| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900350
Identifier: 159900350
GI number: 159900350
Start: 4812942
End: 4813754
Strand: Reverse
Name: 159900350
Synonym: Haur_3833
Alternate gene names: NA
Gene position: 4813754-4812942 (Counterclockwise)
Preceding gene: 159900351
Following gene: 159900348
Centisome position: 75.85
GC content: 49.32
Gene sequence:
>813_bases ATGAACGAACAGCGTATCTCAATTGGTAACTTTGCCCAAGCAACTCGCCTATCGCTCAAAGCCTTGCGGATGTACGATCA ATTAGGCATCTTAGCGGCTCACTATGTCGATCCACAGACTGGCTATCGTTATTATCAGGCTGAGCAACTGGCCACTGCTC GCTTGATTGGTATGTTGCGTCAAATTAACATGCCACTTGCCACGATTCGCCAATTGATTAATGCTTCCGCTAAAGATGCC GAGATTTTGCTTAGCCGCTACATTCGTTCAGTCGAGTTGCAGGCAATCCAAGCCCGTCGTGCCCAAAGCCTCATCCTCGG GTTAATTCGTCAAGAAGGAGTTTGTATGAGCCTTGAAGTAACTGTCCGCCAACAAGCCGATCAGCCCATCCTCAGCATCA CCAAACGCACGTTTGTTAACGAGTTGGATAATGTGATTGCGCATGCCTTCCACACGATGGAACGTTTTGCCGCTGACCAT CATTTAGTTGTGCGTGGCTCTGCGTTTGGCATTTTTCACGGCACGATTAACGCCGATGATGATGGCCCGATTGAAGTTTG TTTACCTGTTGATCAGCTTGTCGAGTCGCAAGGCGAGATAGTTGGGCGAATTTTGCCTGCTGGTAAAGTTGCAGTTGTGA CAATGCACGGCGATCAGTGTGAGTTTCCGCATATTTTGGCGGGCTACGATGCTGGTAGCGATTGGGTCAAAGCTAATGGT TATGTGGTTTCCGATTCACCGCGCGAAATCTGGATCAACCCGCCTGGCCCTGATGCTTTGATGGAAATCGCTTGGCCATT CCACGAAGCCTAA
Upstream 100 bases:
>100_bases CAATTCAAATCAAAGGCCGAAGTTGCTTACTTCGGCTTTTTTGTTGCCCAACAAAACTCACCCTTGTGTCTACCCTTGGG GATGACCCTATACTAGCGCT
Downstream 100 bases:
>100_bases AATGTGCCCTCACCCCCTTGCCCCCTCTCCCGCCGAGCGAGCGAGGGGGAACCACCGTATCATAACTATTGGAACTCCCC TCGCCCGCGTTTTCGTGGGA
Product: MerR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Regulatory Protein; Magnesium Or Manganese-Dependent Protein Phosphatase; MerR-Family Transcriptional Regulator; Protein Serine/Threonine Phosphatase; Phosphoprotein Phosphatase; DNA Polymerase III Beta Subunit; DNA Polymerase III Subunit Beta; DNA Polymerase III Beta Chain; Serine/Threonine Protein Phosphatase; Regulatory Protein MerR; DeoR Family Transcriptional Regulator; Protein Phosphatase; MerR-Family Protein Transcriptional Regulator
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MNEQRISIGNFAQATRLSLKALRMYDQLGILAAHYVDPQTGYRYYQAEQLATARLIGMLRQINMPLATIRQLINASAKDA EILLSRYIRSVELQAIQARRAQSLILGLIRQEGVCMSLEVTVRQQADQPILSITKRTFVNELDNVIAHAFHTMERFAADH HLVVRGSAFGIFHGTINADDDGPIEVCLPVDQLVESQGEIVGRILPAGKVAVVTMHGDQCEFPHILAGYDAGSDWVKANG YVVSDSPREIWINPPGPDALMEIAWPFHEA
Sequences:
>Translated_270_residues MNEQRISIGNFAQATRLSLKALRMYDQLGILAAHYVDPQTGYRYYQAEQLATARLIGMLRQINMPLATIRQLINASAKDA EILLSRYIRSVELQAIQARRAQSLILGLIRQEGVCMSLEVTVRQQADQPILSITKRTFVNELDNVIAHAFHTMERFAADH HLVVRGSAFGIFHGTINADDDGPIEVCLPVDQLVESQGEIVGRILPAGKVAVVTMHGDQCEFPHILAGYDAGSDWVKANG YVVSDSPREIWINPPGPDALMEIAWPFHEA >Mature_270_residues MNEQRISIGNFAQATRLSLKALRMYDQLGILAAHYVDPQTGYRYYQAEQLATARLIGMLRQINMPLATIRQLINASAKDA EILLSRYIRSVELQAIQARRAQSLILGLIRQEGVCMSLEVTVRQQADQPILSITKRTFVNELDNVIAHAFHTMERFAADH HLVVRGSAFGIFHGTINADDDGPIEVCLPVDQLVESQGEIVGRILPAGKVAVVTMHGDQCEFPHILAGYDAGSDWVKANG YVVSDSPREIWINPPGPDALMEIAWPFHEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29998; Mature: 29998
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS00552 HTH_MERR_1 ; PS50937 HTH_MERR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEQRISIGNFAQATRLSLKALRMYDQLGILAAHYVDPQTGYRYYQAEQLATARLIGMLR CCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHH QINMPLATIRQLINASAKDAEILLSRYIRSVELQAIQARRAQSLILGLIRQEGVCMSLEV HCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE TVRQQADQPILSITKRTFVNELDNVIAHAFHTMERFAADHHLVVRGSAFGIFHGTINADD EEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEEEEEEECCCC DGPIEVCLPVDQLVESQGEIVGRILPAGKVAVVTMHGDQCEFPHILAGYDAGSDWVKANG CCCEEEEECHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCCCCEEECCCCCCCEEEECC YVVSDSPREIWINPPGPDALMEIAWPFHEA EEEECCCCEEEECCCCCHHHHHHCCCCCCC >Mature Secondary Structure MNEQRISIGNFAQATRLSLKALRMYDQLGILAAHYVDPQTGYRYYQAEQLATARLIGMLR CCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHH QINMPLATIRQLINASAKDAEILLSRYIRSVELQAIQARRAQSLILGLIRQEGVCMSLEV HCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE TVRQQADQPILSITKRTFVNELDNVIAHAFHTMERFAADHHLVVRGSAFGIFHGTINADD EEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEEEEEEECCCC DGPIEVCLPVDQLVESQGEIVGRILPAGKVAVVTMHGDQCEFPHILAGYDAGSDWVKANG CCCEEEEECHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCCCCEEECCCCCCCEEEECC YVVSDSPREIWINPPGPDALMEIAWPFHEA EEEECCCCEEEECCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA