Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159900361

Identifier: 159900361

GI number: 159900361

Start: 4827115

End: 4827555

Strand: Direct

Name: 159900361

Synonym: Haur_3844

Alternate gene names: NA

Gene position: 4827115-4827555 (Clockwise)

Preceding gene: 159900360

Following gene: 159900362

Centisome position: 76.06

GC content: 50.57

Gene sequence:

>441_bases
ATGAAGGCCAATAGTATGTCAACCAGCGATTCAGATTCACAAGAGATTAAATTGCGCCGCGCCAAGCGCCCCAAGGGCAT
TGTGCTGATGGTACTAGCCTTTTATGGAGCCGCCGCGTTGGTGGTGATTTCCGCCTTGGCAACGGGCGGAACTGATGTCA
TGCCTAGCGATGTGGCCAGTGTCGTCACGATTTACCTGATTGCATTGGCGTTTGGCTTATGGCGCTTGTGGCGGTGGGCG
TGGTTTGCCACCGTGATTATGTTTATTCTGAGCACCTTTTATGTGTTCAGCAATGCCCTGCTGCTGAGCAACTCGATCAT
CAGCGTCGAGGTACTATCGCCGTTACTGTTGATTGTGCTGGCTTTGGGCTATTTGCTCTCCAAAGATATTCGCACAATCT
ATTTGCGCAATGGTTGGGAGATTGTAAAGGATGAGGGATGA

Upstream 100 bases:

>100_bases
CCAATTCGCCGTTGGGATGGCGTAGGCGAAAATCGGGTCTTTACCGACGACCTCGCCCCAGTTGAATCGGTGATCGACCG
AATTATTTTGGGGCAGGTTG

Downstream 100 bases:

>100_bases
GGGATGAAAGATGTGAGAATTAGCGGATTATTCGTGCAATTCGTGTAATTCGTGGCAAAAAACTAAACCTTCATGTCCTT
CGTGCCCTTCGTGGATCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MKANSMSTSDSDSQEIKLRRAKRPKGIVLMVLAFYGAAALVVISALATGGTDVMPSDVASVVTIYLIALAFGLWRLWRWA
WFATVIMFILSTFYVFSNALLLSNSIISVEVLSPLLLIVLALGYLLSKDIRTIYLRNGWEIVKDEG

Sequences:

>Translated_146_residues
MKANSMSTSDSDSQEIKLRRAKRPKGIVLMVLAFYGAAALVVISALATGGTDVMPSDVASVVTIYLIALAFGLWRLWRWA
WFATVIMFILSTFYVFSNALLLSNSIISVEVLSPLLLIVLALGYLLSKDIRTIYLRNGWEIVKDEG
>Mature_146_residues
MKANSMSTSDSDSQEIKLRRAKRPKGIVLMVLAFYGAAALVVISALATGGTDVMPSDVASVVTIYLIALAFGLWRLWRWA
WFATVIMFILSTFYVFSNALLLSNSIISVEVLSPLLLIVLALGYLLSKDIRTIYLRNGWEIVKDEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16134; Mature: 16134

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKANSMSTSDSDSQEIKLRRAKRPKGIVLMVLAFYGAAALVVISALATGGTDVMPSDVAS
CCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
VVTIYLIALAFGLWRLWRWAWFATVIMFILSTFYVFSNALLLSNSIISVEVLSPLLLIVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ALGYLLSKDIRTIYLRNGWEIVKDEG
HHHHHHHHHHHHEEEECCEEEECCCC
>Mature Secondary Structure
MKANSMSTSDSDSQEIKLRRAKRPKGIVLMVLAFYGAAALVVISALATGGTDVMPSDVAS
CCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
VVTIYLIALAFGLWRLWRWAWFATVIMFILSTFYVFSNALLLSNSIISVEVLSPLLLIVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
ALGYLLSKDIRTIYLRNGWEIVKDEG
HHHHHHHHHHHHEEEECCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA