTGGGATGGCCAGTCAAGTGTTTCATGCTCCACTGATT ATGGCCGAACCACAATTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: TRNA(His)-5-Guanylyltransferase; TRNA(His) Guanylyltransferase; TRNAHis Guanylyltransferase Superfamily; TRNA(His) Guanylyltransferase ThgL
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MNFDQLDQLMRVYETSNDLAVLPNIWMVVRIDGRSFTRLTKDVMNYQRPFDQRFRDAMISTVKHLMECGFPVLYGYTQSD EISLLLSYGCDVFGRKLRKYCSILAGESSGHFSLAIQQQASFDCRICQLPTDQLVHDYFRWRMEDAHRNALNAYCYWSLR DQALDPQTAHMQIANLSVAQKNELLFQHGINFNDLVAWQKRGIGFYWQTVDLQGYNPQTQMPTLTKRRKIHVEFELPQRE AYSNLLASHFDR
Sequences:
>Translated_252_residues MNFDQLDQLMRVYETSNDLAVLPNIWMVVRIDGRSFTRLTKDVMNYQRPFDQRFRDAMISTVKHLMECGFPVLYGYTQSD EISLLLSYGCDVFGRKLRKYCSILAGESSGHFSLAIQQQASFDCRICQLPTDQLVHDYFRWRMEDAHRNALNAYCYWSLR DQALDPQTAHMQIANLSVAQKNELLFQHGINFNDLVAWQKRGIGFYWQTVDLQGYNPQTQMPTLTKRRKIHVEFELPQRE AYSNLLASHFDR >Mature_252_residues MNFDQLDQLMRVYETSNDLAVLPNIWMVVRIDGRSFTRLTKDVMNYQRPFDQRFRDAMISTVKHLMECGFPVLYGYTQSD EISLLLSYGCDVFGRKLRKYCSILAGESSGHFSLAIQQQASFDCRICQLPTDQLVHDYFRWRMEDAHRNALNAYCYWSLR DQALDPQTAHMQIANLSVAQKNELLFQHGINFNDLVAWQKRGIGFYWQTVDLQGYNPQTQMPTLTKRRKIHVEFELPQRE AYSNLLASHFDR
Specific function: Unknown
COG id: COG4021
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI89242148, Length=226, Percent_Identity=28.7610619469027, Blast_Score=102, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6321461, Length=207, Percent_Identity=27.0531400966184, Blast_Score=81, Evalue=2e-16, Organism=Drosophila melanogaster, GI19921364, Length=215, Percent_Identity=31.6279069767442, Blast_Score=106, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29629; Mature: 29629
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFDQLDQLMRVYETSNDLAVLPNIWMVVRIDGRSFTRLTKDVMNYQRPFDQRFRDAMIS CCHHHHHHHHHHHHCCCCEEECCCEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHH TVKHLMECGFPVLYGYTQSDEISLLLSYGCDVFGRKLRKYCSILAGESSGHFSLAIQQQA HHHHHHHCCCEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCC SFDCRICQLPTDQLVHDYFRWRMEDAHRNALNAYCYWSLRDQALDPQTAHMQIANLSVAQ CCCEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHEEEECCCHHH KNELLFQHGINFNDLVAWQKRGIGFYWQTVDLQGYNPQTQMPTLTKRRKIHVEFELPQRE HHHHHHHCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCHHH AYSNLLASHFDR HHHHHHHHHCCC >Mature Secondary Structure MNFDQLDQLMRVYETSNDLAVLPNIWMVVRIDGRSFTRLTKDVMNYQRPFDQRFRDAMIS CCHHHHHHHHHHHHCCCCEEECCCEEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHH TVKHLMECGFPVLYGYTQSDEISLLLSYGCDVFGRKLRKYCSILAGESSGHFSLAIQQQA HHHHHHHCCCEEEECCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCC SFDCRICQLPTDQLVHDYFRWRMEDAHRNALNAYCYWSLRDQALDPQTAHMQIANLSVAQ CCCEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHEEEECCCHHH KNELLFQHGINFNDLVAWQKRGIGFYWQTVDLQGYNPQTQMPTLTKRRKIHVEFELPQRE HHHHHHHCCCCHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCHHH AYSNLLASHFDR HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA