| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899830
Identifier: 159899830
GI number: 159899830
Start: 4177824
End: 4178921
Strand: Reverse
Name: 159899830
Synonym: Haur_3313
Alternate gene names: NA
Gene position: 4178921-4177824 (Counterclockwise)
Preceding gene: 159899835
Following gene: 159899828
Centisome position: 65.85
GC content: 49.91
Gene sequence:
>1098_bases ATGAAACGATTCTATATTGTTTTGGTACTAATTAGTTTGCTGTCTGGGTGTGATATCGATCAGCCACAACCAACCGTTGT GGTTATTCCGACCTTGGATTTACGCCCAACGCCCACGCTATTGGCGCTGGCTACCGTTCGCCCAACTCCCAGCATCAATC AACCAACAACTGTGCCTTTGGCAACGCCAAGTGTTGGTACTAACACGGTTATAAGTGCGAGCGATCAGCTATTAGTTGAC AAGAATGATGTTGTTCGGACACAATTTGGCCCATTATCGCCGAGCCAGCAATGGCTCATCACGCAATCAATCACTCAAGA GCAATTCGAGTTGCATGCGCCAGGCTTGAGTTTTATAGCGCTGAGCCGCAGTTATCAGGGCCAAGCTTTGGGTTGGTCGA GTGATGGAGCGTTGCTCTTGTGGCGTTCGCAAGCCCAGCCTGATTTGCTGCAAGCGATCGAGCCATTTAGCGGCCAATCG GCTACGGTACTGACCTCGACCAATGGCTTGATTCAAGCCGCCTTGATGACCAACAGTGCGCTGTATTATGCGGCGGGTGA TGATGATTTGCGGATTATGCAAGTGGGTGGTAATACACAGGAGCAGGTGATTATTCGGCTGCCCAAGCGGCAATTGCTGG CTGGGGGATTACAACTTAGCCCAAATCGCGATCAGTTGGCGTTGTTGCTGCAAGTGCGTGATCAAACTGCTTTGGAATTG CAGCTTTTCGATCTGCCAAGTAACCAAATTCGGTTGCTCGATCAAAGCCAACGTGGCACGAATACGCCGCGCTTGGTTTG GAATGCCCGTGGAGCCTTGGCCTACTACCTTGGCGATGATTTTCGGATTTACGAACCAAGCCTTAATACGATTCAGGCGA CTAATTTGGGGGTAGAGCCGTTGGCTTGGCTTGATGATGGGATTATCGTTCGCAGCTTGGATCGCAATGCGCTGGTCTAT TGGTCGCCAACCCAAGTCTATCCAATTAATGATTCTGCTGGCGAACCACGCTATGCCAACGATTTGCAAGCATTGGATCA AACACAGTTTTTGTTGCTCAATCAAGGGGCAATTTGGCAGATTCAGCTTGAGCAGTAG
Upstream 100 bases:
>100_bases GACGAATTACCAGTCGTGGTGCGGTTGCAATGATTGTATCATTCGTCATAGGCTGCCTGTTGTTGATAACCGTTTCCAAC ATTTATTATAGCATGGTGAT
Downstream 100 bases:
>100_bases TTCGCTATCAGTTTTCATTTCTTCGCCCACCAGTCCACTATCTTTCAAAGGTGGGTTTTTAATACGCATGGGTGATCACC ACCCTTCCGTCCCGCCTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MKRFYIVLVLISLLSGCDIDQPQPTVVVIPTLDLRPTPTLLALATVRPTPSINQPTTVPLATPSVGTNTVISASDQLLVD KNDVVRTQFGPLSPSQQWLITQSITQEQFELHAPGLSFIALSRSYQGQALGWSSDGALLLWRSQAQPDLLQAIEPFSGQS ATVLTSTNGLIQAALMTNSALYYAAGDDDLRIMQVGGNTQEQVIIRLPKRQLLAGGLQLSPNRDQLALLLQVRDQTALEL QLFDLPSNQIRLLDQSQRGTNTPRLVWNARGALAYYLGDDFRIYEPSLNTIQATNLGVEPLAWLDDGIIVRSLDRNALVY WSPTQVYPINDSAGEPRYANDLQALDQTQFLLLNQGAIWQIQLEQ
Sequences:
>Translated_365_residues MKRFYIVLVLISLLSGCDIDQPQPTVVVIPTLDLRPTPTLLALATVRPTPSINQPTTVPLATPSVGTNTVISASDQLLVD KNDVVRTQFGPLSPSQQWLITQSITQEQFELHAPGLSFIALSRSYQGQALGWSSDGALLLWRSQAQPDLLQAIEPFSGQS ATVLTSTNGLIQAALMTNSALYYAAGDDDLRIMQVGGNTQEQVIIRLPKRQLLAGGLQLSPNRDQLALLLQVRDQTALEL QLFDLPSNQIRLLDQSQRGTNTPRLVWNARGALAYYLGDDFRIYEPSLNTIQATNLGVEPLAWLDDGIIVRSLDRNALVY WSPTQVYPINDSAGEPRYANDLQALDQTQFLLLNQGAIWQIQLEQ >Mature_365_residues MKRFYIVLVLISLLSGCDIDQPQPTVVVIPTLDLRPTPTLLALATVRPTPSINQPTTVPLATPSVGTNTVISASDQLLVD KNDVVRTQFGPLSPSQQWLITQSITQEQFELHAPGLSFIALSRSYQGQALGWSSDGALLLWRSQAQPDLLQAIEPFSGQS ATVLTSTNGLIQAALMTNSALYYAAGDDDLRIMQVGGNTQEQVIIRLPKRQLLAGGLQLSPNRDQLALLLQVRDQTALEL QLFDLPSNQIRLLDQSQRGTNTPRLVWNARGALAYYLGDDFRIYEPSLNTIQATNLGVEPLAWLDDGIIVRSLDRNALVY WSPTQVYPINDSAGEPRYANDLQALDQTQFLLLNQGAIWQIQLEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40238; Mature: 40238
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFYIVLVLISLLSGCDIDQPQPTVVVIPTLDLRPTPTLLALATVRPTPSINQPTTVPL CCEEEHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEE ATPSVGTNTVISASDQLLVDKNDVVRTQFGPLSPSQQWLITQSITQEQFELHAPGLSFIA ECCCCCCCEEEECCCEEEECCCCEEEEECCCCCCCCCEEEEHHCCHHHEEEECCCEEEEE LSRSYQGQALGWSSDGALLLWRSQAQPDLLQAIEPFSGQSATVLTSTNGLIQAALMTNSA EECCCCCCEEEECCCCEEEEECCCCCCHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCE LYYAAGDDDLRIMQVGGNTQEQVIIRLPKRQLLAGGLQLSPNRDQLALLLQVRDQTALEL EEEEECCCCEEEEEECCCCCEEEEEECCCHHHHHCCEEECCCCCCEEEEEEECCCCEEEE QLFDLPSNQIRLLDQSQRGTNTPRLVWNARGALAYYLGDDFRIYEPSLNTIQATNLGVEP EEEECCCCEEEEEECCCCCCCCCEEEEECCCEEEEEECCCEEEECCCCCEEEECCCCCCC LAWLDDGIIVRSLDRNALVYWSPTQVYPINDSAGEPRYANDLQALDQTQFLLLNQGAIWQ CEECCCCEEEEECCCCEEEEECCCEEEECCCCCCCCCCCHHHHHCCCCEEEEEECCCEEE IQLEQ EEECC >Mature Secondary Structure MKRFYIVLVLISLLSGCDIDQPQPTVVVIPTLDLRPTPTLLALATVRPTPSINQPTTVPL CCEEEHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEEE ATPSVGTNTVISASDQLLVDKNDVVRTQFGPLSPSQQWLITQSITQEQFELHAPGLSFIA ECCCCCCCEEEECCCEEEECCCCEEEEECCCCCCCCCEEEEHHCCHHHEEEECCCEEEEE LSRSYQGQALGWSSDGALLLWRSQAQPDLLQAIEPFSGQSATVLTSTNGLIQAALMTNSA EECCCCCCEEEECCCCEEEEECCCCCCHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCE LYYAAGDDDLRIMQVGGNTQEQVIIRLPKRQLLAGGLQLSPNRDQLALLLQVRDQTALEL EEEEECCCCEEEEEECCCCCEEEEEECCCHHHHHCCEEECCCCCCEEEEEEECCCCEEEE QLFDLPSNQIRLLDQSQRGTNTPRLVWNARGALAYYLGDDFRIYEPSLNTIQATNLGVEP EEEECCCCEEEEEECCCCCCCCCEEEEECCCEEEEEECCCEEEECCCCCEEEECCCCCCC LAWLDDGIIVRSLDRNALVYWSPTQVYPINDSAGEPRYANDLQALDQTQFLLLNQGAIWQ CEECCCCEEEEECCCCEEEEECCCEEEECCCCCCCCCCCHHHHHCCCCEEEEEECCCEEE IQLEQ EEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA