| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is yecO [C]
Identifier: 159900494
GI number: 159900494
Start: 5080190
End: 5080897
Strand: Reverse
Name: yecO [C]
Synonym: Haur_3981
Alternate gene names: 159900494
Gene position: 5080897-5080190 (Counterclockwise)
Preceding gene: 159900495
Following gene: 159900467
Centisome position: 80.06
GC content: 51.27
Gene sequence:
>708_bases ATGGCCAAATCAACGGTTGAAACCATTCGTGCCCGCTTCGATGCTGATGTTGAGCGTTTTTCCAATTTGGAAACTGGCCA ATCGGCGACCGTCGATGCCCCTTTAGCAATGACGTTGGTTGCTCAAGCGGCTGCCGCCACTACTCCTAATGCTCGCCATG TCTTGGATATTGGCTGCGGCGCTGGCAATTACAGCCTACGAGTTTTGCAAGAATTACCCAACCTTGATGTGACGCTGATC GATTTGAGCTCGTCAATGCTTGAGCGAGCGCAACAACGGGTCGGTGCAGCCACAACTGGCAAGGTCACTGCTTTACAAGG CGATGTCCGCCAGCTTGAGTTGGGCAGTGAGCAGGTTGATATTATTGTGGCAGCGGCGGTATTTCACCACCTACGCGACG ATGCTGAATGGCAGGCGGTTTTTGCTCAATGTTATGCCGCCTTGCGTCCAGGTGGTTCGCTGTGGATTTTCGATCTGGTG GAGCATTCCAGTGAGGCCGTCCATAGTTTGATGTGGCAACGCTATGGTCAATATCTCAGCGATTTCCGCGATGAGGCTTA CCGCAACCAAGTATTTGAATATATCGAGATCGAAGATTCGCCGCGCCCATTACTCTGGCAAATTGACGTTTTGCGGAGCG TTGGCTTCCAAAAGCTGGATATTCTGCATAAAAATAGTTGTTTCGCCGCCTTTGGCGGGGTGAAATAA
Upstream 100 bases:
>100_bases AAAAGAGCACTAAATCTGTCTTATATTGATCAGTACAAAATTACTCAAACCTGCTAAAATAGCGCGATTGACGCTTATTT GTGGTTTGAGGATGTTCCCC
Downstream 100 bases:
>100_bases GCTAATGTGCACGGGGAATAAAGTTGGAAACTGGAAACATTCGATTTTACGCTCAAAGCGGCTAAGTTTCACGGTTCTTG TATGCGCTAAAGTTGGAAAC
Product: type 12 methyltransferase
Products: NA
Alternate protein names: SAM-Dependent Methyltransferase
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MAKSTVETIRARFDADVERFSNLETGQSATVDAPLAMTLVAQAAAATTPNARHVLDIGCGAGNYSLRVLQELPNLDVTLI DLSSSMLERAQQRVGAATTGKVTALQGDVRQLELGSEQVDIIVAAAVFHHLRDDAEWQAVFAQCYAALRPGGSLWIFDLV EHSSEAVHSLMWQRYGQYLSDFRDEAYRNQVFEYIEIEDSPRPLLWQIDVLRSVGFQKLDILHKNSCFAAFGGVK
Sequences:
>Translated_235_residues MAKSTVETIRARFDADVERFSNLETGQSATVDAPLAMTLVAQAAAATTPNARHVLDIGCGAGNYSLRVLQELPNLDVTLI DLSSSMLERAQQRVGAATTGKVTALQGDVRQLELGSEQVDIIVAAAVFHHLRDDAEWQAVFAQCYAALRPGGSLWIFDLV EHSSEAVHSLMWQRYGQYLSDFRDEAYRNQVFEYIEIEDSPRPLLWQIDVLRSVGFQKLDILHKNSCFAAFGGVK >Mature_234_residues AKSTVETIRARFDADVERFSNLETGQSATVDAPLAMTLVAQAAAATTPNARHVLDIGCGAGNYSLRVLQELPNLDVTLID LSSSMLERAQQRVGAATTGKVTALQGDVRQLELGSEQVDIIVAAAVFHHLRDDAEWQAVFAQCYAALRPGGSLWIFDLVE HSSEAVHSLMWQRYGQYLSDFRDEAYRNQVFEYIEIEDSPRPLLWQIDVLRSVGFQKLDILHKNSCFAAFGGVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26002; Mature: 25870
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSTVETIRARFDADVERFSNLETGQSATVDAPLAMTLVAQAAAATTPNARHVLDIGCG CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCC AGNYSLRVLQELPNLDVTLIDLSSSMLERAQQRVGAATTGKVTALQGDVRQLELGSEQVD CCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHCCCCHHH IIVAAAVFHHLRDDAEWQAVFAQCYAALRPGGSLWIFDLVEHSSEAVHSLMWQRYGQYLS HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHH DFRDEAYRNQVFEYIEIEDSPRPLLWQIDVLRSVGFQKLDILHKNSCFAAFGGVK HHHHHHHHHHHHHEEEECCCCCCEEEHHHHHHHCCCHHHHHHCCCCCHHHCCCCC >Mature Secondary Structure AKSTVETIRARFDADVERFSNLETGQSATVDAPLAMTLVAQAAAATTPNARHVLDIGCG CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCC AGNYSLRVLQELPNLDVTLIDLSSSMLERAQQRVGAATTGKVTALQGDVRQLELGSEQVD CCCHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCHHHHHCCCCHHH IIVAAAVFHHLRDDAEWQAVFAQCYAALRPGGSLWIFDLVEHSSEAVHSLMWQRYGQYLS HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEHHHHHCCHHHHHHHHHHHHHHHHH DFRDEAYRNQVFEYIEIEDSPRPLLWQIDVLRSVGFQKLDILHKNSCFAAFGGVK HHHHHHHHHHHHHEEEECCCCCCEEEHHHHHHHCCCHHHHHHCCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA