Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900250

Identifier: 159900250

GI number: 159900250

Start: 4692470

End: 4693507

Strand: Reverse

Name: 159900250

Synonym: Haur_3733

Alternate gene names: NA

Gene position: 4693507-4692470 (Counterclockwise)

Preceding gene: 159900251

Following gene: 159900249

Centisome position: 73.95

GC content: 39.79

Gene sequence:

>1038_bases
ATGCCTATCCTTACCAACCTCAAACCGCGTTGGCACACCGCGTTGAGCATCGGCATGTTGCTAGCCGTGCTTGCTAGCGC
CGCTGGCTACTTCTATTGGGCAAGCCGACCATTTACGCTTGAGCAACTAGCGCCTGTGGATACACCAACCCTAGTGCATA
CAATCAAAGCTGACCCTAGAAAACCATTTGATCGGATTGTTCAATGGAACTCGCGTGGCGATCGATTAGCCGTATCAAGC
GATAAAAATAATATTCTGATTTATTCAAGTGCTGGTGAACTCGTGGCTGATTTTAGATCCCACCTTTTTATGGGGCTTGG
GATTAACGAGCTAGAATGGCATCCAACCAAGGATATTTTGGCTGTTGCCTACGACGAAAGATTGGTGTTATGGTCAGCCG
ATGGCACGATCATCAAACAAATTAATAGTGACATAACATTTGCGTTTTGGGATATAGATTGGAATCAACAAACCGAACAA
TTAGCAGTTAATCAATATTATGCATTTGATCGTAAATACTATCATCAAATTGCCCTATTTGATGATACAGGTGCATTGAT
TAAACAAATATCTCAATCAATTAATTTTACACGAGATATCAAATGGTTGGATGAAAATCAGATTGTAATCCATACTGCTA
ACGACGAAATTCTTGTATTAGATACCGAAAAAGAAATATTAAGTAGCTTAATTGCAGGTAAATATGCCGAAATGGATGTT
GATCAACAGCATCATACTATTGCTGCCGTTCCAACATCGCTAAAAGCTATTACTCTATGGAAGAATAATCAACTAACTGA
ATTGCCAGTTGATCGGATAGCTGGTGATGTTCTTGCGATTAACCCTGCCAGTAACCATACGATTATCTATCAACCAACAT
CTGAATTGCGAATGTTGAATCATCAAAGCCATAACTTTGAATTATACCCTACGATTAAGTTTGATGAAACGATTTACTAT
GTTGCTTGGCATCCGTCTAAGCTAATTTTGGCAATTCTGCTCACTGATGAGATTCAGTTGTGGCAGTTTCCTGAGTAA

Upstream 100 bases:

>100_bases
GTTGTACCAAGGGAGTTTTTTTATCCACCAGCAAATCATGCAACATTTTGGAGCAACGTCTTGTATGATCTGTGTAACGA
TAGCTTGAGTAGGAGAGAAT

Downstream 100 bases:

>100_bases
CCACGAGAGGAATTGATAATGCAAACCCGAATTCGTTGGCATACTGTGCTGAGCATTGGCATGTTGCTAGCCGTGCTTGC
TAGTGCCGCTGGCTACTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MPILTNLKPRWHTALSIGMLLAVLASAAGYFYWASRPFTLEQLAPVDTPTLVHTIKADPRKPFDRIVQWNSRGDRLAVSS
DKNNILIYSSAGELVADFRSHLFMGLGINELEWHPTKDILAVAYDERLVLWSADGTIIKQINSDITFAFWDIDWNQQTEQ
LAVNQYYAFDRKYYHQIALFDDTGALIKQISQSINFTRDIKWLDENQIVIHTANDEILVLDTEKEILSSLIAGKYAEMDV
DQQHHTIAAVPTSLKAITLWKNNQLTELPVDRIAGDVLAINPASNHTIIYQPTSELRMLNHQSHNFELYPTIKFDETIYY
VAWHPSKLILAILLTDEIQLWQFPE

Sequences:

>Translated_345_residues
MPILTNLKPRWHTALSIGMLLAVLASAAGYFYWASRPFTLEQLAPVDTPTLVHTIKADPRKPFDRIVQWNSRGDRLAVSS
DKNNILIYSSAGELVADFRSHLFMGLGINELEWHPTKDILAVAYDERLVLWSADGTIIKQINSDITFAFWDIDWNQQTEQ
LAVNQYYAFDRKYYHQIALFDDTGALIKQISQSINFTRDIKWLDENQIVIHTANDEILVLDTEKEILSSLIAGKYAEMDV
DQQHHTIAAVPTSLKAITLWKNNQLTELPVDRIAGDVLAINPASNHTIIYQPTSELRMLNHQSHNFELYPTIKFDETIYY
VAWHPSKLILAILLTDEIQLWQFPE
>Mature_344_residues
PILTNLKPRWHTALSIGMLLAVLASAAGYFYWASRPFTLEQLAPVDTPTLVHTIKADPRKPFDRIVQWNSRGDRLAVSSD
KNNILIYSSAGELVADFRSHLFMGLGINELEWHPTKDILAVAYDERLVLWSADGTIIKQINSDITFAFWDIDWNQQTEQL
AVNQYYAFDRKYYHQIALFDDTGALIKQISQSINFTRDIKWLDENQIVIHTANDEILVLDTEKEILSSLIAGKYAEMDVD
QQHHTIAAVPTSLKAITLWKNNQLTELPVDRIAGDVLAINPASNHTIIYQPTSELRMLNHQSHNFELYPTIKFDETIYYV
AWHPSKLILAILLTDEIQLWQFPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39591; Mature: 39460

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPILTNLKPRWHTALSIGMLLAVLASAAGYFYWASRPFTLEQLAPVDTPTLVHTIKADPR
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCEEHHHCCCCCCCCEEEEECCCCC
KPFDRIVQWNSRGDRLAVSSDKNNILIYSSAGELVADFRSHLFMGLGINELEWHPTKDIL
CCHHHHEEECCCCCEEEEECCCCCEEEEECCCHHHHHHHHHEEECCCCCCCCCCCCCCEE
AVAYDERLVLWSADGTIIKQINSDITFAFWDIDWNQQTEQLAVNQYYAFDRKYYHQIALF
EEEECCEEEEEECCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEE
DDTGALIKQISQSINFTRDIKWLDENQIVIHTANDEILVLDTEKEILSSLIAGKYAEMDV
CCCHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCEEEEECHHHHHHHHHCCCCCCCCC
DQQHHTIAAVPTSLKAITLWKNNQLTELPVDRIAGDVLAINPASNHTIIYQPTSELRMLN
CCCCCEEEECCCCEEEEEEECCCCEEECCHHHHCCCEEEECCCCCCEEEECCHHHHHHHC
HQSHNFELYPTIKFDETIYYVAWHPSKLILAILLTDEIQLWQFPE
CCCCCEEEEEEEEECCEEEEEEECCCCEEEEEEEECCEEEEECCC
>Mature Secondary Structure 
PILTNLKPRWHTALSIGMLLAVLASAAGYFYWASRPFTLEQLAPVDTPTLVHTIKADPR
CCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCEEHHHCCCCCCCCEEEEECCCCC
KPFDRIVQWNSRGDRLAVSSDKNNILIYSSAGELVADFRSHLFMGLGINELEWHPTKDIL
CCHHHHEEECCCCCEEEEECCCCCEEEEECCCHHHHHHHHHEEECCCCCCCCCCCCCCEE
AVAYDERLVLWSADGTIIKQINSDITFAFWDIDWNQQTEQLAVNQYYAFDRKYYHQIALF
EEEECCEEEEEECCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEEE
DDTGALIKQISQSINFTRDIKWLDENQIVIHTANDEILVLDTEKEILSSLIAGKYAEMDV
CCCHHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCEEEEECHHHHHHHHHCCCCCCCCC
DQQHHTIAAVPTSLKAITLWKNNQLTELPVDRIAGDVLAINPASNHTIIYQPTSELRMLN
CCCCCEEEECCCCEEEEEEECCCCEEECCHHHHCCCEEEECCCCCCEEEECCHHHHHHHC
HQSHNFELYPTIKFDETIYYVAWHPSKLILAILLTDEIQLWQFPE
CCCCCEEEEEEEEECCEEEEEEECCCCEEEEEEEECCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA