| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159900484
Identifier: 159900484
GI number: 159900484
Start: 5048908
End: 5049978
Strand: Direct
Name: 159900484
Synonym: Haur_3971
Alternate gene names: NA
Gene position: 5048908-5049978 (Clockwise)
Preceding gene: 159900483
Following gene: 159900485
Centisome position: 79.55
GC content: 57.05
Gene sequence:
>1071_bases ATGGCCGTGCAGCAGACCGCCGAGCTGATCAAAGAAGAGAAAAAAAACAAATCGGTCAAGTGTGTCGTCTGGGATCTCGA CAACACGGTGTGGAAGGGCATCCTGCTCGAAGACGAGCATGTCACGCCCTTCCCCAACGTCGTCGCGGTGATCAAAGAGC TTGACAGCCGCGGCATCCTCAACTCGATCTCAAGCCGCAACGACCATGACCTAGCCGTGGCCAAGCTCGAGGAGCTGGGC CTGCTTGAGTATTTCCTGTACCCTCAGATCAACTGGAACTCCAAGGCCTCCTCGATCAAGGAGATTGCCAAGCTGATTAA CATCGGCCTCGATACCTTCGCCTTCGTTGACGACCAGCCCTTCGAGCGCGAAGAAGTCACCTTCGAAATCCCCGACATTC TGTGCATCGACGCGCTCGACGGCGAGAAAATCCTCGACATGCCGGAGATGATGCCGCGCTTTATCACCGAGGACTCCCGG CTGCGCCGCCAGATGTACCAGAGTGATATCTCGCGCAACGGGGCCGAGCAAGAGTTTCAAGGCTCCAACGAAGAGTTCCT GGCTACGCTGAAGATGGTCTTCACGCTGGCCCCGGCCCAGGAGGATGACCTGCAACGGGCCGAAGAGCTGACCCTGCGCA CCAACCAGCTCAACACCACCGGCTACACCTACTCTTACGACGAACTCAACGCGTTCCGCCACTCGGGCCGCCACAAGCTC TACATCGCCTCGCTGGACGATAAGTACGGCACCTACGGCAAAATCGGCCTGACTCTGGTCGAGTGCGGCGAGGAGATTTG GACAATCAAGCTGCTGCTGATGTCCTGCCGGGTCATGTCGCGGGGCGTGGGCACGATTATGATCAACCACGTTATGAACG AGTGCAAGCGGGCCGGGCGCCGCCTCCAAGCCGAGTTCGTTTCCAACAACCGCAACCGCATGATGTATATCACCTATAAG TTCGGCGGCTTCAACGAGGTCAACCGGATCGATGATCTGGTGATTTTCGAGAACGATCTGTCCAATATCCAACCGTTCCC GGAGTACGTCAAGGTCAACATTCTGGATTAG
Upstream 100 bases:
>100_bases CATGGAAATCATCGAGGCCAGCACCCAGCTCCAACAGATGAACATCGCCCAGTACGCCTACGAGTACTAAGGCATTTACA TAACGAAAGGAACCTTGCCA
Downstream 100 bases:
>100_bases GCCTGGCCGCGCCGACCGGGGCGTGGTTATTTGTCGGACGCATGTTTCTCAATCTGGCTGACGGGCAGGCGCTTGGCTTC GCGGGCGCGTCTGCCCCGCC
Product: FkbH like protein
Products: NA
Alternate protein names: FkbH Domain-Containing Protein; Modular Polyketide Synthase; FkbH-Like Protein; HAD Family Phosphatase; Amino Acid Adenylation Domain Protein; Phosphatase IIIC; FkbH Domain Protein; Methoxymalonate Biosynthesis Protein; HAD Family Phosphatase FbkH; Non-Ribosomal Peptide Synthetase; Involved In Methoxymalonyl-ACP Biosynthesis; FkbH-Protein; Polyketide Synthase Protein; Polyketide Synthase Subunit; Modular Polyketide Synthase Type I PKS; HAD-Superfamily Phosphatase Subfamily Protein; HAD-Superfamily Protein; Involved In Methoxymalonyl-ACP Biosynthesis-Like; FkbH Domain; Had-Superfamily Phosphatase Subfamily IIIcFkbh-Like Domain; HAD-Superfamily Phosphatase; HAD-Superfamily Phosphatase Subfamily IIIC; Fkbh Like Protein; Peptide Synthetase; Had-Superfamily Phosphatase Subfamily IIIc; Methoxymalonyl-ACP Biosynthesis Protein; Methoxymalonate Biosynthesis Protein HbmH
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MAVQQTAELIKEEKKNKSVKCVVWDLDNTVWKGILLEDEHVTPFPNVVAVIKELDSRGILNSISSRNDHDLAVAKLEELG LLEYFLYPQINWNSKASSIKEIAKLINIGLDTFAFVDDQPFEREEVTFEIPDILCIDALDGEKILDMPEMMPRFITEDSR LRRQMYQSDISRNGAEQEFQGSNEEFLATLKMVFTLAPAQEDDLQRAEELTLRTNQLNTTGYTYSYDELNAFRHSGRHKL YIASLDDKYGTYGKIGLTLVECGEEIWTIKLLLMSCRVMSRGVGTIMINHVMNECKRAGRRLQAEFVSNNRNRMMYITYK FGGFNEVNRIDDLVIFENDLSNIQPFPEYVKVNILD
Sequences:
>Translated_356_residues MAVQQTAELIKEEKKNKSVKCVVWDLDNTVWKGILLEDEHVTPFPNVVAVIKELDSRGILNSISSRNDHDLAVAKLEELG LLEYFLYPQINWNSKASSIKEIAKLINIGLDTFAFVDDQPFEREEVTFEIPDILCIDALDGEKILDMPEMMPRFITEDSR LRRQMYQSDISRNGAEQEFQGSNEEFLATLKMVFTLAPAQEDDLQRAEELTLRTNQLNTTGYTYSYDELNAFRHSGRHKL YIASLDDKYGTYGKIGLTLVECGEEIWTIKLLLMSCRVMSRGVGTIMINHVMNECKRAGRRLQAEFVSNNRNRMMYITYK FGGFNEVNRIDDLVIFENDLSNIQPFPEYVKVNILD >Mature_355_residues AVQQTAELIKEEKKNKSVKCVVWDLDNTVWKGILLEDEHVTPFPNVVAVIKELDSRGILNSISSRNDHDLAVAKLEELGL LEYFLYPQINWNSKASSIKEIAKLINIGLDTFAFVDDQPFEREEVTFEIPDILCIDALDGEKILDMPEMMPRFITEDSRL RRQMYQSDISRNGAEQEFQGSNEEFLATLKMVFTLAPAQEDDLQRAEELTLRTNQLNTTGYTYSYDELNAFRHSGRHKLY IASLDDKYGTYGKIGLTLVECGEEIWTIKLLLMSCRVMSRGVGTIMINHVMNECKRAGRRLQAEFVSNNRNRMMYITYKF GGFNEVNRIDDLVIFENDLSNIQPFPEYVKVNILD
Specific function: Unknown
COG id: COG3882
COG function: function code Q; Predicted enzyme involved in methoxymalonyl-ACP biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41027; Mature: 40896
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVQQTAELIKEEKKNKSVKCVVWDLDNTVWKGILLEDEHVTPFPNVVAVIKELDSRGIL CCHHHHHHHHHHHHCCCCEEEEEEECCCCHHCCEEEECCCCCCCHHHHHHHHHHHCCHHH NSISSRNDHDLAVAKLEELGLLEYFLYPQINWNSKASSIKEIAKLINIGLDTFAFVDDQP HHHCCCCCCCHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHEEECCCCC FEREEVTFEIPDILCIDALDGEKILDMPEMMPRFITEDSRLRRQMYQSDISRNGAEQEFQ CCCCCEEEECCCEEEEECCCCCHHCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHC GSNEEFLATLKMVFTLAPAQEDDLQRAEELTLRTNQLNTTGYTYSYDELNAFRHSGRHKL CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCEE YIASLDDKYGTYGKIGLTLVECGEEIWTIKLLLMSCRVMSRGVGTIMINHVMNECKRAGR EEEECCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH RLQAEFVSNNRNRMMYITYKFGGFNEVNRIDDLVIFENDLSNIQPFPEYVKVNILD HHHHHHHCCCCCEEEEEEEECCCCCCHHHHCCEEEEECCCCCCCCCCCCEEEEECC >Mature Secondary Structure AVQQTAELIKEEKKNKSVKCVVWDLDNTVWKGILLEDEHVTPFPNVVAVIKELDSRGIL CHHHHHHHHHHHHCCCCEEEEEEECCCCHHCCEEEECCCCCCCHHHHHHHHHHHCCHHH NSISSRNDHDLAVAKLEELGLLEYFLYPQINWNSKASSIKEIAKLINIGLDTFAFVDDQP HHHCCCCCCCHHHHHHHHHCHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHEEECCCCC FEREEVTFEIPDILCIDALDGEKILDMPEMMPRFITEDSRLRRQMYQSDISRNGAEQEFQ CCCCCEEEECCCEEEEECCCCCHHCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHC GSNEEFLATLKMVFTLAPAQEDDLQRAEELTLRTNQLNTTGYTYSYDELNAFRHSGRHKL CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHCCCCEE YIASLDDKYGTYGKIGLTLVECGEEIWTIKLLLMSCRVMSRGVGTIMINHVMNECKRAGR EEEECCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH RLQAEFVSNNRNRMMYITYKFGGFNEVNRIDDLVIFENDLSNIQPFPEYVKVNILD HHHHHHHCCCCCEEEEEEEECCCCCCHHHHCCEEEEECCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA