| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is sphX [H]
Identifier: 159900510
GI number: 159900510
Start: 5102626
End: 5104581
Strand: Direct
Name: sphX [H]
Synonym: Haur_3997
Alternate gene names: 159900510
Gene position: 5102626-5104581 (Clockwise)
Preceding gene: 159900509
Following gene: 159900511
Centisome position: 80.4
GC content: 52.71
Gene sequence:
>1956_bases ATGCGGAAACTGCTGAGTTTAATGCTTGCCTCAATTATGTTGCTGACAATGCTCGCAGCATGTGGCGGCGACAGCACTCC AACCACTGCACCAACTACGGCACCAGCTACCGCCACTACTGGCCAAGCTGCTGCAACAACTGAACCAACCGCTCCTGCTG CTGAAACTCCTACAGTTGAAGCAACCGCTGAAGTTCCTGCTGGTGGAGAAGTTGACCCAGCAATGGTAAAAGGCGATATC GTGAGCGCTGGTTCATCAACGGTCTATCCGTTGAGCGAAGCCGTGGCCGAAATCTTTACCGAAGATGGCTACACTGGCAA TATCACGATCGATAGCATCGGCACGGGCGCTGGGTTCGAGCGCTTCTGTACCGCTGCCGAAACCGACATCGCCAACGCCA GCCGCGCAATCAAAGACGAAGAAGCCAAAGCCTGTGCCGATAAAGGCCGCGAAGTCGTCGAGTTCCGCGTCGGTACCGAT GCCTTGGCCGTCGTGGTCAGCAGCAAAAATACCTTCGTCAGCAACTTGACCGAAGCCCAAGTCGCCGACATCTTCTCAGG CACCTACAAAACCTGGGATCAAGTTGATGCCAGCTACCCAGCCGAAGCGATCAAACTCTACAGCCCAGGCACCGATAGCG GTACCTTCGACTACTTCGTCGAACATTTCTACGCGAAAGAAGGTAAGTTCATCTTGGGTGCAAACCCACAGTTGAGCGAA GACGATAACGTGTTGGTGACCGGGATCGAAGGCGATGCCAATGCGATCGGCTACTTTGGCTATGCCTACTACAACGAAAA CAAAGCTAAGCTCAAAGCCTTGACGATTGACGGTGTGGAACCAACCGAAGCCACCACCGAAGATGGCAGCTATCCGTTGG CTCGTCCGTTGTACATCTACTCAGCCAAGAATATTTTGACTGAAAAGCCTCAAGTCGCGGCTTTCATCAACTACTACTTG ACCAACGTCAACGATGTTATTCTTGAAGTAGGCTACTTCCCAGCCAGCGACGAAGCGTTGGGCGAAGCTAAAGACGCTTT GGTTAATGCCTTGACGGGTGGCAGCAGCAGCAATACCAACACTGGTAGCGCCGTTGCCCTCGAAGAAGTTGATCCAGCAG CAGTTCAAGGTGATATCGTGAGCGCTGGTTCATCAACGGTCTATCCGTTGAGCGAAGCCGTGGCCGAAATCTTCGGCGAA GATGGCTACAGTGGCAATATCACGATCGATAGCATTGGCACGGGCGCTGGGTTCGAGCGCTTCTGTACCGCTGCCGAAAC CGACATCGCCAACGCCAGCCGCGCAATCAAAGACGAAGAAGCCAAAGCCTGTGCCGATAAAGGCCGCGAAGTCGTCGAGT TCCGCGTCGGTACCGATGCTTTGGCCGTCGTGGTCAGCAGCAAAAATACCTTCGTCACCAATTTGACCGAAGCTCAAGTC GCTGACATCTTCTCAGGCACCTACAAAACCTGGGACCAAGTTGATGCCAGCTACCCAGCCGAAGCGATCAAACTCTACAG CCCAGGCACCGATAGCGGTACTTTCGACTACTTCGTTGAACATTTCTACGCGAAAGAAGAAAAATTCATGTTGGGTGCAA ACCCACAGTTGAGCGAAGACGATAACGTGTTGGTGACCGGGATCGAAGGCGATGCCAATGCGATCGGCTACTTTGGCTAT GCCTACTACAACGAAAACAAGAGCAAACTCAAAGCGTTGACGATTGATGGTGTGGAACCAACCGAAGCCACCACCGAAGA TGGCAGCTATCCGTTGGCTCGTCCGTTGTACATCTACTCGGCTAAGAACATCTTGGCTGAAAAAGCCCAAGTCGCGGCCT TTATCAACTACTACTTGACCAACGTCAATGAAGTTATCCTCGAAGTGGGCTACTTCCCAGCGAGTGAAGAAGCATTGAAC GAAGCCAAGCAAAACCTGCTCGACGCAACCAAGTAA
Upstream 100 bases:
>100_bases ATCAAAGCAGTTTAAGTATAGCGATTTAGACTGCTCTTACGTGATGCACGTAATTCAATTTGCAACTTACAGAAATTTCT TTTTCGGAGGAATCCAGATC
Downstream 100 bases:
>100_bases GCACCAAGGGTTTATGGTACCATGGCACAGGCTGCGGAGTTTAGCTCCGCAGCCTGTTGACCTACACAAACCCCGATTCA AAACCGGGAGGTTTCAATGG
Product: phosphate binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 651; Mature: 651
Protein sequence:
>651_residues MRKLLSLMLASIMLLTMLAACGGDSTPTTAPTTAPATATTGQAAATTEPTAPAAETPTVEATAEVPAGGEVDPAMVKGDI VSAGSSTVYPLSEAVAEIFTEDGYTGNITIDSIGTGAGFERFCTAAETDIANASRAIKDEEAKACADKGREVVEFRVGTD ALAVVVSSKNTFVSNLTEAQVADIFSGTYKTWDQVDASYPAEAIKLYSPGTDSGTFDYFVEHFYAKEGKFILGANPQLSE DDNVLVTGIEGDANAIGYFGYAYYNENKAKLKALTIDGVEPTEATTEDGSYPLARPLYIYSAKNILTEKPQVAAFINYYL TNVNDVILEVGYFPASDEALGEAKDALVNALTGGSSSNTNTGSAVALEEVDPAAVQGDIVSAGSSTVYPLSEAVAEIFGE DGYSGNITIDSIGTGAGFERFCTAAETDIANASRAIKDEEAKACADKGREVVEFRVGTDALAVVVSSKNTFVTNLTEAQV ADIFSGTYKTWDQVDASYPAEAIKLYSPGTDSGTFDYFVEHFYAKEEKFMLGANPQLSEDDNVLVTGIEGDANAIGYFGY AYYNENKSKLKALTIDGVEPTEATTEDGSYPLARPLYIYSAKNILAEKAQVAAFINYYLTNVNEVILEVGYFPASEEALN EAKQNLLDATK
Sequences:
>Translated_651_residues MRKLLSLMLASIMLLTMLAACGGDSTPTTAPTTAPATATTGQAAATTEPTAPAAETPTVEATAEVPAGGEVDPAMVKGDI VSAGSSTVYPLSEAVAEIFTEDGYTGNITIDSIGTGAGFERFCTAAETDIANASRAIKDEEAKACADKGREVVEFRVGTD ALAVVVSSKNTFVSNLTEAQVADIFSGTYKTWDQVDASYPAEAIKLYSPGTDSGTFDYFVEHFYAKEGKFILGANPQLSE DDNVLVTGIEGDANAIGYFGYAYYNENKAKLKALTIDGVEPTEATTEDGSYPLARPLYIYSAKNILTEKPQVAAFINYYL TNVNDVILEVGYFPASDEALGEAKDALVNALTGGSSSNTNTGSAVALEEVDPAAVQGDIVSAGSSTVYPLSEAVAEIFGE DGYSGNITIDSIGTGAGFERFCTAAETDIANASRAIKDEEAKACADKGREVVEFRVGTDALAVVVSSKNTFVTNLTEAQV ADIFSGTYKTWDQVDASYPAEAIKLYSPGTDSGTFDYFVEHFYAKEEKFMLGANPQLSEDDNVLVTGIEGDANAIGYFGY AYYNENKSKLKALTIDGVEPTEATTEDGSYPLARPLYIYSAKNILAEKAQVAAFINYYLTNVNEVILEVGYFPASEEALN EAKQNLLDATK >Mature_651_residues MRKLLSLMLASIMLLTMLAACGGDSTPTTAPTTAPATATTGQAAATTEPTAPAAETPTVEATAEVPAGGEVDPAMVKGDI VSAGSSTVYPLSEAVAEIFTEDGYTGNITIDSIGTGAGFERFCTAAETDIANASRAIKDEEAKACADKGREVVEFRVGTD ALAVVVSSKNTFVSNLTEAQVADIFSGTYKTWDQVDASYPAEAIKLYSPGTDSGTFDYFVEHFYAKEGKFILGANPQLSE DDNVLVTGIEGDANAIGYFGYAYYNENKAKLKALTIDGVEPTEATTEDGSYPLARPLYIYSAKNILTEKPQVAAFINYYL TNVNDVILEVGYFPASDEALGEAKDALVNALTGGSSSNTNTGSAVALEEVDPAAVQGDIVSAGSSTVYPLSEAVAEIFGE DGYSGNITIDSIGTGAGFERFCTAAETDIANASRAIKDEEAKACADKGREVVEFRVGTDALAVVVSSKNTFVTNLTEAQV ADIFSGTYKTWDQVDASYPAEAIKLYSPGTDSGTFDYFVEHFYAKEEKFMLGANPQLSEDDNVLVTGIEGDANAIGYFGY AYYNENKSKLKALTIDGVEPTEATTEDGSYPLARPLYIYSAKNILAEKAQVAAFINYYLTNVNEVILEVGYFPASEEALN EAKQNLLDATK
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell inner membrane. Note=Found in the cytoplasmic membrane in a form that is closely associated with the cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 68955; Mature: 68955
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLLSLMLASIMLLTMLAACGGDSTPTTAPTTAPATATTGQAAATTEPTAPAAETPTVE CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE ATAEVPAGGEVDPAMVKGDIVSAGSSTVYPLSEAVAEIFTEDGYTGNITIDSIGTGAGFE EEECCCCCCCCCHHHEECCEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCHH RFCTAAETDIANASRAIKDEEAKACADKGREVVEFRVGTDALAVVVSSKNTFVSNLTEAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCHHHHHHHHHH VADIFSGTYKTWDQVDASYPAEAIKLYSPGTDSGTFDYFVEHFYAKEGKFILGANPQLSE HHHHHHCCCCCHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCC DDNVLVTGIEGDANAIGYFGYAYYNENKAKLKALTIDGVEPTEATTEDGSYPLARPLYIY CCCEEEEEECCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEE SAKNILTEKPQVAAFINYYLTNVNDVILEVGYFPASDEALGEAKDALVNALTGGSSSNTN ECCHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCC TGSAVALEEVDPAAVQGDIVSAGSSTVYPLSEAVAEIFGEDGYSGNITIDSIGTGAGFER CCCEEEEECCCCCHHCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHH FCTAAETDIANASRAIKDEEAKACADKGREVVEFRVGTDALAVVVSSKNTFVTNLTEAQV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCEEEECCCHHHH ADIFSGTYKTWDQVDASYPAEAIKLYSPGTDSGTFDYFVEHFYAKEEKFMLGANPQLSED HHHHHCCCCCHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCC DNVLVTGIEGDANAIGYFGYAYYNENKSKLKALTIDGVEPTEATTEDGSYPLARPLYIYS CCEEEEEECCCCCEEEEEEEEEECCCCHHEEEEEECCCCCCCCCCCCCCCCCCCEEEEEE AKNILAEKAQVAAFINYYLTNVNEVILEVGYFPASEEALNEAKQNLLDATK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MRKLLSLMLASIMLLTMLAACGGDSTPTTAPTTAPATATTGQAAATTEPTAPAAETPTVE CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE ATAEVPAGGEVDPAMVKGDIVSAGSSTVYPLSEAVAEIFTEDGYTGNITIDSIGTGAGFE EEECCCCCCCCCHHHEECCEEECCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCHH RFCTAAETDIANASRAIKDEEAKACADKGREVVEFRVGTDALAVVVSSKNTFVSNLTEAQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCHHHHHHHHHH VADIFSGTYKTWDQVDASYPAEAIKLYSPGTDSGTFDYFVEHFYAKEGKFILGANPQLSE HHHHHHCCCCCHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCC DDNVLVTGIEGDANAIGYFGYAYYNENKAKLKALTIDGVEPTEATTEDGSYPLARPLYIY CCCEEEEEECCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEE SAKNILTEKPQVAAFINYYLTNVNDVILEVGYFPASDEALGEAKDALVNALTGGSSSNTN ECCHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCC TGSAVALEEVDPAAVQGDIVSAGSSTVYPLSEAVAEIFGEDGYSGNITIDSIGTGAGFER CCCEEEEECCCCCHHCCCEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCHHH FCTAAETDIANASRAIKDEEAKACADKGREVVEFRVGTDALAVVVSSKNTFVTNLTEAQV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEEEEECCCEEEECCCHHHH ADIFSGTYKTWDQVDASYPAEAIKLYSPGTDSGTFDYFVEHFYAKEEKFMLGANPQLSED HHHHHCCCCCHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEECCCCCCCCC DNVLVTGIEGDANAIGYFGYAYYNENKSKLKALTIDGVEPTEATTEDGSYPLARPLYIYS CCEEEEEECCCCCEEEEEEEEEECCCCHHEEEEEECCCCCCCCCCCCCCCCCCCEEEEEE AKNILAEKAQVAAFINYYLTNVNEVILEVGYFPASEEALNEAKQNLLDATK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7741855 [H]