| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900183
Identifier: 159900183
GI number: 159900183
Start: 4609313
End: 4609906
Strand: Reverse
Name: 159900183
Synonym: Haur_3666
Alternate gene names: NA
Gene position: 4609906-4609313 (Counterclockwise)
Preceding gene: 159900185
Following gene: 159900175
Centisome position: 72.64
GC content: 46.13
Gene sequence:
>594_bases TTGGCGATGCGGTTTTGTCATTATACCATAGAAAATCATATCGACCGGATCGAGCCAACGTTTGGGTACTATGAAATGGC CATGCTGAGCCGATTGAAGCCAACCAACTACTTAATAGGTGCGTATTCCATGGCGAATTCTGATGTTGAGGAAATCGCCA TGCAATGCCCGCGTTGTCAGCAAAAAGTTGCGCTGCATATTAATCAATGCCCCAACTGTAAACGAATGCTCAAACCCCTG ATTATGCGCCAACACATCGCGTTATCCACGCAGCAACGCCAAGGATTGCGACAAAATATTGTTACCTTATTGGTTGCACT CCTATTTCTCATAGGTATTGTTGTTACGTTCCATGTTGCACTTAAGCAGGTTTCAGGCTTGATTTGGCCCATAATCGGAC TCATGATCGCTGTAGTGGGCTTTTATCTCGTGCGATTGCTGCGCGATTGGATCAGTGGTCAGGTGCTGGTGCAAATTGAT CAATTGCAAGCATTACAAGAGGTTCGTAGGCGTGGTGGCAGGCGGTTTTATGGCGATTTTAGGGCAATTGGTAGCCAACA ATTGCAGCAAACGTCACTACGAACGTGCAATTGA
Upstream 100 bases:
>100_bases ATTGGCATATCGGTCTGTGTTCTCCACCATGCCCCAAATTGCTAGGGCGTGGTTCTAATCAAGAGTCATTACAGTAGGCG CAAATGGCTATGACCCCATC
Downstream 100 bases:
>100_bases AGGTAATTATTATGTTGTAAACTATAGCCAGCGTAGCAACATCGTCTGGGAATTGGCGCTAGTTACCCGTAAAATTGCTT AGCTCAGGCTACTGTCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MAMRFCHYTIENHIDRIEPTFGYYEMAMLSRLKPTNYLIGAYSMANSDVEEIAMQCPRCQQKVALHINQCPNCKRMLKPL IMRQHIALSTQQRQGLRQNIVTLLVALLFLIGIVVTFHVALKQVSGLIWPIIGLMIAVVGFYLVRLLRDWISGQVLVQID QLQALQEVRRRGGRRFYGDFRAIGSQQLQQTSLRTCN
Sequences:
>Translated_197_residues MAMRFCHYTIENHIDRIEPTFGYYEMAMLSRLKPTNYLIGAYSMANSDVEEIAMQCPRCQQKVALHINQCPNCKRMLKPL IMRQHIALSTQQRQGLRQNIVTLLVALLFLIGIVVTFHVALKQVSGLIWPIIGLMIAVVGFYLVRLLRDWISGQVLVQID QLQALQEVRRRGGRRFYGDFRAIGSQQLQQTSLRTCN >Mature_196_residues AMRFCHYTIENHIDRIEPTFGYYEMAMLSRLKPTNYLIGAYSMANSDVEEIAMQCPRCQQKVALHINQCPNCKRMLKPLI MRQHIALSTQQRQGLRQNIVTLLVALLFLIGIVVTFHVALKQVSGLIWPIIGLMIAVVGFYLVRLLRDWISGQVLVQIDQ LQALQEVRRRGGRRFYGDFRAIGSQQLQQTSLRTCN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22694; Mature: 22563
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMRFCHYTIENHIDRIEPTFGYYEMAMLSRLKPTNYLIGAYSMANSDVEEIAMQCPRCQ CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCHHHH QKVALHINQCPNCKRMLKPLIMRQHIALSTQQRQGLRQNIVTLLVALLFLIGIVVTFHVA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKQVSGLIWPIIGLMIAVVGFYLVRLLRDWISGQVLVQIDQLQALQEVRRRGGRRFYGDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHCCCCHHHHH RAIGSQQLQQTSLRTCN HHHHHHHHHHHHHCCCC >Mature Secondary Structure AMRFCHYTIENHIDRIEPTFGYYEMAMLSRLKPTNYLIGAYSMANSDVEEIAMQCPRCQ CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCHHHH QKVALHINQCPNCKRMLKPLIMRQHIALSTQQRQGLRQNIVTLLVALLFLIGIVVTFHVA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKQVSGLIWPIIGLMIAVVGFYLVRLLRDWISGQVLVQIDQLQALQEVRRRGGRRFYGDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHCCCCHHHHH RAIGSQQLQQTSLRTCN HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA