| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899772
Identifier: 159899772
GI number: 159899772
Start: 4116827
End: 4117174
Strand: Reverse
Name: 159899772
Synonym: Haur_3254
Alternate gene names: NA
Gene position: 4117174-4116827 (Counterclockwise)
Preceding gene: 159899773
Following gene: 159899771
Centisome position: 64.87
GC content: 46.84
Gene sequence:
>348_bases GTGCGTTTGAAAAGCAGATCGAGGCAGATGATCAAACAACGACTAACAATACTTGGCTATGGCCTGATTGGCTTACTAAT TGAGTTTTGCTACCTTTTTCCCAGCAGCGAATATCGTTCAGCCCAAAGTATTCCGGTCTATGATCCTGATACGGTTTTGG TGATCCAGTGGTTTGTGGCAGGCTTGATTGTGCCTGTTAGCTTCTTGTTGGTTCGGGCAATTCGTCGGCGCAATCAGCGT TTTCGTTGGGTTAAGTATGGTTTGTTGCTGGTTGCGTTGGCCTTGCTGAGTTGGCACTGGTTTACGTTAAATAGTCATAG CTACCCTTTCCCCGCAGCCTTGGGTTAA
Upstream 100 bases:
>100_bases GAGCAGCAACGTTTGGTTTTGCCAGCTACACCATTACAGTAATTGATTCAGTGATTCTAGTTTGAAAACCCTTGTCAATG TAGGTTGATAAGGGTTTTTG
Downstream 100 bases:
>100_bases CTGCATAAATATACCAAAATAAGTTGAATGAACTAGCTAATAGCATGTTGACAAGTATGTTTGGATTTATTATGATGATA GGCATTAATTCGTCGCTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MRLKSRSRQMIKQRLTILGYGLIGLLIEFCYLFPSSEYRSAQSIPVYDPDTVLVIQWFVAGLIVPVSFLLVRAIRRRNQR FRWVKYGLLLVALALLSWHWFTLNSHSYPFPAALG
Sequences:
>Translated_115_residues MRLKSRSRQMIKQRLTILGYGLIGLLIEFCYLFPSSEYRSAQSIPVYDPDTVLVIQWFVAGLIVPVSFLLVRAIRRRNQR FRWVKYGLLLVALALLSWHWFTLNSHSYPFPAALG >Mature_115_residues MRLKSRSRQMIKQRLTILGYGLIGLLIEFCYLFPSSEYRSAQSIPVYDPDTVLVIQWFVAGLIVPVSFLLVRAIRRRNQR FRWVKYGLLLVALALLSWHWFTLNSHSYPFPAALG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13416; Mature: 13416
Theoretical pI: Translated: 11.14; Mature: 11.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLKSRSRQMIKQRLTILGYGLIGLLIEFCYLFPSSEYRSAQSIPVYDPDTVLVIQWFVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHH GLIVPVSFLLVRAIRRRNQRFRWVKYGLLLVALALLSWHWFTLNSHSYPFPAALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCC >Mature Secondary Structure MRLKSRSRQMIKQRLTILGYGLIGLLIEFCYLFPSSEYRSAQSIPVYDPDTVLVIQWFVA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHHHHHHHH GLIVPVSFLLVRAIRRRNQRFRWVKYGLLLVALALLSWHWFTLNSHSYPFPAALG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA