| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159900022
Identifier: 159900022
GI number: 159900022
Start: 4414600
End: 4415448
Strand: Reverse
Name: 159900022
Synonym: Haur_3505
Alternate gene names: NA
Gene position: 4415448-4414600 (Counterclockwise)
Preceding gene: 159900023
Following gene: 159900021
Centisome position: 69.57
GC content: 53.47
Gene sequence:
>849_bases ATGAGTAATCCACGTCGCACAAGCCGCTTGATTAGCCGCAAACCGCGTGGGCGTGCGCCGCTGGGCGTGCGTACCACCAC GCCGATGGTGCGCCCAACGGCACGAACCATTCTGCGCAGCATGCTCTTAAATGGCAAATTAGCGGCGTTGGTGTTGTTGT TGGTCGGTATTGGCTGTTTGATTGTGGTCTTTCGTTCGCCAGCCTTTGTGGTTGGCGAATTGGAGATCGAGGGCAATCGC TCGGTTAATGCTGCCACGATTAGCCAATTAGCCAATCTGCAAGGCATCTCGATTTGGGATATTGATCCGGCGGAAGTGGC CGCGCGAATTAGCCAAAACCCCTATGTGTCCACCGCCAGCGTGCAGTTGCGGATTCCCGCCCGCGTATTGGTGCGGGTGC AAGAGCGTCAGGCCGCCGTGGTTTGGAATATGGGTGGTACAAATTACGAAGTGACGGCGGGTGGCGAAGTGTTAGGCTTA GCTACGTCGATTACGACGGCAACCTTAGTGATTTACGATACCCGCACGATTCCGATTTCGGCGGGGAGCTATATTGACAC GGATGCGCTGAATTTGGCTCAAACGCTCTATTTGCGCATTCCCAAAGAGCTTGGTTGGCAACCGACGCGCTACGAATGGG ACCCATACTATGGGCTTTCGGTTTACAATGATACCAATCAAGCGGTATTTGGGCGGTTGGCTGAACAGCAGGTGAGCCTT GATTTGAAACTTGCAACGTTGCAACAAGTTCAAGCAAGTAACACTGTATGGACATTTATCGATTTACGACCGGAAAAACC CTACTATCGACCGCAGGCGACTCCAACGCCAACGGCAGGGTCGCAATAA
Upstream 100 bases:
>100_bases GCCAATATCCCAAATTGTGGGAAGCTACGGGCCTTGGCTATAGCGAATTACTCGATCGGCTGATCGATTTGGCGATTGAG CGTTATCACGAGCGAGGCCG
Downstream 100 bases:
>100_bases GGAGCACATGCGTGGAGCAGCGACAAGCTATGTGGATTCCGCTGGCGGGGCTGGGAGTCGGGGTGGCGATTGGACTTGTT TCCGGTCTGACAATCCCCTC
Product: polypeptide-transport-associated domain-containing protein
Products: NA
Alternate protein names: Polypeptide-Transport-Associated Domain Protein FtsQ-Type
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSNPRRTSRLISRKPRGRAPLGVRTTTPMVRPTARTILRSMLLNGKLAALVLLLVGIGCLIVVFRSPAFVVGELEIEGNR SVNAATISQLANLQGISIWDIDPAEVAARISQNPYVSTASVQLRIPARVLVRVQERQAAVVWNMGGTNYEVTAGGEVLGL ATSITTATLVIYDTRTIPISAGSYIDTDALNLAQTLYLRIPKELGWQPTRYEWDPYYGLSVYNDTNQAVFGRLAEQQVSL DLKLATLQQVQASNTVWTFIDLRPEKPYYRPQATPTPTAGSQ
Sequences:
>Translated_282_residues MSNPRRTSRLISRKPRGRAPLGVRTTTPMVRPTARTILRSMLLNGKLAALVLLLVGIGCLIVVFRSPAFVVGELEIEGNR SVNAATISQLANLQGISIWDIDPAEVAARISQNPYVSTASVQLRIPARVLVRVQERQAAVVWNMGGTNYEVTAGGEVLGL ATSITTATLVIYDTRTIPISAGSYIDTDALNLAQTLYLRIPKELGWQPTRYEWDPYYGLSVYNDTNQAVFGRLAEQQVSL DLKLATLQQVQASNTVWTFIDLRPEKPYYRPQATPTPTAGSQ >Mature_281_residues SNPRRTSRLISRKPRGRAPLGVRTTTPMVRPTARTILRSMLLNGKLAALVLLLVGIGCLIVVFRSPAFVVGELEIEGNRS VNAATISQLANLQGISIWDIDPAEVAARISQNPYVSTASVQLRIPARVLVRVQERQAAVVWNMGGTNYEVTAGGEVLGLA TSITTATLVIYDTRTIPISAGSYIDTDALNLAQTLYLRIPKELGWQPTRYEWDPYYGLSVYNDTNQAVFGRLAEQQVSLD LKLATLQQVQASNTVWTFIDLRPEKPYYRPQATPTPTAGSQ
Specific function: Unknown
COG id: COG1589
COG function: function code M; Cell division septal protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30983; Mature: 30852
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNPRRTSRLISRKPRGRAPLGVRTTTPMVRPTARTILRSMLLNGKLAALVLLLVGIGCL CCCHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH IVVFRSPAFVVGELEIEGNRSVNAATISQLANLQGISIWDIDPAEVAARISQNPYVSTAS HHHHCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCEEECCCHHHHHHHHCCCCCEEEEE VQLRIPARVLVRVQERQAAVVWNMGGTNYEVTAGGEVLGLATSITTATLVIYDTRTIPIS EEEEECHHHEEEECCCCEEEEEECCCCEEEEEECCCEEEEEEEEEEEEEEEEECEEEEEC AGSYIDTDALNLAQTLYLRIPKELGWQPTRYEWDPYYGLSVYNDTNQAVFGRLAEQQVSL CCCCCCHHHHHHHHHHHEECCHHHCCCCCCEECCCEECEEEECCCCHHHHHHHHHHHHEE DLKLATLQQVQASNTVWTFIDLRPEKPYYRPQATPTPTAGSQ EEEEHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SNPRRTSRLISRKPRGRAPLGVRTTTPMVRPTARTILRSMLLNGKLAALVLLLVGIGCL CCHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHH IVVFRSPAFVVGELEIEGNRSVNAATISQLANLQGISIWDIDPAEVAARISQNPYVSTAS HHHHCCCCEEEEEEEECCCCCCCHHHHHHHHCCCCCEEECCCHHHHHHHHCCCCCEEEEE VQLRIPARVLVRVQERQAAVVWNMGGTNYEVTAGGEVLGLATSITTATLVIYDTRTIPIS EEEEECHHHEEEECCCCEEEEEECCCCEEEEEECCCEEEEEEEEEEEEEEEEECEEEEEC AGSYIDTDALNLAQTLYLRIPKELGWQPTRYEWDPYYGLSVYNDTNQAVFGRLAEQQVSL CCCCCCHHHHHHHHHHHEECCHHHCCCCCCEECCCEECEEEECCCCHHHHHHHHHHHHEE DLKLATLQQVQASNTVWTFIDLRPEKPYYRPQATPTPTAGSQ EEEEHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA