Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900183

Identifier: 159900183

GI number: 159900183

Start: 4609313

End: 4609906

Strand: Reverse

Name: 159900183

Synonym: Haur_3666

Alternate gene names: NA

Gene position: 4609906-4609313 (Counterclockwise)

Preceding gene: 159900185

Following gene: 159900175

Centisome position: 72.64

GC content: 46.13

Gene sequence:

>594_bases
TTGGCGATGCGGTTTTGTCATTATACCATAGAAAATCATATCGACCGGATCGAGCCAACGTTTGGGTACTATGAAATGGC
CATGCTGAGCCGATTGAAGCCAACCAACTACTTAATAGGTGCGTATTCCATGGCGAATTCTGATGTTGAGGAAATCGCCA
TGCAATGCCCGCGTTGTCAGCAAAAAGTTGCGCTGCATATTAATCAATGCCCCAACTGTAAACGAATGCTCAAACCCCTG
ATTATGCGCCAACACATCGCGTTATCCACGCAGCAACGCCAAGGATTGCGACAAAATATTGTTACCTTATTGGTTGCACT
CCTATTTCTCATAGGTATTGTTGTTACGTTCCATGTTGCACTTAAGCAGGTTTCAGGCTTGATTTGGCCCATAATCGGAC
TCATGATCGCTGTAGTGGGCTTTTATCTCGTGCGATTGCTGCGCGATTGGATCAGTGGTCAGGTGCTGGTGCAAATTGAT
CAATTGCAAGCATTACAAGAGGTTCGTAGGCGTGGTGGCAGGCGGTTTTATGGCGATTTTAGGGCAATTGGTAGCCAACA
ATTGCAGCAAACGTCACTACGAACGTGCAATTGA

Upstream 100 bases:

>100_bases
ATTGGCATATCGGTCTGTGTTCTCCACCATGCCCCAAATTGCTAGGGCGTGGTTCTAATCAAGAGTCATTACAGTAGGCG
CAAATGGCTATGACCCCATC

Downstream 100 bases:

>100_bases
AGGTAATTATTATGTTGTAAACTATAGCCAGCGTAGCAACATCGTCTGGGAATTGGCGCTAGTTACCCGTAAAATTGCTT
AGCTCAGGCTACTGTCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MAMRFCHYTIENHIDRIEPTFGYYEMAMLSRLKPTNYLIGAYSMANSDVEEIAMQCPRCQQKVALHINQCPNCKRMLKPL
IMRQHIALSTQQRQGLRQNIVTLLVALLFLIGIVVTFHVALKQVSGLIWPIIGLMIAVVGFYLVRLLRDWISGQVLVQID
QLQALQEVRRRGGRRFYGDFRAIGSQQLQQTSLRTCN

Sequences:

>Translated_197_residues
MAMRFCHYTIENHIDRIEPTFGYYEMAMLSRLKPTNYLIGAYSMANSDVEEIAMQCPRCQQKVALHINQCPNCKRMLKPL
IMRQHIALSTQQRQGLRQNIVTLLVALLFLIGIVVTFHVALKQVSGLIWPIIGLMIAVVGFYLVRLLRDWISGQVLVQID
QLQALQEVRRRGGRRFYGDFRAIGSQQLQQTSLRTCN
>Mature_196_residues
AMRFCHYTIENHIDRIEPTFGYYEMAMLSRLKPTNYLIGAYSMANSDVEEIAMQCPRCQQKVALHINQCPNCKRMLKPLI
MRQHIALSTQQRQGLRQNIVTLLVALLFLIGIVVTFHVALKQVSGLIWPIIGLMIAVVGFYLVRLLRDWISGQVLVQIDQ
LQALQEVRRRGGRRFYGDFRAIGSQQLQQTSLRTCN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22694; Mature: 22563

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMRFCHYTIENHIDRIEPTFGYYEMAMLSRLKPTNYLIGAYSMANSDVEEIAMQCPRCQ
CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCHHHH
QKVALHINQCPNCKRMLKPLIMRQHIALSTQQRQGLRQNIVTLLVALLFLIGIVVTFHVA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKQVSGLIWPIIGLMIAVVGFYLVRLLRDWISGQVLVQIDQLQALQEVRRRGGRRFYGDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHCCCCHHHHH
RAIGSQQLQQTSLRTCN
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AMRFCHYTIENHIDRIEPTFGYYEMAMLSRLKPTNYLIGAYSMANSDVEEIAMQCPRCQ
CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHCHHHH
QKVALHINQCPNCKRMLKPLIMRQHIALSTQQRQGLRQNIVTLLVALLFLIGIVVTFHVA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKQVSGLIWPIIGLMIAVVGFYLVRLLRDWISGQVLVQIDQLQALQEVRRRGGRRFYGDF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHCCCCHHHHH
RAIGSQQLQQTSLRTCN
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA