| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yqgH [H]
Identifier: 159900511
GI number: 159900511
Start: 5104678
End: 5105643
Strand: Direct
Name: yqgH [H]
Synonym: Haur_3998
Alternate gene names: 159900511
Gene position: 5104678-5105643 (Clockwise)
Preceding gene: 159900510
Following gene: 159900512
Centisome position: 80.43
GC content: 51.14
Gene sequence:
>966_bases ATGGACGATAAGGTGAGTATTGGTATGGATAGCCGTCGTATTACGACCACGCAACGTGAGACAACTCGCCCGTTTAGCCT AAAAAGACAGCCGCGCCTTGGTGAAAGCATCATCCAAGGATTTTTGCTCTTTTGCGGTGTGCTTTCGATGTTCACAACGA TCGGGATCGTGGTTGTGCTTGGCTCAGAATCAATTGCATTCTTTCGCCAAGTCAGCATTGTCGAATTTGTGACCAACACG GTTTGGTCGCCCCAAATTGATGAGTTTGGGATTTTGCCTTTGCTGCTCTCAACGTTGCTCACTTCAACCATCGCAATGTT TATTGCATTGCCAACCGGCCTCGCAGCGGCAATTTATCTGAGCGAATATGCCTCAAGCCGCGCTCGCAGCATTCTCAAGC CAATCTTGGAAGTTTTGGCGGGCGTGCCAACCGTGGTGTATGGCTACTTTGCGCTCAAATTTATGACACCAGTTCTCAAG GCAGTCTTTGGTGAGGCCAATGTCAATATCTACAACATGGCTTCGGCAGGCTTGGTGATGGGGATTATGATCATTCCCAT GGTGTCGTCGATGAGTGAAGATGCGCTCAGTGCTGTGCCACGCGCCCTGCGTGAAGGGGCTTATGGCTTGGGTGCAACCC GCCTCGAAACGGCAATCAAAGTAGTTTTGCCAGCGGGGATTTCGGGGATTATTGCGGCCTTTGTGGTGGCAATTTCGCGG GCAGTTGGTGAAACAATGATTGTGGCGGTGGCGGCTGGTGCTAAACCAACCTTTACCTTCAATCCATTCGAAGCCGCCGA AACCATGACTGGCCACATCGCACGGATTAGCGGTGGCGACTTAAGTTATGCCAGCATCGACTACAACAGTATCTTTGCCA TCGGCTTGACCCTGTTCTTGATGACCCTCGGTCTCAATATGGTCAGCCGTCGCTTGGTACGCCGCTTCCGTGAGGTATAC GAATAA
Upstream 100 bases:
>100_bases GTAAGCACCAAGGGTTTATGGTACCATGGCACAGGCTGCGGAGTTTAGCTCCGCAGCCTGTTGACCTACACAAACCCCGA TTCAAAACCGGGAGGTTTCA
Downstream 100 bases:
>100_bases TGACAACACTGAATGATGAGATTAAATCAGGGTTGCCTCAAGGTGAAGCGGCTCGCCGCAATGTTGCTAGCCGCCGCCGC ACTGGCGCAATCTGGCGCAC
Product: phosphate ABC transporter inner membrane subunit PstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MDDKVSIGMDSRRITTTQRETTRPFSLKRQPRLGESIIQGFLLFCGVLSMFTTIGIVVVLGSESIAFFRQVSIVEFVTNT VWSPQIDEFGILPLLLSTLLTSTIAMFIALPTGLAAAIYLSEYASSRARSILKPILEVLAGVPTVVYGYFALKFMTPVLK AVFGEANVNIYNMASAGLVMGIMIIPMVSSMSEDALSAVPRALREGAYGLGATRLETAIKVVLPAGISGIIAAFVVAISR AVGETMIVAVAAGAKPTFTFNPFEAAETMTGHIARISGGDLSYASIDYNSIFAIGLTLFLMTLGLNMVSRRLVRRFREVY E
Sequences:
>Translated_321_residues MDDKVSIGMDSRRITTTQRETTRPFSLKRQPRLGESIIQGFLLFCGVLSMFTTIGIVVVLGSESIAFFRQVSIVEFVTNT VWSPQIDEFGILPLLLSTLLTSTIAMFIALPTGLAAAIYLSEYASSRARSILKPILEVLAGVPTVVYGYFALKFMTPVLK AVFGEANVNIYNMASAGLVMGIMIIPMVSSMSEDALSAVPRALREGAYGLGATRLETAIKVVLPAGISGIIAAFVVAISR AVGETMIVAVAAGAKPTFTFNPFEAAETMTGHIARISGGDLSYASIDYNSIFAIGLTLFLMTLGLNMVSRRLVRRFREVY E >Mature_321_residues MDDKVSIGMDSRRITTTQRETTRPFSLKRQPRLGESIIQGFLLFCGVLSMFTTIGIVVVLGSESIAFFRQVSIVEFVTNT VWSPQIDEFGILPLLLSTLLTSTIAMFIALPTGLAAAIYLSEYASSRARSILKPILEVLAGVPTVVYGYFALKFMTPVLK AVFGEANVNIYNMASAGLVMGIMIIPMVSSMSEDALSAVPRALREGAYGLGATRLETAIKVVLPAGISGIIAAFVVAISR AVGETMIVAVAAGAKPTFTFNPFEAAETMTGHIARISGGDLSYASIDYNSIFAIGLTLFLMTLGLNMVSRRLVRRFREVY E
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=263, Percent_Identity=28.1368821292776, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1790163, Length=136, Percent_Identity=30.8823529411765, Blast_Score=69, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 34609; Mature: 34609
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDKVSIGMDSRRITTTQRETTRPFSLKRQPRLGESIIQGFLLFCGVLSMFTTIGIVVVL CCCCEECCCCCCCEECCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEE GSESIAFFRQVSIVEFVTNTVWSPQIDEFGILPLLLSTLLTSTIAMFIALPTGLAAAIYL CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SEYASSRARSILKPILEVLAGVPTVVYGYFALKFMTPVLKAVFGEANVNIYNMASAGLVM HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHH GIMIIPMVSSMSEDALSAVPRALREGAYGLGATRLETAIKVVLPAGISGIIAAFVVAISR HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AVGETMIVAVAAGAKPTFTFNPFEAAETMTGHIARISGGDLSYASIDYNSIFAIGLTLFL HHCHHEEEEEECCCCCCEEECCHHHHHHHHHHHEEECCCCCEEEECCHHHHHHHHHHHHH MTLGLNMVSRRLVRRFREVYE HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MDDKVSIGMDSRRITTTQRETTRPFSLKRQPRLGESIIQGFLLFCGVLSMFTTIGIVVVL CCCCEECCCCCCCEECCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEE GSESIAFFRQVSIVEFVTNTVWSPQIDEFGILPLLLSTLLTSTIAMFIALPTGLAAAIYL CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SEYASSRARSILKPILEVLAGVPTVVYGYFALKFMTPVLKAVFGEANVNIYNMASAGLVM HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHH GIMIIPMVSSMSEDALSAVPRALREGAYGLGATRLETAIKVVLPAGISGIIAAFVVAISR HHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH AVGETMIVAVAAGAKPTFTFNPFEAAETMTGHIARISGGDLSYASIDYNSIFAIGLTLFL HHCHHEEEEEECCCCCCEEECCHHHHHHHHHHHEEECCCCCEEEECCHHHHHHHHHHHHH MTLGLNMVSRRLVRRFREVYE HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]