| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is cpsE [H]
Identifier: 159900092
GI number: 159900092
Start: 4495759
End: 4496235
Strand: Direct
Name: cpsE [H]
Synonym: Haur_3575
Alternate gene names: 159900092
Gene position: 4495759-4496235 (Clockwise)
Preceding gene: 159900091
Following gene: 159900093
Centisome position: 70.84
GC content: 48.85
Gene sequence:
>477_bases ATGTTTACCCAAAAACGCACTGGCCAAGGTGGCCGAACCTTCCGAATGTATAAATTTCGCACAATGGTGCCCAACGCCGA GGAAATGAAAAAGCAGTTGATGCACCTCAACGAATTGCAATGGCCTGATTTTAAAATTAGCAATGATCCTCGCATTACCA AGGTTGGCAAATTCTTGCGCAAAACCAGCCTCGATGAATTACCCCAATTGTTGAATGTGATCAAAGGCGAGATGAGCCTC GTCGGCCCACGCCCAACCTCATTTGGCGCTCACACTTACGACTTATGGCAAACTGAACGCCTCGATGTTCAGCCAGGGCT AACTGGGCTATGGCAGTTGTTTGGTCGCGCTAGCACCGAATTTCATGATCGCTTGCTCTTGGATATTGCCTATATCGAAC GTCGCTGCCTGTGGCTCGATATTCAAATTCTGTTCCGCACGATTCCTGCCGTGTTGAAACAGCGGGGTGCACATTAG
Upstream 100 bases:
>100_bases ATTTGGCGAGCAAACGAATGATGGATTTGTTGATTTTATTAATGGCAATGCCCTTTTTGCTGCCATTTTGATCAAAATCG ATTCGCCCAACGGGCCGATT
Downstream 100 bases:
>100_bases TGGCACAACCAATCGCTTACATGATGTCACGGTTTCCGCATCTGTCGGAAACCTTTATTCTGCGTGAAATGCTTGAAATG GAACGGCTTGGCTGGGATGT
Product: undecaprenyl-phosphate galactose phosphotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 158
Protein sequence:
>158_residues MFTQKRTGQGGRTFRMYKFRTMVPNAEEMKKQLMHLNELQWPDFKISNDPRITKVGKFLRKTSLDELPQLLNVIKGEMSL VGPRPTSFGAHTYDLWQTERLDVQPGLTGLWQLFGRASTEFHDRLLLDIAYIERRCLWLDIQILFRTIPAVLKQRGAH
Sequences:
>Translated_158_residues MFTQKRTGQGGRTFRMYKFRTMVPNAEEMKKQLMHLNELQWPDFKISNDPRITKVGKFLRKTSLDELPQLLNVIKGEMSL VGPRPTSFGAHTYDLWQTERLDVQPGLTGLWQLFGRASTEFHDRLLLDIAYIERRCLWLDIQILFRTIPAVLKQRGAH >Mature_158_residues MFTQKRTGQGGRTFRMYKFRTMVPNAEEMKKQLMHLNELQWPDFKISNDPRITKVGKFLRKTSLDELPQLLNVIKGEMSL VGPRPTSFGAHTYDLWQTERLDVQPGLTGLWQLFGRASTEFHDRLLLDIAYIERRCLWLDIQILFRTIPAVLKQRGAH
Specific function: Galactosyl transferase is essential for the assembly of the group B streptococci (GBS) type III capsular polysaccharide. May be involved in the formation of either or both galactosidic bonds by catalyzing the addition of galactose to an oligosaccharide pr
COG id: COG2148
COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial sugar transferase family [H]
Homologues:
Organism=Escherichia coli, GI1788360, Length=168, Percent_Identity=38.0952380952381, Blast_Score=100, Evalue=8e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003362 - InterPro: IPR017475 [H]
Pfam domain/function: PF02397 Bac_transf [H]
EC number: NA
Molecular weight: Translated: 18532; Mature: 18532
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTQKRTGQGGRTFRMYKFRTMVPNAEEMKKQLMHLNELQWPDFKISNDPRITKVGKFLR CCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHH KTSLDELPQLLNVIKGEMSLVGPRPTSFGAHTYDLWQTERLDVQPGLTGLWQLFGRASTE HCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCHH FHDRLLLDIAYIERRCLWLDIQILFRTIPAVLKQRGAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFTQKRTGQGGRTFRMYKFRTMVPNAEEMKKQLMHLNELQWPDFKISNDPRITKVGKFLR CCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHH KTSLDELPQLLNVIKGEMSLVGPRPTSFGAHTYDLWQTERLDVQPGLTGLWQLFGRASTE HCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCHH FHDRLLLDIAYIERRCLWLDIQILFRTIPAVLKQRGAH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8355611; 10913080; 11773119; 12354221 [H]