Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900458

Identifier: 159900458

GI number: 159900458

Start: 4942668

End: 4943201

Strand: Reverse

Name: 159900458

Synonym: Haur_3943

Alternate gene names: NA

Gene position: 4943201-4942668 (Counterclockwise)

Preceding gene: 159900459

Following gene: 159900457

Centisome position: 77.89

GC content: 47.75

Gene sequence:

>534_bases
ATGCTCAAGCTACAAAAAAAGCGTAAACAAGCAGGCCAAGCCTTGGTTGAATTTGCGCTCACGATAACAGTGTTATTCAC
GTTTCTTTCAGGCATTATTGATGGTGCTCTGGCCTTTTTTGCCTACCAAGGGCTGAAGGGCGCTGCCTATGAAGCGGTTT
CATATGGCTCGTTGTTCCCACTGCGCAGCGATGGAACGATCAATACTCAAGAAATCCGCGACCGATTGCGCTATGAGAGT
GGTGCGCCAAACAATAATTCCGGTTTACGCTACGTTAATTTATTTGATCTTGATAATAGTGGAGGCCCCGATCCTGAGGG
TGTCCTAAACCAGCGGATTCAAATTAGCTTTGTTGATGGGGCTGTAGCTGGAACAAGCCCACTCAATTGTGCGAACCCAG
CAACTCTAGCACGGCAGTTTTGCGATATTCGGGTGAGTGTACGCTACACCTACCGATCATTTTTTTTCGCGGCTTCAATC
TTTGGAGCTGACACGATCGACCTAACCGCAACCCAACAACAAACCATACCCTAG

Upstream 100 bases:

>100_bases
GTTGAAATTGATGCAACCTCACGCCGCACGATTGTCCGCTATGATTTTTCGAGTATTGATCCGCTGTCTGTTTGCCGTTA
ATCAATGAGGGTATCTGACC

Downstream 100 bases:

>100_bases
TTAATACTTATCACGATCCGTGGTATTGATTTTTACTTTTACGGAGGATTGGCTATGAACTTAAGTCGCATGACGCGACG
TGTAGCCCAACCAGTCGCAG

Product: TadE family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MLKLQKKRKQAGQALVEFALTITVLFTFLSGIIDGALAFFAYQGLKGAAYEAVSYGSLFPLRSDGTINTQEIRDRLRYES
GAPNNNSGLRYVNLFDLDNSGGPDPEGVLNQRIQISFVDGAVAGTSPLNCANPATLARQFCDIRVSVRYTYRSFFFAASI
FGADTIDLTATQQQTIP

Sequences:

>Translated_177_residues
MLKLQKKRKQAGQALVEFALTITVLFTFLSGIIDGALAFFAYQGLKGAAYEAVSYGSLFPLRSDGTINTQEIRDRLRYES
GAPNNNSGLRYVNLFDLDNSGGPDPEGVLNQRIQISFVDGAVAGTSPLNCANPATLARQFCDIRVSVRYTYRSFFFAASI
FGADTIDLTATQQQTIP
>Mature_177_residues
MLKLQKKRKQAGQALVEFALTITVLFTFLSGIIDGALAFFAYQGLKGAAYEAVSYGSLFPLRSDGTINTQEIRDRLRYES
GAPNNNSGLRYVNLFDLDNSGGPDPEGVLNQRIQISFVDGAVAGTSPLNCANPATLARQFCDIRVSVRYTYRSFFFAASI
FGADTIDLTATQQQTIP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19321; Mature: 19321

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLQKKRKQAGQALVEFALTITVLFTFLSGIIDGALAFFAYQGLKGAAYEAVSYGSLFP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCE
LRSDGTINTQEIRDRLRYESGAPNNNSGLRYVNLFDLDNSGGPDPEGVLNQRIQISFVDG
ECCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHCCCEEEEEECC
AVAGTSPLNCANPATLARQFCDIRVSVRYTYRSFFFAASIFGADTIDLTATQQQTIP
CCCCCCCCCCCCHHHHHHHHHCEEEEEEHHHHHHHHHHHHHCCCCEEEECCCCCCCC
>Mature Secondary Structure
MLKLQKKRKQAGQALVEFALTITVLFTFLSGIIDGALAFFAYQGLKGAAYEAVSYGSLFP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCE
LRSDGTINTQEIRDRLRYESGAPNNNSGLRYVNLFDLDNSGGPDPEGVLNQRIQISFVDG
ECCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHCCCEEEEEECC
AVAGTSPLNCANPATLARQFCDIRVSVRYTYRSFFFAASIFGADTIDLTATQQQTIP
CCCCCCCCCCCCHHHHHHHHHCEEEEEEHHHHHHHHHHHHHCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA