| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900467
Identifier: 159900467
GI number: 159900467
Start: 4960950
End: 4962131
Strand: Reverse
Name: 159900467
Synonym: Haur_3954
Alternate gene names: NA
Gene position: 4962131-4960950 (Counterclockwise)
Preceding gene: 159900494
Following gene: 159900462
Centisome position: 78.19
GC content: 43.91
Gene sequence:
>1182_bases GTGCTTGGGTTTATTTGGGATAATGTTGCGCCGCTTCTCTTTCTCTGGAGCATGATTGGGTGTATGCTTGCGCATCGGCA CTGGACACAAGTGTTGCGCGTATGCCAATTCCTTCGAACCATACCACCTCAAATCGAAACAGTATGGAAAACGCCTCCTC AGACTCACAATCCTCAAGAAAATAATTTCAGCATTCATTCTCAACCAACACAAGCATGCCTTATCAAACCAACATTTACG CATTTAAAAACTATTCCCGAAACGGGAATGGCCTTATTAAATCCACCCACACTTAACGCGACTTTTGACTATCTTCAATC GATTGAGCCACAAGCACGTTATCTCTTGCCCTATGGATGGTATATTCCGTCTAACCAAGGACAAATGCCAGATGCGGCAT ATGCCGATCTTGGTGCCGATACCTATAACGTGGCTATTATTAGTCCAGAAGGCTATGGGAAAACAGCATGGGTTTTGTCT GGAATGATGGCACTAATGCTCCAGCGAACACCTCGTGAGCTTCAATTTGTCATTTTTAATACTAAGGATGCGGATATTAA CTTAATGGAAAACTCTGCCTATACACTGTTGTTCGCACAGAGTATTCAGGGAATACTGGACTCTATCAAACAATTACATG CTGAAGCAAAACGTCGGGCTGAGGTACTGGCAGCGCATCATGTTCTCACATGGAACACCTATCACGGTGACGATTTACCT TTGATCGTTGTCTATATTGCCGACCCTACTGCCATAAGTAGCGCGATTGGTAAGAAACTTGTTGAGAAGGCCCTTACTCT GCTCATGATGTATGGCCCTGCATTAGGGTTTCGAATTATTATTGAAAGTCGCAATATGTCGGATCTTGCGCCCTGTTACC ACCATTTTTTCTCAGATCGACTTCTTGGTCCAATGGATAAAGATCCCATTTTTCAGCAGAATGGCAAGCGAATGCCTATA CGGACTATATTCAACAATAGTGCTATTGCACCAACGCAACTACCCAACGAGTATCCAGGTGTATTTACTGCGGTTGATGC TCACGGTCGTGCAGTAACCCTGCGAACCGTTTATATTTCTCCCGAGGCCCAGAAAGATTGGATGATCTCGCAATCAAAAG ATTTGCAAACCTTAACTACAACTCAGGAACCTCATGGAAGCAGTATTCCACAACCAATTTAA
Upstream 100 bases:
>100_bases AAAGCTATCATATGCAGCCCATATTCTTAATCCAAAATGGATTAATTATGCTATGATAATGCTAGAATCGATGAGGTTCA AACACGGTGTAGGAGGCTTC
Downstream 100 bases:
>100_bases TTGAATAAAATGGCTCATTTATTATTGGGTTGATATGGTATAGCATGAGACACAGTTGTCTTAGCTCCTGACATTTGCAC AGTGTGTTCTTGCATTCTCT
Product: cell divisionFtsK/SpoIIIE
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MLGFIWDNVAPLLFLWSMIGCMLAHRHWTQVLRVCQFLRTIPPQIETVWKTPPQTHNPQENNFSIHSQPTQACLIKPTFT HLKTIPETGMALLNPPTLNATFDYLQSIEPQARYLLPYGWYIPSNQGQMPDAAYADLGADTYNVAIISPEGYGKTAWVLS GMMALMLQRTPRELQFVIFNTKDADINLMENSAYTLLFAQSIQGILDSIKQLHAEAKRRAEVLAAHHVLTWNTYHGDDLP LIVVYIADPTAISSAIGKKLVEKALTLLMMYGPALGFRIIIESRNMSDLAPCYHHFFSDRLLGPMDKDPIFQQNGKRMPI RTIFNNSAIAPTQLPNEYPGVFTAVDAHGRAVTLRTVYISPEAQKDWMISQSKDLQTLTTTQEPHGSSIPQPI
Sequences:
>Translated_393_residues MLGFIWDNVAPLLFLWSMIGCMLAHRHWTQVLRVCQFLRTIPPQIETVWKTPPQTHNPQENNFSIHSQPTQACLIKPTFT HLKTIPETGMALLNPPTLNATFDYLQSIEPQARYLLPYGWYIPSNQGQMPDAAYADLGADTYNVAIISPEGYGKTAWVLS GMMALMLQRTPRELQFVIFNTKDADINLMENSAYTLLFAQSIQGILDSIKQLHAEAKRRAEVLAAHHVLTWNTYHGDDLP LIVVYIADPTAISSAIGKKLVEKALTLLMMYGPALGFRIIIESRNMSDLAPCYHHFFSDRLLGPMDKDPIFQQNGKRMPI RTIFNNSAIAPTQLPNEYPGVFTAVDAHGRAVTLRTVYISPEAQKDWMISQSKDLQTLTTTQEPHGSSIPQPI >Mature_393_residues MLGFIWDNVAPLLFLWSMIGCMLAHRHWTQVLRVCQFLRTIPPQIETVWKTPPQTHNPQENNFSIHSQPTQACLIKPTFT HLKTIPETGMALLNPPTLNATFDYLQSIEPQARYLLPYGWYIPSNQGQMPDAAYADLGADTYNVAIISPEGYGKTAWVLS GMMALMLQRTPRELQFVIFNTKDADINLMENSAYTLLFAQSIQGILDSIKQLHAEAKRRAEVLAAHHVLTWNTYHGDDLP LIVVYIADPTAISSAIGKKLVEKALTLLMMYGPALGFRIIIESRNMSDLAPCYHHFFSDRLLGPMDKDPIFQQNGKRMPI RTIFNNSAIAPTQLPNEYPGVFTAVDAHGRAVTLRTVYISPEAQKDWMISQSKDLQTLTTTQEPHGSSIPQPI
Specific function: Unknown
COG id: COG1674
COG function: function code D; DNA segregation ATPase FtsK/SpoIIIE and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44231; Mature: 44231
Theoretical pI: Translated: 7.00; Mature: 7.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGFIWDNVAPLLFLWSMIGCMLAHRHWTQVLRVCQFLRTIPPQIETVWKTPPQTHNPQE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCC NNFSIHSQPTQACLIKPTFTHLKTIPETGMALLNPPTLNATFDYLQSIEPQARYLLPYGW CCEEEECCCCCEEEECCHHHHHHHCCCCCCEEECCCCCCHHHHHHHCCCCCCEEEEEEEE YIPSNQGQMPDAAYADLGADTYNVAIISPEGYGKTAWVLSGMMALMLQRTPRELQFVIFN EECCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEE TKDADINLMENSAYTLLFAQSIQGILDSIKQLHAEAKRRAEVLAAHHVLTWNTYHGDDLP CCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCC LIVVYIADPTAISSAIGKKLVEKALTLLMMYGPALGFRIIIESRNMSDLAPCYHHFFSDR EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHH LLGPMDKDPIFQQNGKRMPIRTIFNNSAIAPTQLPNEYPGVFTAVDAHGRAVTLRTVYIS CCCCCCCCCCHHCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEC PEAQKDWMISQSKDLQTLTTTQEPHGSSIPQPI CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure MLGFIWDNVAPLLFLWSMIGCMLAHRHWTQVLRVCQFLRTIPPQIETVWKTPPQTHNPQE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCC NNFSIHSQPTQACLIKPTFTHLKTIPETGMALLNPPTLNATFDYLQSIEPQARYLLPYGW CCEEEECCCCCEEEECCHHHHHHHCCCCCCEEECCCCCCHHHHHHHCCCCCCEEEEEEEE YIPSNQGQMPDAAYADLGADTYNVAIISPEGYGKTAWVLSGMMALMLQRTPRELQFVIFN EECCCCCCCCCHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEE TKDADINLMENSAYTLLFAQSIQGILDSIKQLHAEAKRRAEVLAAHHVLTWNTYHGDDLP CCCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCC LIVVYIADPTAISSAIGKKLVEKALTLLMMYGPALGFRIIIESRNMSDLAPCYHHFFSDR EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHH LLGPMDKDPIFQQNGKRMPIRTIFNNSAIAPTQLPNEYPGVFTAVDAHGRAVTLRTVYIS CCCCCCCCCCHHCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEC PEAQKDWMISQSKDLQTLTTTQEPHGSSIPQPI CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA