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The map label for this gene is 159900129

Identifier: 159900129

GI number: 159900129

Start: 4540337

End: 4541644

Strand: Direct

Name: 159900129

Synonym: Haur_3612

Alternate gene names: NA

Gene position: 4540337-4541644 (Clockwise)

Preceding gene: 159900127

Following gene: 159900130

Centisome position: 71.54

GC content: 50.15

Gene sequence:

>1308_bases
GTGGCCGTTCAAGTTTGGATTGGCGAAAAGCCCGAACACCCCAATGAGCGCAAAGCAATTATTGCCTTAGCCAACGGTCT
CGACCGCTTGGAAGGCCTTTATGTCATGCTGGCAAATTTTAGCGTCGGTGGCCATACCATTGACCTTGTGGTGTTGAAGA
ACGATGCAGTTTTTATTCTCGAAATGAAGCACTGCGATGGCAAGGTTTATGGTTCGGTCAATGGACGCTGGAAGGTCGTC
AGTAGCGCTGGTTCGGTCAAATGGCTCAATCAAGGCCGCAAAAACCCCTATAACCAAGTAATTGCCTACTATTACGCCTT
CCGCAATTTCTTGCACGACCATCAGCACGAAATTATGTCGGAGCAAAAGGCCAGTCAAACCGATTTTCGGGCTTGCAAAC
GCCTGATCGTGATCTCGCCTATTTTAGAGCGTGGCTCGGAAATTAATCTCGATTGGCGGGTCAATGTTAAAGGCTTGGAT
GAATTACCAACCCACTTGGTGACTGAGCGCACCGATGAAATTCATTTCACCGATGAGGAAATGCTCAAAATTCCGCGCTT
GCTGAATTGCTCAATCTGGGAAGAAGTCAATCAATTGGTTGCAGGAGTGATGCCTGCATGGGATGATACACCCTCTGATC
CGCCGCCAGCCGCGCCACCACCCGAACCGATTGCTTTGCCAGAGCCGGTGATCGAGCCAGCTTTGCCAAAAACGTGGCCC
GAACGCCTGCGCGATAGCTCGTTACGCACCCGTTTCAATGTTTTAGGCTGGGCGGTTGTCTCAGTTTTGTTGATATTGGT
GTTAGTTCAGGGTCGCAATATTACGATTATCTCGAATGCCCCAACGCCCGAGGTTTATGGCACAATTCCAGTTCCAGCAG
CCTCGCCAACCCCAAGTGGTTGTATTACGACGTTTGGGCAAACCATTCGCAAGGCCCGCGACCCAATTTCCTATCAATGG
TATACGATCGATAGTCGGGCCAGCGAAACGGCCTATGTAGCAGTAACGCTTGATCGGGTACAATTTTGCTCCGACCAAAT
TGTGCTGCACTGGAGCGTCCAAAACACAACAGCTGGCATTGTTCAATTAGGTTTGACGAATAACAATATTGCGGTGAGCG
ACACCAGTGGCATTATCTATCGCCTACGTGAAGAACGCCAAACCATTCGCGTGCGCAACGGCAAAATTAGCAGTGGCACT
GCAACCATTCCACGCTCGGTCAATTTGAGCGCCAATACCCTAACGATTGAGTTGCTCAACGAGCCATTTGGCGGCCAGTT
GTGGACCGTGCAAGTGCCCAAGAAATAA

Upstream 100 bases:

>100_bases
TGCTTTTTCAACTATTTTTAACAATTCGTCAATGCACGGAGCAACGAAACAATGATAATATAAGCACAGAATTGGCTTTT
TTTTGGCTAGGGAGCTACCC

Downstream 100 bases:

>100_bases
AGAACATAGAACATATATTCAGGGGCTAGGAGTGGGGGTGAGAGATCTTAAAACCTAGATGCTACCCTTCATGATCTTCG
TGTGCTTTGCGGTTGCACCT

Product: NERD domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MAVQVWIGEKPEHPNERKAIIALANGLDRLEGLYVMLANFSVGGHTIDLVVLKNDAVFILEMKHCDGKVYGSVNGRWKVV
SSAGSVKWLNQGRKNPYNQVIAYYYAFRNFLHDHQHEIMSEQKASQTDFRACKRLIVISPILERGSEINLDWRVNVKGLD
ELPTHLVTERTDEIHFTDEEMLKIPRLLNCSIWEEVNQLVAGVMPAWDDTPSDPPPAAPPPEPIALPEPVIEPALPKTWP
ERLRDSSLRTRFNVLGWAVVSVLLILVLVQGRNITIISNAPTPEVYGTIPVPAASPTPSGCITTFGQTIRKARDPISYQW
YTIDSRASETAYVAVTLDRVQFCSDQIVLHWSVQNTTAGIVQLGLTNNNIAVSDTSGIIYRLREERQTIRVRNGKISSGT
ATIPRSVNLSANTLTIELLNEPFGGQLWTVQVPKK

Sequences:

>Translated_435_residues
MAVQVWIGEKPEHPNERKAIIALANGLDRLEGLYVMLANFSVGGHTIDLVVLKNDAVFILEMKHCDGKVYGSVNGRWKVV
SSAGSVKWLNQGRKNPYNQVIAYYYAFRNFLHDHQHEIMSEQKASQTDFRACKRLIVISPILERGSEINLDWRVNVKGLD
ELPTHLVTERTDEIHFTDEEMLKIPRLLNCSIWEEVNQLVAGVMPAWDDTPSDPPPAAPPPEPIALPEPVIEPALPKTWP
ERLRDSSLRTRFNVLGWAVVSVLLILVLVQGRNITIISNAPTPEVYGTIPVPAASPTPSGCITTFGQTIRKARDPISYQW
YTIDSRASETAYVAVTLDRVQFCSDQIVLHWSVQNTTAGIVQLGLTNNNIAVSDTSGIIYRLREERQTIRVRNGKISSGT
ATIPRSVNLSANTLTIELLNEPFGGQLWTVQVPKK
>Mature_434_residues
AVQVWIGEKPEHPNERKAIIALANGLDRLEGLYVMLANFSVGGHTIDLVVLKNDAVFILEMKHCDGKVYGSVNGRWKVVS
SAGSVKWLNQGRKNPYNQVIAYYYAFRNFLHDHQHEIMSEQKASQTDFRACKRLIVISPILERGSEINLDWRVNVKGLDE
LPTHLVTERTDEIHFTDEEMLKIPRLLNCSIWEEVNQLVAGVMPAWDDTPSDPPPAAPPPEPIALPEPVIEPALPKTWPE
RLRDSSLRTRFNVLGWAVVSVLLILVLVQGRNITIISNAPTPEVYGTIPVPAASPTPSGCITTFGQTIRKARDPISYQWY
TIDSRASETAYVAVTLDRVQFCSDQIVLHWSVQNTTAGIVQLGLTNNNIAVSDTSGIIYRLREERQTIRVRNGKISSGTA
TIPRSVNLSANTLTIELLNEPFGGQLWTVQVPKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48568; Mature: 48437

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVQVWIGEKPEHPNERKAIIALANGLDRLEGLYVMLANFSVGGHTIDLVVLKNDAVFIL
CEEEEEECCCCCCCCCCEEEEEECCCHHHHCCEEEEEEECCCCCEEEEEEEEECCCEEEE
EMKHCDGKVYGSVNGRWKVVSSAGSVKWLNQGRKNPYNQVIAYYYAFRNFLHDHQHEIMS
EEECCCCEEEECCCCEEEEEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EQKASQTDFRACKRLIVISPILERGSEINLDWRVNVKGLDELPTHLVTERTDEIHFTDEE
HHHCCHHHHHHHHHHHEEEHHHHCCCEECEEEEEECCCCHHHHHHHHHCCCCCEEECHHH
MLKIPRLLNCSIWEEVNQLVAGVMPAWDDTPSDPPPAAPPPEPIALPEPVIEPALPKTWP
HHHCCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
ERLRDSSLRTRFNVLGWAVVSVLLILVLVQGRNITIISNAPTPEVYGTIPVPAASPTPSG
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCCCCCH
CITTFGQTIRKARDPISYQWYTIDSRASETAYVAVTLDRVQFCSDQIVLHWSVQNTTAGI
HHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEEEEHHHHCCCCEEEEEEECCCCEEE
VQLGLTNNNIAVSDTSGIIYRLREERQTIRVRNGKISSGTATIPRSVNLSANTLTIELLN
EEEEECCCCEEEECCCCEEEEEHHHCCEEEEECCEECCCCEECCCEECCCCCEEEEEEEC
EPFGGQLWTVQVPKK
CCCCCEEEEEECCCC
>Mature Secondary Structure 
AVQVWIGEKPEHPNERKAIIALANGLDRLEGLYVMLANFSVGGHTIDLVVLKNDAVFIL
EEEEEECCCCCCCCCCEEEEEECCCHHHHCCEEEEEEECCCCCEEEEEEEEECCCEEEE
EMKHCDGKVYGSVNGRWKVVSSAGSVKWLNQGRKNPYNQVIAYYYAFRNFLHDHQHEIMS
EEECCCCEEEECCCCEEEEEECCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EQKASQTDFRACKRLIVISPILERGSEINLDWRVNVKGLDELPTHLVTERTDEIHFTDEE
HHHCCHHHHHHHHHHHEEEHHHHCCCEECEEEEEECCCCHHHHHHHHHCCCCCEEECHHH
MLKIPRLLNCSIWEEVNQLVAGVMPAWDDTPSDPPPAAPPPEPIALPEPVIEPALPKTWP
HHHCCHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
ERLRDSSLRTRFNVLGWAVVSVLLILVLVQGRNITIISNAPTPEVYGTIPVPAASPTPSG
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCCCCCH
CITTFGQTIRKARDPISYQWYTIDSRASETAYVAVTLDRVQFCSDQIVLHWSVQNTTAGI
HHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEEEEHHHHCCCCEEEEEEECCCCEEE
VQLGLTNNNIAVSDTSGIIYRLREERQTIRVRNGKISSGTATIPRSVNLSANTLTIELLN
EEEEECCCCEEEECCCCEEEEEHHHCCEEEEECCEECCCCEECCCEECCCCCEEEEEEEC
EPFGGQLWTVQVPKK
CCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA