Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is cpsE [H]

Identifier: 159900092

GI number: 159900092

Start: 4495759

End: 4496235

Strand: Direct

Name: cpsE [H]

Synonym: Haur_3575

Alternate gene names: 159900092

Gene position: 4495759-4496235 (Clockwise)

Preceding gene: 159900091

Following gene: 159900093

Centisome position: 70.84

GC content: 48.85

Gene sequence:

>477_bases
ATGTTTACCCAAAAACGCACTGGCCAAGGTGGCCGAACCTTCCGAATGTATAAATTTCGCACAATGGTGCCCAACGCCGA
GGAAATGAAAAAGCAGTTGATGCACCTCAACGAATTGCAATGGCCTGATTTTAAAATTAGCAATGATCCTCGCATTACCA
AGGTTGGCAAATTCTTGCGCAAAACCAGCCTCGATGAATTACCCCAATTGTTGAATGTGATCAAAGGCGAGATGAGCCTC
GTCGGCCCACGCCCAACCTCATTTGGCGCTCACACTTACGACTTATGGCAAACTGAACGCCTCGATGTTCAGCCAGGGCT
AACTGGGCTATGGCAGTTGTTTGGTCGCGCTAGCACCGAATTTCATGATCGCTTGCTCTTGGATATTGCCTATATCGAAC
GTCGCTGCCTGTGGCTCGATATTCAAATTCTGTTCCGCACGATTCCTGCCGTGTTGAAACAGCGGGGTGCACATTAG

Upstream 100 bases:

>100_bases
ATTTGGCGAGCAAACGAATGATGGATTTGTTGATTTTATTAATGGCAATGCCCTTTTTGCTGCCATTTTGATCAAAATCG
ATTCGCCCAACGGGCCGATT

Downstream 100 bases:

>100_bases
TGGCACAACCAATCGCTTACATGATGTCACGGTTTCCGCATCTGTCGGAAACCTTTATTCTGCGTGAAATGCTTGAAATG
GAACGGCTTGGCTGGGATGT

Product: undecaprenyl-phosphate galactose phosphotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MFTQKRTGQGGRTFRMYKFRTMVPNAEEMKKQLMHLNELQWPDFKISNDPRITKVGKFLRKTSLDELPQLLNVIKGEMSL
VGPRPTSFGAHTYDLWQTERLDVQPGLTGLWQLFGRASTEFHDRLLLDIAYIERRCLWLDIQILFRTIPAVLKQRGAH

Sequences:

>Translated_158_residues
MFTQKRTGQGGRTFRMYKFRTMVPNAEEMKKQLMHLNELQWPDFKISNDPRITKVGKFLRKTSLDELPQLLNVIKGEMSL
VGPRPTSFGAHTYDLWQTERLDVQPGLTGLWQLFGRASTEFHDRLLLDIAYIERRCLWLDIQILFRTIPAVLKQRGAH
>Mature_158_residues
MFTQKRTGQGGRTFRMYKFRTMVPNAEEMKKQLMHLNELQWPDFKISNDPRITKVGKFLRKTSLDELPQLLNVIKGEMSL
VGPRPTSFGAHTYDLWQTERLDVQPGLTGLWQLFGRASTEFHDRLLLDIAYIERRCLWLDIQILFRTIPAVLKQRGAH

Specific function: Galactosyl transferase is essential for the assembly of the group B streptococci (GBS) type III capsular polysaccharide. May be involved in the formation of either or both galactosidic bonds by catalyzing the addition of galactose to an oligosaccharide pr

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=168, Percent_Identity=38.0952380952381, Blast_Score=100, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362
- InterPro:   IPR017475 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 18532; Mature: 18532

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTQKRTGQGGRTFRMYKFRTMVPNAEEMKKQLMHLNELQWPDFKISNDPRITKVGKFLR
CCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHH
KTSLDELPQLLNVIKGEMSLVGPRPTSFGAHTYDLWQTERLDVQPGLTGLWQLFGRASTE
HCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCHH
FHDRLLLDIAYIERRCLWLDIQILFRTIPAVLKQRGAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFTQKRTGQGGRTFRMYKFRTMVPNAEEMKKQLMHLNELQWPDFKISNDPRITKVGKFLR
CCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHHHH
KTSLDELPQLLNVIKGEMSLVGPRPTSFGAHTYDLWQTERLDVQPGLTGLWQLFGRASTE
HCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHCCCHH
FHDRLLLDIAYIERRCLWLDIQILFRTIPAVLKQRGAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8355611; 10913080; 11773119; 12354221 [H]