| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is aprX [H]
Identifier: 159900104
GI number: 159900104
Start: 4514514
End: 4516313
Strand: Reverse
Name: aprX [H]
Synonym: Haur_3587
Alternate gene names: 159900104
Gene position: 4516313-4514514 (Counterclockwise)
Preceding gene: 159900106
Following gene: 159900089
Centisome position: 71.16
GC content: 53.44
Gene sequence:
>1800_bases ATGGATAGAGAACATCGCAGAGGATTTTTTCGCAGTTTATTGCTGGCAAGCCTCTTTTTGAGTGCGATTGGCCTTGCACA GCCTGTTGCAACCACCCAACCGCAATCAATGTTAGTGCAAGGTGCTGCGCTAAGCAACCAAGCTAGGGCAATTCAAGCAG TTGGCGGCACTGTCGAACGCCAATTTGCCCGCTTTGAAACCAGCGTAGCCCAATTAACCAAACCACAAATTGCTCAACTG CAAGCGCAAGGCTTGCGGGTTTTTGCCGATCAAGCGGTTGCTAGCTCAGCGCAAGGAGCTGTTGATCAGCCAATTGCTGT GCAGGCTGGCCCCAAAAGTAGCAACCCTGCGCCATTGCAATATCCATCGATTGTAACCGGCGCTGATGTGGTGCAACGCC GTGGTATCGATGGACGCGGCGTGACCGTGGCAGTGATCGATTCGGGTTTGCCAGCGATCGAACGACCTGAGCGTTGGCAG CGCATCGATAACACGACTGCTCGCTACAACCAAGGCAGCCGTTTTTTGATTTATAAAGACATGTTGGCAAGCAACCAAAT TACGAATAGCAGCGACCCCTACGGCCATGGAACGCATGTATTTGCCACTTTAGCCGATAATCGCGCTTTGCCAGCAGGCT ATAGCGGAGCCAAAGTCGGGATTGCCCCAGGCGCGAATTATGTGGTCGTTCGGGCCTTAAATTCGCAAGGCCAAGCCTCG TATAGCACGATTATTGCGGCGATTGATTGGGTGATTGAGCATGCTGACGAGTACGATATTCGGGTGCTGAATCTCTCGTT GCAAGCCGAAGTGATTGCGCCCTACTGGTATGATCCGCTCAATCAAGCGGTGATGCATGCTTGGAATGAGGGCATCACGG TGGTGGCAGCGGCTGGCAACACTGGCCCAAATCCTGCCACGATTATGGCTCCAGCCAACGTGCCCTATATCATCAGTGTC GGGGCAATTCGGCCTGCAATCTACAACGACAATGGCAGCGATAGTTTAGCAGCCTATTCATCGGCTGGGCCAACCGAAAG TCGTTTTGTTAAGCCCGATGTGGTGATTGCTGGCTCGCGGGTCATTGCACCCCTGCCCGCCGATAGTGTGTTAGCTAATT CTGGGTCCGCAGGTTTGGTTAGCGAACGCGCCAAACTCGAATGGGCTGATTTGAAAACCTCGCAACAGCTTAATTATTAT GCCTTGAGTGGCACATCGATGGCCGCCGCCGAAGTCAGTGGAATTGTCGCCTTGTTGTTGCAAGATGAGCCAAATTTGAC CAATAACCAAATTAAGGCTCGTTTGACTGGCACGGCCCAACTTGCCACTTTGGATGATGGTCAAGCCGCTTACAGCACGT GGCAACAAGGCGCAGGCAAAGTTGTGCCAACTGCGGTGATCGATGGTAGCAACACTGGCGCTGCCAACGCGGGAATGGAT TTGCCGACCGACCTGATTGTGAGCAGCAACCCCGATGATACCAGCAACCATTACCAAGGCTCGACTGAGTATGATGCGGT GACCAACACTTTTACTGATAACACCACGACCTATAGCTCAACCCTTGCGACCAGCTACAGCACCTGGGCGGGGAGCTATA GTACATGGGCTGGCAGTTATCTAACATGGGCTGGTAGTTACAGCACGTGGGCTGGCAGCTACAGCACGTGGGCTGGCAGT TACAGCACGTGGGCTGGCAGTTACAGCACGTGGGCTGGCAGTTATAGCACGTGGGCTGGCAATAACGCTGCTGCGAGTGG AACCACCAATGTCAACGCTGGAAGCCTCGTGAGCGACTAA
Upstream 100 bases:
>100_bases GGACTAATGGCCATACATAACGTCGAATACTGGCATAGCCTATGATATAGCAGCCTCATTCCGCTCGAAACATCGCATGT ATGCCAATTTTGGAGGCGCT
Downstream 100 bases:
>100_bases ATTTCAACCATTTCGAGCGGAGCGTGGGAGCAGCGATGCTTCCACATTTTGGCATCAAAAAAATAGCGCAACAAAACGCT GGGTTGTGGTTACAACTCAG
Product: peptidase S8/S53 subtilisin kexin sedolisin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 599; Mature: 599
Protein sequence:
>599_residues MDREHRRGFFRSLLLASLFLSAIGLAQPVATTQPQSMLVQGAALSNQARAIQAVGGTVERQFARFETSVAQLTKPQIAQL QAQGLRVFADQAVASSAQGAVDQPIAVQAGPKSSNPAPLQYPSIVTGADVVQRRGIDGRGVTVAVIDSGLPAIERPERWQ RIDNTTARYNQGSRFLIYKDMLASNQITNSSDPYGHGTHVFATLADNRALPAGYSGAKVGIAPGANYVVVRALNSQGQAS YSTIIAAIDWVIEHADEYDIRVLNLSLQAEVIAPYWYDPLNQAVMHAWNEGITVVAAAGNTGPNPATIMAPANVPYIISV GAIRPAIYNDNGSDSLAAYSSAGPTESRFVKPDVVIAGSRVIAPLPADSVLANSGSAGLVSERAKLEWADLKTSQQLNYY ALSGTSMAAAEVSGIVALLLQDEPNLTNNQIKARLTGTAQLATLDDGQAAYSTWQQGAGKVVPTAVIDGSNTGAANAGMD LPTDLIVSSNPDDTSNHYQGSTEYDAVTNTFTDNTTTYSSTLATSYSTWAGSYSTWAGSYLTWAGSYSTWAGSYSTWAGS YSTWAGSYSTWAGSYSTWAGNNAAASGTTNVNAGSLVSD
Sequences:
>Translated_599_residues MDREHRRGFFRSLLLASLFLSAIGLAQPVATTQPQSMLVQGAALSNQARAIQAVGGTVERQFARFETSVAQLTKPQIAQL QAQGLRVFADQAVASSAQGAVDQPIAVQAGPKSSNPAPLQYPSIVTGADVVQRRGIDGRGVTVAVIDSGLPAIERPERWQ RIDNTTARYNQGSRFLIYKDMLASNQITNSSDPYGHGTHVFATLADNRALPAGYSGAKVGIAPGANYVVVRALNSQGQAS YSTIIAAIDWVIEHADEYDIRVLNLSLQAEVIAPYWYDPLNQAVMHAWNEGITVVAAAGNTGPNPATIMAPANVPYIISV GAIRPAIYNDNGSDSLAAYSSAGPTESRFVKPDVVIAGSRVIAPLPADSVLANSGSAGLVSERAKLEWADLKTSQQLNYY ALSGTSMAAAEVSGIVALLLQDEPNLTNNQIKARLTGTAQLATLDDGQAAYSTWQQGAGKVVPTAVIDGSNTGAANAGMD LPTDLIVSSNPDDTSNHYQGSTEYDAVTNTFTDNTTTYSSTLATSYSTWAGSYSTWAGSYLTWAGSYSTWAGSYSTWAGS YSTWAGSYSTWAGSYSTWAGNNAAASGTTNVNAGSLVSD >Mature_599_residues MDREHRRGFFRSLLLASLFLSAIGLAQPVATTQPQSMLVQGAALSNQARAIQAVGGTVERQFARFETSVAQLTKPQIAQL QAQGLRVFADQAVASSAQGAVDQPIAVQAGPKSSNPAPLQYPSIVTGADVVQRRGIDGRGVTVAVIDSGLPAIERPERWQ RIDNTTARYNQGSRFLIYKDMLASNQITNSSDPYGHGTHVFATLADNRALPAGYSGAKVGIAPGANYVVVRALNSQGQAS YSTIIAAIDWVIEHADEYDIRVLNLSLQAEVIAPYWYDPLNQAVMHAWNEGITVVAAAGNTGPNPATIMAPANVPYIISV GAIRPAIYNDNGSDSLAAYSSAGPTESRFVKPDVVIAGSRVIAPLPADSVLANSGSAGLVSERAKLEWADLKTSQQLNYY ALSGTSMAAAEVSGIVALLLQDEPNLTNNQIKARLTGTAQLATLDDGQAAYSTWQQGAGKVVPTAVIDGSNTGAANAGMD LPTDLIVSSNPDDTSNHYQGSTEYDAVTNTFTDNTTTYSSTLATSYSTWAGSYSTWAGSYLTWAGSYSTWAGSYSTWAGS YSTWAGSYSTWAGSYSTWAGNNAAASGTTNVNAGSLVSD
Specific function: Displays serine protease activity. Seems to have a broad substrate specificity [H]
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasm (Probable). Note=Is leaked to the culture medium during the late stationary phase owing to cell lysis [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S8 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 63002; Mature: 63002
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDREHRRGFFRSLLLASLFLSAIGLAQPVATTQPQSMLVQGAALSNQARAIQAVGGTVER CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEECCHHCCHHHHHHHHCCHHHH QFARFETSVAQLTKPQIAQLQAQGLRVFADQAVASSAQGAVDQPIAVQAGPKSSNPAPLQ HHHHHHHHHHHHCCCHHHHHHHCCHHEEHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCC YPSIVTGADVVQRRGIDGRGVTVAVIDSGLPAIERPERWQRIDNTTARYNQGSRFLIYKD CCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCHHHCCCCCEEEEEEH MLASNQITNSSDPYGHGTHVFATLADNRALPAGYSGAKVGIAPGANYVVVRALNSQGQAS HHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCHH YSTIIAAIDWVIEHADEYDIRVLNLSLQAEVIAPYWYDPLNQAVMHAWNEGITVVAAAGN HHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCC TGPNPATIMAPANVPYIISVGAIRPAIYNDNGSDSLAAYSSAGPTESRFVKPDVVIAGSR CCCCCEEEEECCCCCEEEEECCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCEEEECCE VIAPLPADSVLANSGSAGLVSERAKLEWADLKTSQQLNYYALSGTSMAAAEVSGIVALLL EEECCCCCHHHCCCCCCCCCCHHHCEEEHHCCCCCCCEEEEECCCCHHHHHHCCEEEEEE QDEPNLTNNQIKARLTGTAQLATLDDGQAAYSTWQQGAGKVVPTAVIDGSNTGAANAGMD ECCCCCCCCEEEEEEECCEEEEEECCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC LPTDLIVSSNPDDTSNHYQGSTEYDAVTNTFTDNTTTYSSTLATSYSTWAGSYSTWAGSY CCCEEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCEEEHHHHHCCHHHCCCCCCCCCCCE LTWAGSYSTWAGSYSTWAGSYSTWAGSYSTWAGSYSTWAGNNAAASGTTNVNAGSLVSD EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDREHRRGFFRSLLLASLFLSAIGLAQPVATTQPQSMLVQGAALSNQARAIQAVGGTVER CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEECCHHCCHHHHHHHHCCHHHH QFARFETSVAQLTKPQIAQLQAQGLRVFADQAVASSAQGAVDQPIAVQAGPKSSNPAPLQ HHHHHHHHHHHHCCCHHHHHHHCCHHEEHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCC YPSIVTGADVVQRRGIDGRGVTVAVIDSGLPAIERPERWQRIDNTTARYNQGSRFLIYKD CCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCHHHCCCCCEEEEEEH MLASNQITNSSDPYGHGTHVFATLADNRALPAGYSGAKVGIAPGANYVVVRALNSQGQAS HHHCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCEEEECCCCCEEEEEEECCCCCHH YSTIIAAIDWVIEHADEYDIRVLNLSLQAEVIAPYWYDPLNQAVMHAWNEGITVVAAAGN HHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCC TGPNPATIMAPANVPYIISVGAIRPAIYNDNGSDSLAAYSSAGPTESRFVKPDVVIAGSR CCCCCEEEEECCCCCEEEEECCCCCEEECCCCCCCEEEECCCCCCCCCCCCCCEEEECCE VIAPLPADSVLANSGSAGLVSERAKLEWADLKTSQQLNYYALSGTSMAAAEVSGIVALLL EEECCCCCHHHCCCCCCCCCCHHHCEEEHHCCCCCCCEEEEECCCCHHHHHHCCEEEEEE QDEPNLTNNQIKARLTGTAQLATLDDGQAAYSTWQQGAGKVVPTAVIDGSNTGAANAGMD ECCCCCCCCEEEEEEECCEEEEEECCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCC LPTDLIVSSNPDDTSNHYQGSTEYDAVTNTFTDNTTTYSSTLATSYSTWAGSYSTWAGSY CCCEEEEECCCCCCCCCCCCCCCCCHHCCCCCCCCEEEHHHHHCCHHHCCCCCCCCCCCE LTWAGSYSTWAGSYSTWAGSYSTWAGSYSTWAGSYSTWAGNNAAASGTTNVNAGSLVSD EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]