| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900496
Identifier: 159900496
GI number: 159900496
Start: 5081892
End: 5082584
Strand: Reverse
Name: 159900496
Synonym: Haur_3983
Alternate gene names: NA
Gene position: 5082584-5081892 (Counterclockwise)
Preceding gene: 159900497
Following gene: 159900495
Centisome position: 80.08
GC content: 48.92
Gene sequence:
>693_bases ATGAAATTGCTGCTTTGGGATATTGATGGAACCCTGATTCGGTCACATGGGCGCAGTCTTGAAGCTTTCAAGGCTGCGTT TCAGCGTGTATACGAAGTTGATCTGCCGCTTAGCTCAACCGCTGGCAAAACTGATGGCCTGATCGTTCGTGAGACACTCC ATTCATGGGAAGAGGCAGCAATTCTCGAGCGGCTTGAGCAATTTTACGCCGTGTATGAAGGCGAATTACAAGCTCGTTTT GAATATCTGCAACGCGAAACCACAATTTTACATGGTGTTCATTCGGCCTTGAGCCACTTACAACCCCATACGATTCAATC CTTGCTAACAGGCAATTTGCAACGTACCGCTAAAATCAAACTCGATGCTGTTGATCTAAGCCGCCATTTTCGTTGGGAAT GGGGCGCATTCGGCTCGGATAGCCATATTCGCAACGATTTAGTGCCCGTCGCATTGCAACGAGCGCAAGCTGCTGGTTGG CATGGCACGTTTGATGATGTAGTGGTAATTGGCGATACGCCGTTTGATATTGCTTGCGCCAAAATTGCTGGAGCATGCTC GGTTGCCGTGGCAAGTGGTAAGTTCAGCCGCGAACAACTTTCTGAGCACCAGCCCGATTTGCTGCTCGAAAATTTGGGCG AATTGGCCCAGCTTCAGGCATTTTTAGGAGTAGCCGATGAAATTGCTCGATAA
Upstream 100 bases:
>100_bases ATATTCCACTCAAAGATACTGAGTTAGGGCCACAATTCCGCAGCCTTGGCGAATTGGTACAGCCGCTGGCCGACCTTGTC AATGGGGAACCAACCGAACA
Downstream 100 bases:
>100_bases AGTAATTGTCATTACTGGTGGCAGCCGTGGCTTGGGCTTGGCGATGGCCGAAGCAATGCTCAGCCAAGGAGCCAAAGTTG TGATCGCTGGCCGCGATCAA
Product: hydrolase
Products: NA
Alternate protein names: Hydrolase; Haloacid Dehalogenase Domain-Containing Protein Hydrolase; Phosphoglycolate Phosphatase; Haloacid Dehalogenase-Like Hydrolase; HAD Superfamily Hydrolase; Phosphatase; Hydrolase Haloacid Dehalogenase-Like Family; HAD Family Hydrolase
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MKLLLWDIDGTLIRSHGRSLEAFKAAFQRVYEVDLPLSSTAGKTDGLIVRETLHSWEEAAILERLEQFYAVYEGELQARF EYLQRETTILHGVHSALSHLQPHTIQSLLTGNLQRTAKIKLDAVDLSRHFRWEWGAFGSDSHIRNDLVPVALQRAQAAGW HGTFDDVVVIGDTPFDIACAKIAGACSVAVASGKFSREQLSEHQPDLLLENLGELAQLQAFLGVADEIAR
Sequences:
>Translated_230_residues MKLLLWDIDGTLIRSHGRSLEAFKAAFQRVYEVDLPLSSTAGKTDGLIVRETLHSWEEAAILERLEQFYAVYEGELQARF EYLQRETTILHGVHSALSHLQPHTIQSLLTGNLQRTAKIKLDAVDLSRHFRWEWGAFGSDSHIRNDLVPVALQRAQAAGW HGTFDDVVVIGDTPFDIACAKIAGACSVAVASGKFSREQLSEHQPDLLLENLGELAQLQAFLGVADEIAR >Mature_230_residues MKLLLWDIDGTLIRSHGRSLEAFKAAFQRVYEVDLPLSSTAGKTDGLIVRETLHSWEEAAILERLEQFYAVYEGELQARF EYLQRETTILHGVHSALSHLQPHTIQSLLTGNLQRTAKIKLDAVDLSRHFRWEWGAFGSDSHIRNDLVPVALQRAQAAGW HGTFDDVVVIGDTPFDIACAKIAGACSVAVASGKFSREQLSEHQPDLLLENLGELAQLQAFLGVADEIAR
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25599; Mature: 25599
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLLWDIDGTLIRSHGRSLEAFKAAFQRVYEVDLPLSSTAGKTDGLIVRETLHSWEEAA CEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHH ILERLEQFYAVYEGELQARFEYLQRETTILHGVHSALSHLQPHTIQSLLTGNLQRTAKIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEE LDAVDLSRHFRWEWGAFGSDSHIRNDLVPVALQRAQAAGWHGTFDDVVVIGDTPFDIACA EEEEEHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHH KIAGACSVAVASGKFSREQLSEHQPDLLLENLGELAQLQAFLGVADEIAR HHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKLLLWDIDGTLIRSHGRSLEAFKAAFQRVYEVDLPLSSTAGKTDGLIVRETLHSWEEAA CEEEEEECCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHHH ILERLEQFYAVYEGELQARFEYLQRETTILHGVHSALSHLQPHTIQSLLTGNLQRTAKIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEE LDAVDLSRHFRWEWGAFGSDSHIRNDLVPVALQRAQAAGWHGTFDDVVVIGDTPFDIACA EEEEEHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHH KIAGACSVAVASGKFSREQLSEHQPDLLLENLGELAQLQAFLGVADEIAR HHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA