| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900351
Identifier: 159900351
GI number: 159900351
Start: 4813864
End: 4814559
Strand: Reverse
Name: 159900351
Synonym: Haur_3834
Alternate gene names: NA
Gene position: 4814559-4813864 (Counterclockwise)
Preceding gene: 159900355
Following gene: 159900350
Centisome position: 75.86
GC content: 51.01
Gene sequence:
>696_bases ATGCATGGATTAATGATTTTTTCGGGATTATTTGGTGCGTTGGCAGTCATCTTCTGGTTCTTCGGTCAGCCAATTTGGTC ATTGTTAAATGTCCCCCGTCAACTCAATCAATTGTGGCAAGGTGTGGCTGTGCGGCGTAATCACGCAATCGAGCACGCCA CAGTCAATGTGCTCGAAGAGCGCTATGGTTCGCAATTGGTCGATGGCTGTGCGACAACCGAAGGCTTTCGCATTCGCGCC GCGATTGATCCAGCGTTGTTGTTCGATGCTGCCCGTGAAGGCTTGTTACGCCTGCAACGCGGCGAACGCTCGATGGCGAT TTATCGCCGTTGTGCAACGGCCTTGAGTTTTTGTTTCCTGACCGTTGCTTCGATCGGCCTTGGCATGGTTGCTTTCCTCG ATATGTTGTCAAGTACCAGTATTTTCTTGGCATTAACCATTGCTGGCGCACTTACCCCCAAGTTAAGCCCACTTTTTCAA CGCTTTTTTACAACTTCGCTCGATGTTAAGGGTATGAGTATTGGCGCGATTGAGTTAGTGCCACCAACCTTGTTTATGGG CTTGTCGTTTGCTGCTGGCGGCGCAGAGTTTGCCGTGCGCACCAAACCAGCTCGGCGCATTTATCAACCCCCCTATCGCT ATGGCGAACGGGTTCCGGTGTATGTGCCAGTCGAAAATAATACCCGCCAACGCTAA
Upstream 100 bases:
>100_bases CGTAAAGTACTTATGTCTGCCTTGACGGCTACTCAGTGGCGTGATACGCTGCTTTTATTGGTACTTTACAGCTTGTTAAC TGCCACGGGAAGGAAAGCCT
Downstream 100 bases:
>100_bases ATCTGGATTCAATTCAAATCAAAGGCCGAAGTTGCTTACTTCGGCTTTTTTGTTGCCCAACAAAACTCACCCTTGTGTCT ACCCTTGGGGATGACCCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MHGLMIFSGLFGALAVIFWFFGQPIWSLLNVPRQLNQLWQGVAVRRNHAIEHATVNVLEERYGSQLVDGCATTEGFRIRA AIDPALLFDAAREGLLRLQRGERSMAIYRRCATALSFCFLTVASIGLGMVAFLDMLSSTSIFLALTIAGALTPKLSPLFQ RFFTTSLDVKGMSIGAIELVPPTLFMGLSFAAGGAEFAVRTKPARRIYQPPYRYGERVPVYVPVENNTRQR
Sequences:
>Translated_231_residues MHGLMIFSGLFGALAVIFWFFGQPIWSLLNVPRQLNQLWQGVAVRRNHAIEHATVNVLEERYGSQLVDGCATTEGFRIRA AIDPALLFDAAREGLLRLQRGERSMAIYRRCATALSFCFLTVASIGLGMVAFLDMLSSTSIFLALTIAGALTPKLSPLFQ RFFTTSLDVKGMSIGAIELVPPTLFMGLSFAAGGAEFAVRTKPARRIYQPPYRYGERVPVYVPVENNTRQR >Mature_231_residues MHGLMIFSGLFGALAVIFWFFGQPIWSLLNVPRQLNQLWQGVAVRRNHAIEHATVNVLEERYGSQLVDGCATTEGFRIRA AIDPALLFDAAREGLLRLQRGERSMAIYRRCATALSFCFLTVASIGLGMVAFLDMLSSTSIFLALTIAGALTPKLSPLFQ RFFTTSLDVKGMSIGAIELVPPTLFMGLSFAAGGAEFAVRTKPARRIYQPPYRYGERVPVYVPVENNTRQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25608; Mature: 25608
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGLMIFSGLFGALAVIFWFFGQPIWSLLNVPRQLNQLWQGVAVRRNHAIEHATVNVLEE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYGSQLVDGCATTEGFRIRAAIDPALLFDAAREGLLRLQRGERSMAIYRRCATALSFCFL HHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH TVASIGLGMVAFLDMLSSTSIFLALTIAGALTPKLSPLFQRFFTTSLDVKGMSIGAIELV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEECEEECC PPTLFMGLSFAAGGAEFAVRTKPARRIYQPPYRYGERVPVYVPVENNTRQR CHHHHHHHHHCCCCCCEEEECCHHHHHCCCCHHCCCCCEEEEECCCCCCCC >Mature Secondary Structure MHGLMIFSGLFGALAVIFWFFGQPIWSLLNVPRQLNQLWQGVAVRRNHAIEHATVNVLEE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYGSQLVDGCATTEGFRIRAAIDPALLFDAAREGLLRLQRGERSMAIYRRCATALSFCFL HHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH TVASIGLGMVAFLDMLSSTSIFLALTIAGALTPKLSPLFQRFFTTSLDVKGMSIGAIELV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEECEEECC PPTLFMGLSFAAGGAEFAVRTKPARRIYQPPYRYGERVPVYVPVENNTRQR CHHHHHHHHHCCCCCCEEEECCHHHHHCCCCHHCCCCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA