Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899771

Identifier: 159899771

GI number: 159899771

Start: 4115352

End: 4116611

Strand: Reverse

Name: 159899771

Synonym: Haur_3253

Alternate gene names: NA

Gene position: 4116611-4115352 (Counterclockwise)

Preceding gene: 159899772

Following gene: 159899770

Centisome position: 64.86

GC content: 45.0

Gene sequence:

>1260_bases
ATGTCCGCAGACATTATTGCCAATCACTACGAGGCTGTAGAACAAGCCGGAGTACGCTTCAAAAAATTGTATGATTACCA
AGTGCAGATGGAAACAATGATTCGCCAGATGTACGAGCAACTTCGCAACGATGGATGGCAAGGTACGGCTGCCCAAGCAT
TCTTTGTTGAAATGACCGATGTTGTGTTTCCTACCTTGCAACGGTTGCAAAATACCTTGCTTGTGAGCAGTGAGTTGACC
AAACAAATCAATCAGATCTTCCGTCAAGCTGAAGAAGCGGCTGCAAAATGTATTACGTTTGATAGTGGTTCAATTGGTGG
CATGCTGGCGGATGCTGGTCTTGCTGCTGGTCATGGGTTGGCGGGTGTGAGCATTGGTGCTGCGCTATTCGATGATACGT
CAAAGCCGGATTTACGCAAAACAATCTTCAACGACGATTACATGAATCGTTTGGTTGGCTTAAAAATGCAAGGTATGGAT
GTACCTGAACTGAATAAAGCTATGGAAACCATTATTAATGACAAAGCTTCAGAAGCCGATGTTCAAGCGGCTTTGGTCAA
AATTGCTAAATTGCGCGATGTGCCACTGGAGAAAATTCAGGCCGACCACAAGAGGTTTGTCGAATTACGGAAGCGAGCCA
CCGAAAAAGGTGACGTTGATCAACTTGATCAAGATCGACATCCTGACTTTTTAGGCAGTACCACAAGTTTACGGTTTGGC
AAAGTTCTTGGCGATGTCTTTGGTATCGATCCAGTTTTTGGTTCATTGCTCAGTCCTACAGGCGGCTTAGTGGGTTACGG
TAATATTGCGATTGATGCTAAGGAACGTCCAGTTGGCTATCACGGCATCATGCACGACGCAGGTGGGTATCTGCTCAAAC
ATCATGAGATGGGACCAGGCTATGATTACCTTGGCTTGGAAGGCCGTAATCCCACTCACCCATTGACTGGTCAAGAGTCA
GGCATTCGTTATTGGAATCAGAAATTAGCCTATGGATTTATTGATGGCGATGGTATTAATCTTAATAACCCCGTCCAAAA
ATTGGCTGAATACGCGGTTATTGATGCTGTAGATCATAGATTGGGTCAAATTGTGGATGTTCATGAAGGGCTTAAAACCG
TTAAAAATGCGGCGAACGATGGCTGGAATGCCGCCAAAGATGCGGCGAACGATGGTTGGCATGCAACCAAAGATGCGGCA
AGTGATCGATGGAATGCTGCTTCAAAATCAGCGAAAGATATATTTTCTTTTCTATTCTAG

Upstream 100 bases:

>100_bases
TCGTTTTGTAGTCAAACATGATTAGCACATGCGCTTGATCGTGGTAGGTTTTTTGGTATTTTATCGGCACATTTGTGCCC
ATAATCCCTAGGGAGGCTAT

Downstream 100 bases:

>100_bases
ATTCACCCTAGCGTGATTTTGCTTGATCTGCCGGGATAATTCGGCAGATCAGGCTCCTACCATGTTTTGGAGGCTGTGAT
GCAAGCGATTCGTGAACTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MSADIIANHYEAVEQAGVRFKKLYDYQVQMETMIRQMYEQLRNDGWQGTAAQAFFVEMTDVVFPTLQRLQNTLLVSSELT
KQINQIFRQAEEAAAKCITFDSGSIGGMLADAGLAAGHGLAGVSIGAALFDDTSKPDLRKTIFNDDYMNRLVGLKMQGMD
VPELNKAMETIINDKASEADVQAALVKIAKLRDVPLEKIQADHKRFVELRKRATEKGDVDQLDQDRHPDFLGSTTSLRFG
KVLGDVFGIDPVFGSLLSPTGGLVGYGNIAIDAKERPVGYHGIMHDAGGYLLKHHEMGPGYDYLGLEGRNPTHPLTGQES
GIRYWNQKLAYGFIDGDGINLNNPVQKLAEYAVIDAVDHRLGQIVDVHEGLKTVKNAANDGWNAAKDAANDGWHATKDAA
SDRWNAASKSAKDIFSFLF

Sequences:

>Translated_419_residues
MSADIIANHYEAVEQAGVRFKKLYDYQVQMETMIRQMYEQLRNDGWQGTAAQAFFVEMTDVVFPTLQRLQNTLLVSSELT
KQINQIFRQAEEAAAKCITFDSGSIGGMLADAGLAAGHGLAGVSIGAALFDDTSKPDLRKTIFNDDYMNRLVGLKMQGMD
VPELNKAMETIINDKASEADVQAALVKIAKLRDVPLEKIQADHKRFVELRKRATEKGDVDQLDQDRHPDFLGSTTSLRFG
KVLGDVFGIDPVFGSLLSPTGGLVGYGNIAIDAKERPVGYHGIMHDAGGYLLKHHEMGPGYDYLGLEGRNPTHPLTGQES
GIRYWNQKLAYGFIDGDGINLNNPVQKLAEYAVIDAVDHRLGQIVDVHEGLKTVKNAANDGWNAAKDAANDGWHATKDAA
SDRWNAASKSAKDIFSFLF
>Mature_418_residues
SADIIANHYEAVEQAGVRFKKLYDYQVQMETMIRQMYEQLRNDGWQGTAAQAFFVEMTDVVFPTLQRLQNTLLVSSELTK
QINQIFRQAEEAAAKCITFDSGSIGGMLADAGLAAGHGLAGVSIGAALFDDTSKPDLRKTIFNDDYMNRLVGLKMQGMDV
PELNKAMETIINDKASEADVQAALVKIAKLRDVPLEKIQADHKRFVELRKRATEKGDVDQLDQDRHPDFLGSTTSLRFGK
VLGDVFGIDPVFGSLLSPTGGLVGYGNIAIDAKERPVGYHGIMHDAGGYLLKHHEMGPGYDYLGLEGRNPTHPLTGQESG
IRYWNQKLAYGFIDGDGINLNNPVQKLAEYAVIDAVDHRLGQIVDVHEGLKTVKNAANDGWNAAKDAANDGWHATKDAAS
DRWNAASKSAKDIFSFLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46052; Mature: 45921

Theoretical pI: Translated: 5.43; Mature: 5.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSADIIANHYEAVEQAGVRFKKLYDYQVQMETMIRQMYEQLRNDGWQGTAAQAFFVEMTD
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
VVFPTLQRLQNTLLVSSELTKQINQIFRQAEEAAAKCITFDSGSIGGMLADAGLAAGHGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHCCHHCCCCC
AGVSIGAALFDDTSKPDLRKTIFNDDYMNRLVGLKMQGMDVPELNKAMETIINDKASEAD
HHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHCCEECCCCCHHHHHHHHHHHCCCCHHHH
VQAALVKIAKLRDVPLEKIQADHKRFVELRKRATEKGDVDQLDQDRHPDFLGSTTSLRFG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCHHHHH
KVLGDVFGIDPVFGSLLSPTGGLVGYGNIAIDAKERPVGYHGIMHDAGGYLLKHHEMGPG
HHHHHHHCCCHHHHHHHCCCCCEEECCCEEEECCCCCCCCHHHHHCCCCCEEEECCCCCC
YDYLGLEGRNPTHPLTGQESGIRYWNQKLAYGFIDGDGINLNNPVQKLAEYAVIDAVDHR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
LGQIVDVHEGLKTVKNAANDGWNAAKDAANDGWHATKDAASDRWNAASKSAKDIFSFLF
HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHC
>Mature Secondary Structure 
SADIIANHYEAVEQAGVRFKKLYDYQVQMETMIRQMYEQLRNDGWQGTAAQAFFVEMTD
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
VVFPTLQRLQNTLLVSSELTKQINQIFRQAEEAAAKCITFDSGSIGGMLADAGLAAGHGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHCCHHCCCCC
AGVSIGAALFDDTSKPDLRKTIFNDDYMNRLVGLKMQGMDVPELNKAMETIINDKASEAD
HHHHHHHHHHCCCCCCHHHHHHCCHHHHHHHHCCEECCCCCHHHHHHHHHHHCCCCHHHH
VQAALVKIAKLRDVPLEKIQADHKRFVELRKRATEKGDVDQLDQDRHPDFLGSTTSLRFG
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCHHHHH
KVLGDVFGIDPVFGSLLSPTGGLVGYGNIAIDAKERPVGYHGIMHDAGGYLLKHHEMGPG
HHHHHHHCCCHHHHHHHCCCCCEEECCCEEEECCCCCCCCHHHHHCCCCCEEEECCCCCC
YDYLGLEGRNPTHPLTGQESGIRYWNQKLAYGFIDGDGINLNNPVQKLAEYAVIDAVDHR
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
LGQIVDVHEGLKTVKNAANDGWNAAKDAANDGWHATKDAASDRWNAASKSAKDIFSFLF
HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA