| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899835
Identifier: 159899835
GI number: 159899835
Start: 4181649
End: 4182830
Strand: Reverse
Name: 159899835
Synonym: Haur_3318
Alternate gene names: NA
Gene position: 4182830-4181649 (Counterclockwise)
Preceding gene: 159899836
Following gene: 159899830
Centisome position: 65.91
GC content: 53.81
Gene sequence:
>1182_bases ATGATGAATGATCAACAACAACAATCATTACTAACCGCTGCCTTGATTGCTGGAGGTATTGTTGGTGGTGTATTAGGGGC ACGCAGTCGCCGTAACCACCCCAAAACCTTGGGCGAAAAAGTTGCCCTGCTAACCGAAAATTTGCGGGATCAGGTTGAAC ATCGCGCCGCTGATGCCAATAGTTATCTTCACAGCCTGAATAAACAAGCCCGCAAAGAGTTGAAACGTGAACAAAAGAAA CTGCGCAAAGCTGGCAAGCAGGCCAATCAACGCTTAAACGCTAGCTTGGAGACTGGCCGCGAACAAATTGGACAGGCAGT CGATCAAATGGGCAAAAAAGTTGCTGATGGCCGTGATAAAGGCAATGCGCTGTTTGGGGCGGCGACTGCTGGTTTGGCTG CAGTTGCTGCCGCCAGCCGCGAACGGGCTAGCGATTTGGGCGACCAAACCAAAAGTCGTTTGGCCGATGTTCGTGAACAA GCGCTGGATCAAGGCGAAACGCTTGCAGATAAAGCCAAAAATATTGTGGCCGAGGTGCGCGAGCGCTTGAGTAGCACCAG CGAAAGTGTGCTTGAACAAGCTGATGATTTGCGGCATCGTGCGGTCGATGTGGCGAGCAGCAAAAGCGCCGATGCCCGCG ATCAAGCCAATGATTTGGTTCAGCGTTTGAGCGGTATCGTCCAAGAGTTTTTGGCAACCACAACTGAACGCGCCAAAGAA GCGCGTGAGCACGCTCCTGATGCATTGCGCTCAGTCGCTCAAACCGTCAGCGCCAAAGCCCAAGATGTTAGTGCCAGCGT TATTCCAGCGGTTGCTGGCGCTGCCTCAGTAGTTGGGGAACGCGCCAAGGAAACGGCTTCTGTCGTTGGTGAGCGAGCTA AAGATGCCGCCAATGTGGTTGGGGAACGCGCCAAGGAAACGGCTTCGGTGGTGGGTGAACGCGCCAAAGATGCTGCGAAT GTGGTTGGTGAAACTACCCAGCATGCGGCCCAAGCTGTAGCCCATAAAACTGGTGAAGTTGCGACTGAGGTTGGCCGTAA AGGTCGGCGTGCCCGCACTGGCTTGCGTTCGTTTATTTTGGGGATTGTGGCTGGATTGTTGACCACACCCGCTACTGGCG AGCAAGTACGGCGCGATTTGCGTCAAAAACTCGAAACGAACCTCAATCGCGTGCTGGGCTAA
Upstream 100 bases:
>100_bases CCTTTGTGTCCTTCGTGGATCAACACGTCCAACTCCCTTGGTACAGGGTTTGCTATAGGTTTGGCAGATAGCTGCTCGAA TCCTAGAGCAAAGGAGTTTG
Downstream 100 bases:
>100_bases ATTTGCCAAGCCTCTTCCTAAGCGCAATAAAGCCCCGGCAACCGTCATTGCCGGGGCTTTTGATTATATAAAACGTTTTT TAGAAGTGATGAATTTCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MMNDQQQQSLLTAALIAGGIVGGVLGARSRRNHPKTLGEKVALLTENLRDQVEHRAADANSYLHSLNKQARKELKREQKK LRKAGKQANQRLNASLETGREQIGQAVDQMGKKVADGRDKGNALFGAATAGLAAVAAASRERASDLGDQTKSRLADVREQ ALDQGETLADKAKNIVAEVRERLSSTSESVLEQADDLRHRAVDVASSKSADARDQANDLVQRLSGIVQEFLATTTERAKE AREHAPDALRSVAQTVSAKAQDVSASVIPAVAGAASVVGERAKETASVVGERAKDAANVVGERAKETASVVGERAKDAAN VVGETTQHAAQAVAHKTGEVATEVGRKGRRARTGLRSFILGIVAGLLTTPATGEQVRRDLRQKLETNLNRVLG
Sequences:
>Translated_393_residues MMNDQQQQSLLTAALIAGGIVGGVLGARSRRNHPKTLGEKVALLTENLRDQVEHRAADANSYLHSLNKQARKELKREQKK LRKAGKQANQRLNASLETGREQIGQAVDQMGKKVADGRDKGNALFGAATAGLAAVAAASRERASDLGDQTKSRLADVREQ ALDQGETLADKAKNIVAEVRERLSSTSESVLEQADDLRHRAVDVASSKSADARDQANDLVQRLSGIVQEFLATTTERAKE AREHAPDALRSVAQTVSAKAQDVSASVIPAVAGAASVVGERAKETASVVGERAKDAANVVGERAKETASVVGERAKDAAN VVGETTQHAAQAVAHKTGEVATEVGRKGRRARTGLRSFILGIVAGLLTTPATGEQVRRDLRQKLETNLNRVLG >Mature_393_residues MMNDQQQQSLLTAALIAGGIVGGVLGARSRRNHPKTLGEKVALLTENLRDQVEHRAADANSYLHSLNKQARKELKREQKK LRKAGKQANQRLNASLETGREQIGQAVDQMGKKVADGRDKGNALFGAATAGLAAVAAASRERASDLGDQTKSRLADVREQ ALDQGETLADKAKNIVAEVRERLSSTSESVLEQADDLRHRAVDVASSKSADARDQANDLVQRLSGIVQEFLATTTERAKE AREHAPDALRSVAQTVSAKAQDVSASVIPAVAGAASVVGERAKETASVVGERAKDAANVVGERAKETASVVGERAKDAAN VVGETTQHAAQAVAHKTGEVATEVGRKGRRARTGLRSFILGIVAGLLTTPATGEQVRRDLRQKLETNLNRVLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41735; Mature: 41735
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNDQQQQSLLTAALIAGGIVGGVLGARSRRNHPKTLGEKVALLTENLRDQVEHRAADAN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SYLHSLNKQARKELKREQKKLRKAGKQANQRLNASLETGREQIGQAVDQMGKKVADGRDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GNALFGAATAGLAAVAAASRERASDLGDQTKSRLADVREQALDQGETLADKAKNIVAEVR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ERLSSTSESVLEQADDLRHRAVDVASSKSADARDQANDLVQRLSGIVQEFLATTTERAKE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AREHAPDALRSVAQTVSAKAQDVSASVIPAVAGAASVVGERAKETASVVGERAKDAANVV HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GERAKETASVVGERAKDAANVVGETTQHAAQAVAHKTGEVATEVGRKGRRARTGLRSFIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GIVAGLLTTPATGEQVRRDLRQKLETNLNRVLG HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMNDQQQQSLLTAALIAGGIVGGVLGARSRRNHPKTLGEKVALLTENLRDQVEHRAADAN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SYLHSLNKQARKELKREQKKLRKAGKQANQRLNASLETGREQIGQAVDQMGKKVADGRDK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GNALFGAATAGLAAVAAASRERASDLGDQTKSRLADVREQALDQGETLADKAKNIVAEVR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH ERLSSTSESVLEQADDLRHRAVDVASSKSADARDQANDLVQRLSGIVQEFLATTTERAKE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AREHAPDALRSVAQTVSAKAQDVSASVIPAVAGAASVVGERAKETASVVGERAKDAANVV HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GERAKETASVVGERAKDAANVVGETTQHAAQAVAHKTGEVATEVGRKGRRARTGLRSFIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GIVAGLLTTPATGEQVRRDLRQKLETNLNRVLG HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA