Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159900091

Identifier: 159900091

GI number: 159900091

Start: 4494657

End: 4495532

Strand: Direct

Name: 159900091

Synonym: Haur_3574

Alternate gene names: NA

Gene position: 4494657-4495532 (Clockwise)

Preceding gene: 159900090

Following gene: 159900092

Centisome position: 70.82

GC content: 49.09

Gene sequence:

>876_bases
ATGAAGTACCTGCGTCGATCAATTATTGCGCTCGTTCTCTATCTTGCTGCGTTTTTCAACATCGAGCGGCTGGACTTCCA
GGGCGAGAATGTTATTGACCTACGTTCATTTGTGTATGTGCTCGGGTTGGCAGCAATCCTTACGACTATTGTGCTGCCAT
TTTTTCGGCAACGTCGGCTTTTGGTGGCCCTCACCTACTGGGGCGCGATCTACGCAATTATTCGTTTAGCATTTTTCAAT
GATGTTTCGTTTGTTGGGGTCGATATTTACTTGTCGTTAACTGAATTGGTGTTCTTATTGGTTGGTGTTCGCTTTGCCCA
CCAGGTTGCCATCGATCTTTACGATTTCGAGCAAGCTGTGATCAACATCACCTTGCCGCAAGTTAATCGCCAAATCCGCC
CGCTCAACGATTCCAACGATGAAATTCAAACTGAGATGGTGCGGAGTCGTCGCCATCGTCGCCCAATGAGTGTGCTGGTG
ATCAAGCCCGATCCCCAATCAGTCAATCTGGCGATTCATCGCAGTGTCGAAGAAGTGCAAAAATCCATGATGACGCGCTA
TGTCGTAACCAGTTTAACCCGCGTTGTCGCCGATGTTATGCGCCGAACCGACATGATTTTTGAGCAACCAAGCTCAAACC
AATTTATCGTGATGAGTCCCGAAACCAATGCTGCTAATTCTGTTTCGTTTGCGGAACGCATCAAGGCTGCTGCGTCCGAG
AGGCTGGGTGTAGATGTGTTGTGTGGAATTGCATCATTTCCCGACGATGCCCTGACATTTGACGAGTTGATCCGCGAGGC
CGATACCCGTGCGTTGCGCCAACTCAAAGGGGTAAAACCACAAGACACACGCTCGACCGTTCAGACTGAGGTTTAA

Upstream 100 bases:

>100_bases
AATTTGGGCCCGATCCTCGTTGGAATCCGATGCGGCGGAAGCTTAGCTCAGTGTTCAATTTTGGTGTAGTGTGGCACCTA
TAGCCAGAAAGTAAGCCACC

Downstream 100 bases:

>100_bases
AGCGCCGTTCATGCATCGTGCAGAAAGGAACCGTCATGGCTTCTTCACTCAACTATCGTGAAAACCCAGCCTATGCCTGG
CTGTTTCAAATTCAACCCAA

Product: putative diguanylate cyclase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MKYLRRSIIALVLYLAAFFNIERLDFQGENVIDLRSFVYVLGLAAILTTIVLPFFRQRRLLVALTYWGAIYAIIRLAFFN
DVSFVGVDIYLSLTELVFLLVGVRFAHQVAIDLYDFEQAVINITLPQVNRQIRPLNDSNDEIQTEMVRSRRHRRPMSVLV
IKPDPQSVNLAIHRSVEEVQKSMMTRYVVTSLTRVVADVMRRTDMIFEQPSSNQFIVMSPETNAANSVSFAERIKAAASE
RLGVDVLCGIASFPDDALTFDELIREADTRALRQLKGVKPQDTRSTVQTEV

Sequences:

>Translated_291_residues
MKYLRRSIIALVLYLAAFFNIERLDFQGENVIDLRSFVYVLGLAAILTTIVLPFFRQRRLLVALTYWGAIYAIIRLAFFN
DVSFVGVDIYLSLTELVFLLVGVRFAHQVAIDLYDFEQAVINITLPQVNRQIRPLNDSNDEIQTEMVRSRRHRRPMSVLV
IKPDPQSVNLAIHRSVEEVQKSMMTRYVVTSLTRVVADVMRRTDMIFEQPSSNQFIVMSPETNAANSVSFAERIKAAASE
RLGVDVLCGIASFPDDALTFDELIREADTRALRQLKGVKPQDTRSTVQTEV
>Mature_291_residues
MKYLRRSIIALVLYLAAFFNIERLDFQGENVIDLRSFVYVLGLAAILTTIVLPFFRQRRLLVALTYWGAIYAIIRLAFFN
DVSFVGVDIYLSLTELVFLLVGVRFAHQVAIDLYDFEQAVINITLPQVNRQIRPLNDSNDEIQTEMVRSRRHRRPMSVLV
IKPDPQSVNLAIHRSVEEVQKSMMTRYVVTSLTRVVADVMRRTDMIFEQPSSNQFIVMSPETNAANSVSFAERIKAAASE
RLGVDVLCGIASFPDDALTFDELIREADTRALRQLKGVKPQDTRSTVQTEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33179; Mature: 33179

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLRRSIIALVLYLAAFFNIERLDFQGENVIDLRSFVYVLGLAAILTTIVLPFFRQRRL
CHHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LVALTYWGAIYAIIRLAFFNDVSFVGVDIYLSLTELVFLLVGVRFAHQVAIDLYDFEQAV
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INITLPQVNRQIRPLNDSNDEIQTEMVRSRRHRRPMSVLVIKPDPQSVNLAIHRSVEEVQ
EEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHH
KSMMTRYVVTSLTRVVADVMRRTDMIFEQPSSNQFIVMSPETNAANSVSFAERIKAAASE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
RLGVDVLCGIASFPDDALTFDELIREADTRALRQLKGVKPQDTRSTVQTEV
CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC
>Mature Secondary Structure
MKYLRRSIIALVLYLAAFFNIERLDFQGENVIDLRSFVYVLGLAAILTTIVLPFFRQRRL
CHHHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LVALTYWGAIYAIIRLAFFNDVSFVGVDIYLSLTELVFLLVGVRFAHQVAIDLYDFEQAV
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INITLPQVNRQIRPLNDSNDEIQTEMVRSRRHRRPMSVLVIKPDPQSVNLAIHRSVEEVQ
EEEECHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHH
KSMMTRYVVTSLTRVVADVMRRTDMIFEQPSSNQFIVMSPETNAANSVSFAERIKAAASE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
RLGVDVLCGIASFPDDALTFDELIREADTRALRQLKGVKPQDTRSTVQTEV
CCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA