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The map label for this gene is sbpA [H]

Identifier: 159900176

GI number: 159900176

Start: 4599898

End: 4601037

Strand: Direct

Name: sbpA [H]

Synonym: Haur_3659

Alternate gene names: 159900176

Gene position: 4599898-4601037 (Clockwise)

Preceding gene: 159900171

Following gene: 159900177

Centisome position: 72.48

GC content: 48.42

Gene sequence:

>1140_bases
ATGACGATGAAGTCTCCTCGCGCGAAGTTCATGATGGTTTTGATGTTGCTCATGACAATGGTTTTGGCCAGCTGTGGCGA
AGCCGCAACTCCAACCACTGCGCCAACCGATGGCGGCACTGGTGGCACAACCGCCAGCAGCGATAACAGCAAATTCACCA
TTGGGATCTCAATGCCCACCAAATCATCAGCCCGCTGGATTGCCGACGGCGATAATATGGTGAAATATTTCCAAGAAAAA
GGCTTCAAAACCGACCTTCAATACGCTGAAGACGATATCCCAACCCAACTTTCACAAATTGAAAACATGGTCACCAAAGG
GGTCAATGTTTTGGTGATTGCGGCAATCGATGGCGAAACCCTCTCAGATGTTCTGCAAAGTGCTAAAGACAAGAAAATTC
TGGTTATCGCCTACGACCGCTTGATCAAGAAAACCCCCAACGTTGACTACTACGCCACCTTCGATAACTTCCAAGTTGGG
GTCTTGCAAGCCCAATCAATCGAAACCAAACTTGGTTTGAAAGAAGGCAAAGGCCCATTCAATATCGAGTTGTTCGGTGG
CTCATCCGACGATAACAACGCCTTCTTCTTCTACAATGGCGCTATGTCGGTCTTGCAACCTTACATCGATAGCGGCAAGT
TGGTGGTTGGTAGCGGCCAAACTGGTATGGATAAAGTTGCCACCCTGCGCTGGGACGGTGCTACCGCCCAATCACGCATG
GACAACATTTTGAGCGCCTTCTACGGCGACAAACGGGTTGATGCAGTGCTTTCACCATACGATGGTATCAGCATCGGGAT
CATCTCATCGCTCAAGGGTGTTGGCTACGGTAGCGCCGACAAACCAATGCCAGTCGTTTCAGGCCAAGATGCTGAAGTGC
CCTCAGTCAAGTCAATTATCGCTGGCGAACAAAGCTCAACCATCTTCAAAGATACCCGCGAGCTTGCTAAATCAGTGGTA
GGTATGGTCGAAGCATCATTGTCAGGCAAAGAAGTTGCCGTCAACGATACCAAAACCTATGACAATGGGGTCAAAGTTGT
TCCTTCACAATTGCTGGTTCCGGTGGTCGTCGATGTAACCAACTGGGAAAAAGTATTGATCGACAGTGGTTACTACAAAA
AAGAAGACATAACCAAATAA

Upstream 100 bases:

>100_bases
GTTCGCAACTTGTGTTCGTTGGGTGTGCAATTAAGCTCATCAACAGCATTTGTGGCAAAACCCAAGCCACCGCCCACGAA
AACTTACTCCAAGGAAGGAC

Downstream 100 bases:

>100_bases
TTCTGGCAGCAAGGTCTGTGTATGGGCAAGGCTCATGCACAGACCTGCTTGCATATGAACAACTTGGCCATCTTCTCAGC
AAACGAGGCACAGGTTATGT

Product: multiple sugar-binding periplasmic receptor ChvE

Products: ADP; phosphate; xylose [Cytoplasm] [C]

Alternate protein names: Sugar-binding protein A [H]

Number of amino acids: Translated: 379; Mature: 378

Protein sequence:

>379_residues
MTMKSPRAKFMMVLMLLMTMVLASCGEAATPTTAPTDGGTGGTTASSDNSKFTIGISMPTKSSARWIADGDNMVKYFQEK
GFKTDLQYAEDDIPTQLSQIENMVTKGVNVLVIAAIDGETLSDVLQSAKDKKILVIAYDRLIKKTPNVDYYATFDNFQVG
VLQAQSIETKLGLKEGKGPFNIELFGGSSDDNNAFFFYNGAMSVLQPYIDSGKLVVGSGQTGMDKVATLRWDGATAQSRM
DNILSAFYGDKRVDAVLSPYDGISIGIISSLKGVGYGSADKPMPVVSGQDAEVPSVKSIIAGEQSSTIFKDTRELAKSVV
GMVEASLSGKEVAVNDTKTYDNGVKVVPSQLLVPVVVDVTNWEKVLIDSGYYKKEDITK

Sequences:

>Translated_379_residues
MTMKSPRAKFMMVLMLLMTMVLASCGEAATPTTAPTDGGTGGTTASSDNSKFTIGISMPTKSSARWIADGDNMVKYFQEK
GFKTDLQYAEDDIPTQLSQIENMVTKGVNVLVIAAIDGETLSDVLQSAKDKKILVIAYDRLIKKTPNVDYYATFDNFQVG
VLQAQSIETKLGLKEGKGPFNIELFGGSSDDNNAFFFYNGAMSVLQPYIDSGKLVVGSGQTGMDKVATLRWDGATAQSRM
DNILSAFYGDKRVDAVLSPYDGISIGIISSLKGVGYGSADKPMPVVSGQDAEVPSVKSIIAGEQSSTIFKDTRELAKSVV
GMVEASLSGKEVAVNDTKTYDNGVKVVPSQLLVPVVVDVTNWEKVLIDSGYYKKEDITK
>Mature_378_residues
TMKSPRAKFMMVLMLLMTMVLASCGEAATPTTAPTDGGTGGTTASSDNSKFTIGISMPTKSSARWIADGDNMVKYFQEKG
FKTDLQYAEDDIPTQLSQIENMVTKGVNVLVIAAIDGETLSDVLQSAKDKKILVIAYDRLIKKTPNVDYYATFDNFQVGV
LQAQSIETKLGLKEGKGPFNIELFGGSSDDNNAFFFYNGAMSVLQPYIDSGKLVVGSGQTGMDKVATLRWDGATAQSRMD
NILSAFYGDKRVDAVLSPYDGISIGIISSLKGVGYGSADKPMPVVSGQDAEVPSVKSIIAGEQSSTIFKDTRELAKSVVG
MVEASLSGKEVAVNDTKTYDNGVKVVPSQLLVPVVVDVTNWEKVLIDSGYYKKEDITK

Specific function: Mediates chemotaxis towards D-galactose, L-arabinose and D-fucose but not towards D-fructose. Probably part of a binding- protein high affinity uptake system [H]

COG id: COG4213

COG function: function code G; ABC-type xylose transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1789990, Length=324, Percent_Identity=37.037037037037, Blast_Score=172, Evalue=3e-44,

Paralogues:

None

Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40723; Mature: 40592

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMKSPRAKFMMVLMLLMTMVLASCGEAATPTTAPTDGGTGGTTASSDNSKFTIGISMPT
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC
KSSARWIADGDNMVKYFQEKGFKTDLQYAEDDIPTQLSQIENMVTKGVNVLVIAAIDGET
CCCCEEEECCHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCHH
LSDVLQSAKDKKILVIAYDRLIKKTPNVDYYATFDNFQVGVLQAQSIETKLGLKEGKGPF
HHHHHHCCCCCEEEEEEEHHHHHCCCCCCEEEECCCEEEEEEEHHHHHHHCCCCCCCCCE
NIELFGGSSDDNNAFFFYNGAMSVLQPYIDSGKLVVGSGQTGMDKVATLRWDGATAQSRM
EEEEEECCCCCCCEEEEECCHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCHHHHH
DNILSAFYGDKRVDAVLSPYDGISIGIISSLKGVGYGSADKPMPVVSGQDAEVPSVKSII
HHHHHHHHCCHHHHHHCCCCCCCEEHHHHHHCCCCCCCCCCCCCEECCCCCCCCHHHHHH
AGEQSSTIFKDTRELAKSVVGMVEASLSGKEVAVNDTKTYDNGVKVVPSQLLVPVVVDVT
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEECCCCCEEEEEEECC
NWEKVLIDSGYYKKEDITK
CCCEEEECCCCCCCCCCCC
>Mature Secondary Structure 
TMKSPRAKFMMVLMLLMTMVLASCGEAATPTTAPTDGGTGGTTASSDNSKFTIGISMPT
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC
KSSARWIADGDNMVKYFQEKGFKTDLQYAEDDIPTQLSQIENMVTKGVNVLVIAAIDGET
CCCCEEEECCHHHHHHHHHCCCCCCHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEECCHH
LSDVLQSAKDKKILVIAYDRLIKKTPNVDYYATFDNFQVGVLQAQSIETKLGLKEGKGPF
HHHHHHCCCCCEEEEEEEHHHHHCCCCCCEEEECCCEEEEEEEHHHHHHHCCCCCCCCCE
NIELFGGSSDDNNAFFFYNGAMSVLQPYIDSGKLVVGSGQTGMDKVATLRWDGATAQSRM
EEEEEECCCCCCCEEEEECCHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCCCHHHHH
DNILSAFYGDKRVDAVLSPYDGISIGIISSLKGVGYGSADKPMPVVSGQDAEVPSVKSII
HHHHHHHHCCHHHHHHCCCCCCCEEHHHHHHCCCCCCCCCCCCCEECCCCCCCCHHHHHH
AGEQSSTIFKDTRELAKSVVGMVEASLSGKEVAVNDTKTYDNGVKVVPSQLLVPVVVDVT
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEECCCCCEEEEEEECC
NWEKVLIDSGYYKKEDITK
CCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; xylose [Periplasm]; H2O [C]

Specific reaction: ATP + xylose [Periplasm] + H2O = ADP + phosphate + xylose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10361275 [H]