| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899896
Identifier: 159899896
GI number: 159899896
Start: 4259563
End: 4260651
Strand: Reverse
Name: 159899896
Synonym: Haur_3379
Alternate gene names: NA
Gene position: 4260651-4259563 (Counterclockwise)
Preceding gene: 159899897
Following gene: 159899895
Centisome position: 67.13
GC content: 54.09
Gene sequence:
>1089_bases ATGACACAACCTTACTTTTCAACCACACCCATCCACGATCCGCGCGACTTTGTTGGGCGTGAACGTGAGATTGTTCAAAT TAACGAAGCGCTGGCGGCTGGTCGCTCGTGTGCAGTGATCGGCCCCCAAGGCAGTGGCAAAACTTCGTTGCTGCACCATA TTGGCCAAGCTGTGGCCATGGTGCTCGACGAGCCGCCTCAAGTAGTTTTCCTGAGCCTTGCCCGAGTTAACGAAGCGCGT GATTTGTATTCGCCGATGTTGCGGGCGCTGCGAGCCAATGGCGACGATGAACTCAGCCTAACCCAAGCCTTTCACGAAGC GACAACCCCACCGATGTTGCTATTGCTCGACGATTTGGAGTCGGCGGGTATGGGTTGGATTGGGGTAGTTCGTAGTGCGC TGCGTGGCTGGGTTAACGAGGGCTTTTTGCAAATTGTTGCTGCTAGCAGCCAACCGCTTGATCAGATTGCTGCTGATTGG CAAAGCACGCTCAGCCAAATAACCCTAGCGCCCATGCCTGAACGCGAAGTCCGTAGTTTGATCACGACCCTGACCCAAAG TACCAACTTGAATCCCGATCCCACCACGATCAGCCAAGTGATTAAATTGGCGGGCGGGTATCCAGCAGCAATCAAATTAG CATTAGAGCTTTGGGCGCATTCGCAAGCCACCACCCAATTTGATTGGCAACAGATGTTTCGTGAGCAACAGCAAGCCGCC TATGCTGGCAGTTCGGCTGCTGGTTATAGCACCGCGATTGAAAGCGAAGCCTTGCCAACCAAGGTGAAACAACATCCAGT TCAGCCGAGCAAGCCCGCTGCTAAGCCCGCAGAACCCCAACGCCCGCGCAGCTACAAAGCCGACGATCCCAGCGAATTTT TGATTATGCTGATTTTATTGTCGTTGGCGGTGCTGATTGGCTATTTAGTTGGCTCATGGCTGGGCTGGTTTGTGGCTGGC TTGATTATGCTGATTTGGATTGGTTTGGCTCATGCGATGGTACGCTGGCGTGGCAACGGAGCACTCAGCCATATCTATGT ACGAGCCACACGCTGGTTGCCCGTGGTGGGCCGCTTTGCCCCCAAATAA
Upstream 100 bases:
>100_bases GAACATCGCGCTTTGGAACTTGCTAAGTTTCGAGTATCATAGACATATGATGAACCTATGCTTAATTATGTTCTATGCTC TTTGTTCTATGCTCTAATTT
Downstream 100 bases:
>100_bases TTCCCACGCATGCTGATTGGCACTAGGACTAAGAACCTACTACGTTCTGGTGAAAAACTATGGTATTATCAGCCGCAGTT AGGCGAACCAAAGGCTCACA
Product: AAA ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MTQPYFSTTPIHDPRDFVGREREIVQINEALAAGRSCAVIGPQGSGKTSLLHHIGQAVAMVLDEPPQVVFLSLARVNEAR DLYSPMLRALRANGDDELSLTQAFHEATTPPMLLLLDDLESAGMGWIGVVRSALRGWVNEGFLQIVAASSQPLDQIAADW QSTLSQITLAPMPEREVRSLITTLTQSTNLNPDPTTISQVIKLAGGYPAAIKLALELWAHSQATTQFDWQQMFREQQQAA YAGSSAAGYSTAIESEALPTKVKQHPVQPSKPAAKPAEPQRPRSYKADDPSEFLIMLILLSLAVLIGYLVGSWLGWFVAG LIMLIWIGLAHAMVRWRGNGALSHIYVRATRWLPVVGRFAPK
Sequences:
>Translated_362_residues MTQPYFSTTPIHDPRDFVGREREIVQINEALAAGRSCAVIGPQGSGKTSLLHHIGQAVAMVLDEPPQVVFLSLARVNEAR DLYSPMLRALRANGDDELSLTQAFHEATTPPMLLLLDDLESAGMGWIGVVRSALRGWVNEGFLQIVAASSQPLDQIAADW QSTLSQITLAPMPEREVRSLITTLTQSTNLNPDPTTISQVIKLAGGYPAAIKLALELWAHSQATTQFDWQQMFREQQQAA YAGSSAAGYSTAIESEALPTKVKQHPVQPSKPAAKPAEPQRPRSYKADDPSEFLIMLILLSLAVLIGYLVGSWLGWFVAG LIMLIWIGLAHAMVRWRGNGALSHIYVRATRWLPVVGRFAPK >Mature_361_residues TQPYFSTTPIHDPRDFVGREREIVQINEALAAGRSCAVIGPQGSGKTSLLHHIGQAVAMVLDEPPQVVFLSLARVNEARD LYSPMLRALRANGDDELSLTQAFHEATTPPMLLLLDDLESAGMGWIGVVRSALRGWVNEGFLQIVAASSQPLDQIAADWQ STLSQITLAPMPEREVRSLITTLTQSTNLNPDPTTISQVIKLAGGYPAAIKLALELWAHSQATTQFDWQQMFREQQQAAY AGSSAAGYSTAIESEALPTKVKQHPVQPSKPAAKPAEPQRPRSYKADDPSEFLIMLILLSLAVLIGYLVGSWLGWFVAGL IMLIWIGLAHAMVRWRGNGALSHIYVRATRWLPVVGRFAPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39635; Mature: 39504
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPYFSTTPIHDPRDFVGREREIVQINEALAAGRSCAVIGPQGSGKTSLLHHIGQAVAM CCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHH VLDEPPQVVFLSLARVNEARDLYSPMLRALRANGDDELSLTQAFHEATTPPMLLLLDDLE HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEHHHH SAGMGWIGVVRSALRGWVNEGFLQIVAASSQPLDQIAADWQSTLSQITLAPMPEREVRSL HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHH ITTLTQSTNLNPDPTTISQVIKLAGGYPAAIKLALELWAHSQATTQFDWQQMFREQQQAA HHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH YAGSSAAGYSTAIESEALPTKVKQHPVQPSKPAAKPAEPQRPRSYKADDPSEFLIMLILL HCCCCCCCCHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH SLAVLIGYLVGSWLGWFVAGLIMLIWIGLAHAMVRWRGNGALSHIYVRATRWLPVVGRFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCC PK CC >Mature Secondary Structure TQPYFSTTPIHDPRDFVGREREIVQINEALAAGRSCAVIGPQGSGKTSLLHHIGQAVAM CCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHH VLDEPPQVVFLSLARVNEARDLYSPMLRALRANGDDELSLTQAFHEATTPPMLLLLDDLE HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEEEEHHHH SAGMGWIGVVRSALRGWVNEGFLQIVAASSQPLDQIAADWQSTLSQITLAPMPEREVRSL HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEECCCCCHHHHHHH ITTLTQSTNLNPDPTTISQVIKLAGGYPAAIKLALELWAHSQATTQFDWQQMFREQQQAA HHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH YAGSSAAGYSTAIESEALPTKVKQHPVQPSKPAAKPAEPQRPRSYKADDPSEFLIMLILL HCCCCCCCCHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH SLAVLIGYLVGSWLGWFVAGLIMLIWIGLAHAMVRWRGNGALSHIYVRATRWLPVVGRFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCC PK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA