| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159900493
Identifier: 159900493
GI number: 159900493
Start: 5079474
End: 5079830
Strand: Direct
Name: 159900493
Synonym: Haur_3980
Alternate gene names: NA
Gene position: 5079474-5079830 (Clockwise)
Preceding gene: 159900492
Following gene: 159900498
Centisome position: 80.03
GC content: 61.06
Gene sequence:
>357_bases ATGTGGCAGGTCGTCGTGCCCCAGCGACACGGTCGTCCGTGCGGACGACCGCTCCAACTGTCAGGTGATCGCAGCTACGA TGCCCGCCGTATCGTCCACTGGCTTCAGCAGTATGGGATTCGATCGGTGATTCCGCCACGCCGCCGATGCGGGATGCGCA AGGCTGGTCCGGTCGGCTATGACGCAGCGGCCTATCGTGCCCTCAATGTGGTCGAAGGCACCATTGTGTGCCTGAAAGAG TGCCGTTCGGTCGCCACGTGGTTTGAGAAACTGGCGCTGAACGATCGCGGATTCGTCCATCTGGCCATGATTCAACGCGT GGTTCGCATCCTGGCACCATCCACATCGCTATCCTGA
Upstream 100 bases:
>100_bases AGAGCCAGTATCGGGCGACGATTGACAACCTTCTCGTCGATGGTCGCGGTCACCCGTTATGTGCCTGTCTCACGCCCGGC AGACCCACGAAAGTACCGTG
Downstream 100 bases:
>100_bases ATTATCAGATAGAGCCTACTTTTTGTTGAAACGAATCTGCAGGCACTATAAGATATTTAGCCACTTGGAAGGAAAACTCT CATACCTTACGAATAGTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MWQVVVPQRHGRPCGRPLQLSGDRSYDARRIVHWLQQYGIRSVIPPRRRCGMRKAGPVGYDAAAYRALNVVEGTIVCLKE CRSVATWFEKLALNDRGFVHLAMIQRVVRILAPSTSLS
Sequences:
>Translated_118_residues MWQVVVPQRHGRPCGRPLQLSGDRSYDARRIVHWLQQYGIRSVIPPRRRCGMRKAGPVGYDAAAYRALNVVEGTIVCLKE CRSVATWFEKLALNDRGFVHLAMIQRVVRILAPSTSLS >Mature_118_residues MWQVVVPQRHGRPCGRPLQLSGDRSYDARRIVHWLQQYGIRSVIPPRRRCGMRKAGPVGYDAAAYRALNVVEGTIVCLKE CRSVATWFEKLALNDRGFVHLAMIQRVVRILAPSTSLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13386; Mature: 13386
Theoretical pI: Translated: 11.30; Mature: 11.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWQVVVPQRHGRPCGRPLQLSGDRSYDARRIVHWLQQYGIRSVIPPRRRCGMRKAGPVGY CCEECCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCC DAAAYRALNVVEGTIVCLKECRSVATWFEKLALNDRGFVHLAMIQRVVRILAPSTSLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MWQVVVPQRHGRPCGRPLQLSGDRSYDARRIVHWLQQYGIRSVIPPRRRCGMRKAGPVGY CCEECCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCC DAAAYRALNVVEGTIVCLKECRSVATWFEKLALNDRGFVHLAMIQRVVRILAPSTSLS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA