Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900106

Identifier: 159900106

GI number: 159900106

Start: 4517718

End: 4518659

Strand: Reverse

Name: 159900106

Synonym: Haur_3589

Alternate gene names: NA

Gene position: 4518659-4517718 (Counterclockwise)

Preceding gene: 159900107

Following gene: 159900104

Centisome position: 71.2

GC content: 51.17

Gene sequence:

>942_bases
ATGTGGCTTGCAATTGTTTTGACGGTATTGCCAACGCTGCTGTACGTGACCTTTTTGTGGTGGCTTGATCGCTATGAAAA
AGAACCATGGCCGCTGCTGTTAGCAGTGTTTGTATGGGGTGCGGTGCCTGCCGTGGCCCTCGCGTTGTTGGCTGAATTGC
CCAATACTGCTTCAACTTTAGGTTTTGACCGTGGCAGCCAACCAGTTTGGTATGCTCCGTTGGTCGAAGAACCACTCAAA
GCCTTGGCATTGTTTGGCATTTATATGTTCTTTCGCTATGAGTTCGATGGCGTGCTCGATGGCATTATTTATGGCGCACT
GATTGGTTTTGGCTTTGCTATGACCGAAAATGCGATTTATTTTGCTAGTCGTGGCGGCTCGATTACTTCATTACTGTGGC
TGCGTGTGGTGCTATTTGGCTTTAATCATGCCTTCTACACCAGCATCATTGGGGTGGCGTTGGGCATGATTCGCTACGAG
CGCCGCCGTTGGGTGGTGGTTGTGATGCAGCCATTGAGCCTGATTTTGGCTGTCGTGTTCCACGCACTGCACAATATGAC
GATTAGCTATCGCTTTCCTGGTGTATTGATCGCATGGTTGATCAGCAGCGGCGGCGTGTTAATTGTGGTGTTGGTGGCAA
TCATCGCCTGGCGTAAAGAGCGCTATTGGATCGATCTAGAATTGGTTGAGGAAATTCGCTGTGGATTTATCGACCAAGCG
ACCTACCAAACCGTGCGGTCAACCCGCCGTCGGGTGCAAAGCCAATGGGAAGCGCTCTTTCGCGGCGGCTGGCGAGCAGT
GCAAACGGTGCGTACTCGCCATCATTTACTCACTGAGTTGGCATTCTTGAAATATCAGCTGCGGATCGGCGATGTGCATT
GTCGTCCCGCCGATTTATACCCGCTGCGCCGCCGAATTCTCGAAGTTCACGAAGATTTCTAG

Upstream 100 bases:

>100_bases
CTAAGTATTCCCGAACCCGATTCCCGACCATGGGTGACGGAGTAGGTCATACCGTATTGATGGCCAGGCTGAGCGCCGCA
ATCAATCAACGAGAAAATCA

Downstream 100 bases:

>100_bases
GTTGCCATTAAGGTCAATAAGCCAACCTCGGGCGTTGCCCCAAAGCGAATTGGCAGACCTGCCAAACCCCGACTCACATA
CAACCCACATTGGCCGATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MWLAIVLTVLPTLLYVTFLWWLDRYEKEPWPLLLAVFVWGAVPAVALALLAELPNTASTLGFDRGSQPVWYAPLVEEPLK
ALALFGIYMFFRYEFDGVLDGIIYGALIGFGFAMTENAIYFASRGGSITSLLWLRVVLFGFNHAFYTSIIGVALGMIRYE
RRRWVVVVMQPLSLILAVVFHALHNMTISYRFPGVLIAWLISSGGVLIVVLVAIIAWRKERYWIDLELVEEIRCGFIDQA
TYQTVRSTRRRVQSQWEALFRGGWRAVQTVRTRHHLLTELAFLKYQLRIGDVHCRPADLYPLRRRILEVHEDF

Sequences:

>Translated_313_residues
MWLAIVLTVLPTLLYVTFLWWLDRYEKEPWPLLLAVFVWGAVPAVALALLAELPNTASTLGFDRGSQPVWYAPLVEEPLK
ALALFGIYMFFRYEFDGVLDGIIYGALIGFGFAMTENAIYFASRGGSITSLLWLRVVLFGFNHAFYTSIIGVALGMIRYE
RRRWVVVVMQPLSLILAVVFHALHNMTISYRFPGVLIAWLISSGGVLIVVLVAIIAWRKERYWIDLELVEEIRCGFIDQA
TYQTVRSTRRRVQSQWEALFRGGWRAVQTVRTRHHLLTELAFLKYQLRIGDVHCRPADLYPLRRRILEVHEDF
>Mature_313_residues
MWLAIVLTVLPTLLYVTFLWWLDRYEKEPWPLLLAVFVWGAVPAVALALLAELPNTASTLGFDRGSQPVWYAPLVEEPLK
ALALFGIYMFFRYEFDGVLDGIIYGALIGFGFAMTENAIYFASRGGSITSLLWLRVVLFGFNHAFYTSIIGVALGMIRYE
RRRWVVVVMQPLSLILAVVFHALHNMTISYRFPGVLIAWLISSGGVLIVVLVAIIAWRKERYWIDLELVEEIRCGFIDQA
TYQTVRSTRRRVQSQWEALFRGGWRAVQTVRTRHHLLTELAFLKYQLRIGDVHCRPADLYPLRRRILEVHEDF

Specific function: Unknown

COG id: COG2339

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36129; Mature: 36129

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLAIVLTVLPTLLYVTFLWWLDRYEKEPWPLLLAVFVWGAVPAVALALLAELPNTASTL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC
GFDRGSQPVWYAPLVEEPLKALALFGIYMFFRYEFDGVLDGIIYGALIGFGFAMTENAIY
CCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
FASRGGSITSLLWLRVVLFGFNHAFYTSIIGVALGMIRYERRRWVVVVMQPLSLILAVVF
EEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHH
HALHNMTISYRFPGVLIAWLISSGGVLIVVLVAIIAWRKERYWIDLELVEEIRCGFIDQA
HHHHCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCHH
TYQTVRSTRRRVQSQWEALFRGGWRAVQTVRTRHHLLTELAFLKYQLRIGDVHCRPADLY
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHH
PLRRRILEVHEDF
HHHHHHHHHHCCC
>Mature Secondary Structure
MWLAIVLTVLPTLLYVTFLWWLDRYEKEPWPLLLAVFVWGAVPAVALALLAELPNTASTL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHC
GFDRGSQPVWYAPLVEEPLKALALFGIYMFFRYEFDGVLDGIIYGALIGFGFAMTENAIY
CCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
FASRGGSITSLLWLRVVLFGFNHAFYTSIIGVALGMIRYERRRWVVVVMQPLSLILAVVF
EEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHH
HALHNMTISYRFPGVLIAWLISSGGVLIVVLVAIIAWRKERYWIDLELVEEIRCGFIDQA
HHHHCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHCCCCCHH
TYQTVRSTRRRVQSQWEALFRGGWRAVQTVRTRHHLLTELAFLKYQLRIGDVHCRPADLY
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCHH
PLRRRILEVHEDF
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA