| Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
|---|---|
| Accession | NC_009972 |
| Length | 6,346,587 |
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The map label for this gene is 159899759
Identifier: 159899759
GI number: 159899759
Start: 4101921
End: 4104290
Strand: Reverse
Name: 159899759
Synonym: Haur_3241
Alternate gene names: NA
Gene position: 4104290-4101921 (Counterclockwise)
Preceding gene: 159899765
Following gene: 159899758
Centisome position: 64.67
GC content: 53.16
Gene sequence:
>2370_bases ATGGGTGACCGTACTCGATCACTCGCCAGAATTAAATGGCATGCCACAACCAAAATGACTGCCCAGGAGCACATTGGAAT CCCTATGAACAAACCCAAGCAGGATGTTGCGGTTTTTATCGACTTCGAGAACATTTATGTTTCAGTTCGAGAGAAGTTCG ACGCTACCCCTAATTTCGAAGCTTTGATGGAACGTTGCGAGGACTATGGCCGTGTTGTAGTTGCTCGCGCTTACGCCGAT TGGTATCGTTACCCACGCATTACCAGCGCTTTGTTTGCCAATAATATCGAGCCAATGTATGTGCCAACCTACTATTATGA TAAGGACGAAGGTCGCATGGGCCGTCCGATCAAAAATAGTGTGGATATGCACATGTGTATCGATGCAATGCGCACGCTCT ACACACGCACCAACATTGGTTCGTATATCTTTATCACTGGCGACCGCGATTTTATCGCCTTGGTCAACTGTGTGCGCCAA GAAGGTAAAGATGTGATTATCGTTGGCATTGGCGGGGCTGCCTCCAGCCATCTCGCTCAAAGTGCCGATGAATTTTTGTT CTACGAGCAAATTGTCGATATTCGCCCGATGGGTGGCCGTCGCAACGAGCGCCACGAAAAAACCTTCGAGCGGGTCGAGC GCCCTGAACGGGTTGAACGTAACGATCGTAGCGAACGCCCAGAACGCCCTGAACGCAGCGAACGCCCAGAACGGTCAGAA CGTAGCGAACGCAATGGCCGCGATGATCGCCGCCGCGAACGCGAACGCCCTGAGAAGAATGCCGAGCCAACTTTCGAGCG GCTTGATTCACGTTCGGAGAAAACAGCCGAACCACGGGTTGAAAAGCCCGCTGAAAAAGCTCCCGAAATTGTGGTACGGC CAGCACCAAGCACCGCGCCAGTCGTGGCAACCACCCCCAGCAATCCCGATGCGGCAATTTATGATAAGTTGGTTGAGGCC TTGCACTTAGCGCGGAAACGTGGCTATGTGACTTCATTTGGCTCGCTCAAGGTGCTGATGAAAGAACTGCTGCCCAACTT CAAAGAAAGTCGCTATCGCGATGCTCAAGGCAAGCCGTTCACCAAATTTACCGATTTTGTGCGCGAAGCCGAACGACTTG GCAAGATTCAAATCTTCACCAGCGGCACAGTTAACGAAGTCTTCTTGCCCGATGAAGATCCTTACAAGCTTTCGCAATTT GCTGAAGATTTGCCCTCAGTTGAGGCCGAACGCGAACTCGAACAAGAGCTTGAGTTGCAAGCCGAATCGATCGCCCCAAT CACGATTGAAACAATTGGCATCGCCGATGAGCCGATGGAATTGGCCGATGGCGAAGAAGTTGCCCCAAGCAGCGAACGTG GCGACCGCAATGGCCGTCGTCGCCGCCGCCGTGGCAGCAGCCGCAGCGAACAACCAGCCGTCGATGTGCTGCCCGAAGAG TTGAGCGAAACAATCCTTGTACCAGCACCAACCGAAGGTTTCAGCTTTGGCGAACGTGAATGGCAGTTGTTCTATCAGGT GATGGGCGTGTATAGCGAGCCAGTGCCATTCGCCGATATCTTTAACGATCTTCGCGAAATGCGCAACACGGCTGAGCTTG ATCTGACCAATAATGCCTTGAAGGAATTGATCAAACAAGCGATCAACGAAGGCAAAGTCCAGCGCTCAAATCGTGGAGCC AAAGCCCACTATCGCTTGGTGCTCAACCCTGAGCAGTTTGATGGTGCAATAACAACCTTCGAGCCAAGCGATCTTGAAGC CTTTGATGATGGCCCAAGCTTGCCTGACCTGGTTGATGAAGAACCACGTTTGTTGCCAGCCATGATCGGTGGCCAAACCA TCGCGATTGACGATGATTACACTGCGCCAATCGATGAAGTGGCCTTGCCCGAAAGCTTTGAAGAACAGCCGTTGCCTGAA AGTGATGCCGATTATTCGTTTGCCGAGCCAATCGAGTATGAAGCACCTGTGGCAACCTCAACCGCAGCGATCAAGCCGCG TAAGCCCAGCCGCCGCCGCAAATCGATTGTGCCGCTGAGCGTGGCCGAAGCGATTGCTGCCAGCGTCGCCAATGATCCAG CGCCTGAGCCAGCGGTTGAAGTGGAAGCTGTAGCTGAGCCTGTCGCCGAAATCGTCAGCGAACCAATCGCAGAACCTGTG GTTGAAGCAGTGACTGAGGAAAAGCCCAAAAAGCGGGGTGGCCGCCGGAAAGCTGCCGAGCCAGTTGAAGTCGTCGAAGA AAAACCTAAGAAAACCACTCGCCGCAAAAAGGCCGAGCCAGTCGCTGAAGCTCCAGCTCCAGTCGAGCCAGCCAAAAAAC AACCACGTCGCCGTAAAAAGGCCGCCAGCGAAACTGGAGAAGAAGCATGA
Upstream 100 bases:
>100_bases CATGAGAGGCGATGCCGCCCACGCAATACATCATTCCAGCTGGTTTGATGTCGTCATTTGTCAAATTGTTTTGTCTAATT GTTGGCAGTTTTAAGTGGTA
Downstream 100 bases:
>100_bases GTTGGCCTGAACAGGCCATTAAAATCTGTGGTGTGCGTAGTGTCGAAGCCGCTGTTACAGCGGCTTTGGCAGGCGCAGAC CTAATTGGCATGATCTTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 789; Mature: 788
Protein sequence:
>789_residues MGDRTRSLARIKWHATTKMTAQEHIGIPMNKPKQDVAVFIDFENIYVSVREKFDATPNFEALMERCEDYGRVVVARAYAD WYRYPRITSALFANNIEPMYVPTYYYDKDEGRMGRPIKNSVDMHMCIDAMRTLYTRTNIGSYIFITGDRDFIALVNCVRQ EGKDVIIVGIGGAASSHLAQSADEFLFYEQIVDIRPMGGRRNERHEKTFERVERPERVERNDRSERPERPERSERPERSE RSERNGRDDRRRERERPEKNAEPTFERLDSRSEKTAEPRVEKPAEKAPEIVVRPAPSTAPVVATTPSNPDAAIYDKLVEA LHLARKRGYVTSFGSLKVLMKELLPNFKESRYRDAQGKPFTKFTDFVREAERLGKIQIFTSGTVNEVFLPDEDPYKLSQF AEDLPSVEAERELEQELELQAESIAPITIETIGIADEPMELADGEEVAPSSERGDRNGRRRRRRGSSRSEQPAVDVLPEE LSETILVPAPTEGFSFGEREWQLFYQVMGVYSEPVPFADIFNDLREMRNTAELDLTNNALKELIKQAINEGKVQRSNRGA KAHYRLVLNPEQFDGAITTFEPSDLEAFDDGPSLPDLVDEEPRLLPAMIGGQTIAIDDDYTAPIDEVALPESFEEQPLPE SDADYSFAEPIEYEAPVATSTAAIKPRKPSRRRKSIVPLSVAEAIAASVANDPAPEPAVEVEAVAEPVAEIVSEPIAEPV VEAVTEEKPKKRGGRRKAAEPVEVVEEKPKKTTRRKKAEPVAEAPAPVEPAKKQPRRRKKAASETGEEA
Sequences:
>Translated_789_residues MGDRTRSLARIKWHATTKMTAQEHIGIPMNKPKQDVAVFIDFENIYVSVREKFDATPNFEALMERCEDYGRVVVARAYAD WYRYPRITSALFANNIEPMYVPTYYYDKDEGRMGRPIKNSVDMHMCIDAMRTLYTRTNIGSYIFITGDRDFIALVNCVRQ EGKDVIIVGIGGAASSHLAQSADEFLFYEQIVDIRPMGGRRNERHEKTFERVERPERVERNDRSERPERPERSERPERSE RSERNGRDDRRRERERPEKNAEPTFERLDSRSEKTAEPRVEKPAEKAPEIVVRPAPSTAPVVATTPSNPDAAIYDKLVEA LHLARKRGYVTSFGSLKVLMKELLPNFKESRYRDAQGKPFTKFTDFVREAERLGKIQIFTSGTVNEVFLPDEDPYKLSQF AEDLPSVEAERELEQELELQAESIAPITIETIGIADEPMELADGEEVAPSSERGDRNGRRRRRRGSSRSEQPAVDVLPEE LSETILVPAPTEGFSFGEREWQLFYQVMGVYSEPVPFADIFNDLREMRNTAELDLTNNALKELIKQAINEGKVQRSNRGA KAHYRLVLNPEQFDGAITTFEPSDLEAFDDGPSLPDLVDEEPRLLPAMIGGQTIAIDDDYTAPIDEVALPESFEEQPLPE SDADYSFAEPIEYEAPVATSTAAIKPRKPSRRRKSIVPLSVAEAIAASVANDPAPEPAVEVEAVAEPVAEIVSEPIAEPV VEAVTEEKPKKRGGRRKAAEPVEVVEEKPKKTTRRKKAEPVAEAPAPVEPAKKQPRRRKKAASETGEEA >Mature_788_residues GDRTRSLARIKWHATTKMTAQEHIGIPMNKPKQDVAVFIDFENIYVSVREKFDATPNFEALMERCEDYGRVVVARAYADW YRYPRITSALFANNIEPMYVPTYYYDKDEGRMGRPIKNSVDMHMCIDAMRTLYTRTNIGSYIFITGDRDFIALVNCVRQE GKDVIIVGIGGAASSHLAQSADEFLFYEQIVDIRPMGGRRNERHEKTFERVERPERVERNDRSERPERPERSERPERSER SERNGRDDRRRERERPEKNAEPTFERLDSRSEKTAEPRVEKPAEKAPEIVVRPAPSTAPVVATTPSNPDAAIYDKLVEAL HLARKRGYVTSFGSLKVLMKELLPNFKESRYRDAQGKPFTKFTDFVREAERLGKIQIFTSGTVNEVFLPDEDPYKLSQFA EDLPSVEAERELEQELELQAESIAPITIETIGIADEPMELADGEEVAPSSERGDRNGRRRRRRGSSRSEQPAVDVLPEEL SETILVPAPTEGFSFGEREWQLFYQVMGVYSEPVPFADIFNDLREMRNTAELDLTNNALKELIKQAINEGKVQRSNRGAK AHYRLVLNPEQFDGAITTFEPSDLEAFDDGPSLPDLVDEEPRLLPAMIGGQTIAIDDDYTAPIDEVALPESFEEQPLPES DADYSFAEPIEYEAPVATSTAAIKPRKPSRRRKSIVPLSVAEAIAASVANDPAPEPAVEVEAVAEPVAEIVSEPIAEPVV EAVTEEKPKKRGGRRKAAEPVEVVEEKPKKTTRRKKAEPVAEAPAPVEPAKKQPRRRKKAASETGEEA
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89146; Mature: 89015
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDRTRSLARIKWHATTKMTAQEHIGIPMNKPKQDVAVFIDFENIYVSVREKFDATPNFE CCCCCCCHHEEEEECHHHCCHHHHCCCCCCCCCCCEEEEEEEHHHHHHHHHHCCCCCCHH ALMERCEDYGRVVVARAYADWYRYPRITSALFANNIEPMYVPTYYYDKDEGRMGRPIKNS HHHHHHHHHCCEEEEHHHHHHHHCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCHHC VDMHMCIDAMRTLYTRTNIGSYIFITGDRDFIALVNCVRQEGKDVIIVGIGGAASSHLAQ CHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH SADEFLFYEQIVDIRPMGGRRNERHEKTFERVERPERVERNDRSERPERPERSERPERSE HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHCCCCHHH RSERNGRDDRRRERERPEKNAEPTFERLDSRSEKTAEPRVEKPAEKAPEIVVRPAPSTAP HHHHCCCHHHHHHHHCCCCCCCHHHHHHHCCCHHCCCCCCCCCHHHCCCEEEECCCCCCC VVATTPSNPDAAIYDKLVEALHLARKRGYVTSFGSLKVLMKELLPNFKESRYRDAQGKPF EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCH TKFTDFVREAERLGKIQIFTSGTVNEVFLPDEDPYKLSQFAEDLPSVEAERELEQELELQ HHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH AESIAPITIETIGIADEPMELADGEEVAPSSERGDRNGRRRRRRGSSRSEQPAVDVLPEE HHHCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHCHHH LSETILVPAPTEGFSFGEREWQLFYQVMGVYSEPVPFADIFNDLREMRNTAELDLTNNAL HHCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHCCCCCHHHH KELIKQAINEGKVQRSNRGAKAHYRLVLNPEQFDGAITTFEPSDLEAFDDGPSLPDLVDE HHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHCCCEEECCCCCCCCCCCCCCCCCCCCC EPRLLPAMIGGQTIAIDDDYTAPIDEVALPESFEEQPLPESDADYSFAEPIEYEAPVATS CCCCHHHHHCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TAAIKPRKPSRRRKSIVPLSVAEAIAASVANDPAPEPAVEVEAVAEPVAEIVSEPIAEPV CCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VEAVTEEKPKKRGGRRKAAEPVEVVEEKPKKTTRRKKAEPVAEAPAPVEPAKKQPRRRKK HHHHHHHHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCHHHCHHHHHH AASETGEEA HHHCCCCCC >Mature Secondary Structure GDRTRSLARIKWHATTKMTAQEHIGIPMNKPKQDVAVFIDFENIYVSVREKFDATPNFE CCCCCCHHEEEEECHHHCCHHHHCCCCCCCCCCCEEEEEEEHHHHHHHHHHCCCCCCHH ALMERCEDYGRVVVARAYADWYRYPRITSALFANNIEPMYVPTYYYDKDEGRMGRPIKNS HHHHHHHHHCCEEEEHHHHHHHHCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCHHC VDMHMCIDAMRTLYTRTNIGSYIFITGDRDFIALVNCVRQEGKDVIIVGIGGAASSHLAQ CHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH SADEFLFYEQIVDIRPMGGRRNERHEKTFERVERPERVERNDRSERPERPERSERPERSE HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHCCCCHHH RSERNGRDDRRRERERPEKNAEPTFERLDSRSEKTAEPRVEKPAEKAPEIVVRPAPSTAP HHHHCCCHHHHHHHHCCCCCCCHHHHHHHCCCHHCCCCCCCCCHHHCCCEEEECCCCCCC VVATTPSNPDAAIYDKLVEALHLARKRGYVTSFGSLKVLMKELLPNFKESRYRDAQGKPF EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCH TKFTDFVREAERLGKIQIFTSGTVNEVFLPDEDPYKLSQFAEDLPSVEAERELEQELELQ HHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH AESIAPITIETIGIADEPMELADGEEVAPSSERGDRNGRRRRRRGSSRSEQPAVDVLPEE HHHCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHCHHH LSETILVPAPTEGFSFGEREWQLFYQVMGVYSEPVPFADIFNDLREMRNTAELDLTNNAL HHCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHCCCCCHHHH KELIKQAINEGKVQRSNRGAKAHYRLVLNPEQFDGAITTFEPSDLEAFDDGPSLPDLVDE HHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHCCCEEECCCCCCCCCCCCCCCCCCCCC EPRLLPAMIGGQTIAIDDDYTAPIDEVALPESFEEQPLPESDADYSFAEPIEYEAPVATS CCCCHHHHHCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TAAIKPRKPSRRRKSIVPLSVAEAIAASVANDPAPEPAVEVEAVAEPVAEIVSEPIAEPV CCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VEAVTEEKPKKRGGRRKAAEPVEVVEEKPKKTTRRKKAEPVAEAPAPVEPAKKQPRRRKK HHHHHHHHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCHHHCHHHHHH AASETGEEA HHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA