Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899759

Identifier: 159899759

GI number: 159899759

Start: 4101921

End: 4104290

Strand: Reverse

Name: 159899759

Synonym: Haur_3241

Alternate gene names: NA

Gene position: 4104290-4101921 (Counterclockwise)

Preceding gene: 159899765

Following gene: 159899758

Centisome position: 64.67

GC content: 53.16

Gene sequence:

>2370_bases
ATGGGTGACCGTACTCGATCACTCGCCAGAATTAAATGGCATGCCACAACCAAAATGACTGCCCAGGAGCACATTGGAAT
CCCTATGAACAAACCCAAGCAGGATGTTGCGGTTTTTATCGACTTCGAGAACATTTATGTTTCAGTTCGAGAGAAGTTCG
ACGCTACCCCTAATTTCGAAGCTTTGATGGAACGTTGCGAGGACTATGGCCGTGTTGTAGTTGCTCGCGCTTACGCCGAT
TGGTATCGTTACCCACGCATTACCAGCGCTTTGTTTGCCAATAATATCGAGCCAATGTATGTGCCAACCTACTATTATGA
TAAGGACGAAGGTCGCATGGGCCGTCCGATCAAAAATAGTGTGGATATGCACATGTGTATCGATGCAATGCGCACGCTCT
ACACACGCACCAACATTGGTTCGTATATCTTTATCACTGGCGACCGCGATTTTATCGCCTTGGTCAACTGTGTGCGCCAA
GAAGGTAAAGATGTGATTATCGTTGGCATTGGCGGGGCTGCCTCCAGCCATCTCGCTCAAAGTGCCGATGAATTTTTGTT
CTACGAGCAAATTGTCGATATTCGCCCGATGGGTGGCCGTCGCAACGAGCGCCACGAAAAAACCTTCGAGCGGGTCGAGC
GCCCTGAACGGGTTGAACGTAACGATCGTAGCGAACGCCCAGAACGCCCTGAACGCAGCGAACGCCCAGAACGGTCAGAA
CGTAGCGAACGCAATGGCCGCGATGATCGCCGCCGCGAACGCGAACGCCCTGAGAAGAATGCCGAGCCAACTTTCGAGCG
GCTTGATTCACGTTCGGAGAAAACAGCCGAACCACGGGTTGAAAAGCCCGCTGAAAAAGCTCCCGAAATTGTGGTACGGC
CAGCACCAAGCACCGCGCCAGTCGTGGCAACCACCCCCAGCAATCCCGATGCGGCAATTTATGATAAGTTGGTTGAGGCC
TTGCACTTAGCGCGGAAACGTGGCTATGTGACTTCATTTGGCTCGCTCAAGGTGCTGATGAAAGAACTGCTGCCCAACTT
CAAAGAAAGTCGCTATCGCGATGCTCAAGGCAAGCCGTTCACCAAATTTACCGATTTTGTGCGCGAAGCCGAACGACTTG
GCAAGATTCAAATCTTCACCAGCGGCACAGTTAACGAAGTCTTCTTGCCCGATGAAGATCCTTACAAGCTTTCGCAATTT
GCTGAAGATTTGCCCTCAGTTGAGGCCGAACGCGAACTCGAACAAGAGCTTGAGTTGCAAGCCGAATCGATCGCCCCAAT
CACGATTGAAACAATTGGCATCGCCGATGAGCCGATGGAATTGGCCGATGGCGAAGAAGTTGCCCCAAGCAGCGAACGTG
GCGACCGCAATGGCCGTCGTCGCCGCCGCCGTGGCAGCAGCCGCAGCGAACAACCAGCCGTCGATGTGCTGCCCGAAGAG
TTGAGCGAAACAATCCTTGTACCAGCACCAACCGAAGGTTTCAGCTTTGGCGAACGTGAATGGCAGTTGTTCTATCAGGT
GATGGGCGTGTATAGCGAGCCAGTGCCATTCGCCGATATCTTTAACGATCTTCGCGAAATGCGCAACACGGCTGAGCTTG
ATCTGACCAATAATGCCTTGAAGGAATTGATCAAACAAGCGATCAACGAAGGCAAAGTCCAGCGCTCAAATCGTGGAGCC
AAAGCCCACTATCGCTTGGTGCTCAACCCTGAGCAGTTTGATGGTGCAATAACAACCTTCGAGCCAAGCGATCTTGAAGC
CTTTGATGATGGCCCAAGCTTGCCTGACCTGGTTGATGAAGAACCACGTTTGTTGCCAGCCATGATCGGTGGCCAAACCA
TCGCGATTGACGATGATTACACTGCGCCAATCGATGAAGTGGCCTTGCCCGAAAGCTTTGAAGAACAGCCGTTGCCTGAA
AGTGATGCCGATTATTCGTTTGCCGAGCCAATCGAGTATGAAGCACCTGTGGCAACCTCAACCGCAGCGATCAAGCCGCG
TAAGCCCAGCCGCCGCCGCAAATCGATTGTGCCGCTGAGCGTGGCCGAAGCGATTGCTGCCAGCGTCGCCAATGATCCAG
CGCCTGAGCCAGCGGTTGAAGTGGAAGCTGTAGCTGAGCCTGTCGCCGAAATCGTCAGCGAACCAATCGCAGAACCTGTG
GTTGAAGCAGTGACTGAGGAAAAGCCCAAAAAGCGGGGTGGCCGCCGGAAAGCTGCCGAGCCAGTTGAAGTCGTCGAAGA
AAAACCTAAGAAAACCACTCGCCGCAAAAAGGCCGAGCCAGTCGCTGAAGCTCCAGCTCCAGTCGAGCCAGCCAAAAAAC
AACCACGTCGCCGTAAAAAGGCCGCCAGCGAAACTGGAGAAGAAGCATGA

Upstream 100 bases:

>100_bases
CATGAGAGGCGATGCCGCCCACGCAATACATCATTCCAGCTGGTTTGATGTCGTCATTTGTCAAATTGTTTTGTCTAATT
GTTGGCAGTTTTAAGTGGTA

Downstream 100 bases:

>100_bases
GTTGGCCTGAACAGGCCATTAAAATCTGTGGTGTGCGTAGTGTCGAAGCCGCTGTTACAGCGGCTTTGGCAGGCGCAGAC
CTAATTGGCATGATCTTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 789; Mature: 788

Protein sequence:

>789_residues
MGDRTRSLARIKWHATTKMTAQEHIGIPMNKPKQDVAVFIDFENIYVSVREKFDATPNFEALMERCEDYGRVVVARAYAD
WYRYPRITSALFANNIEPMYVPTYYYDKDEGRMGRPIKNSVDMHMCIDAMRTLYTRTNIGSYIFITGDRDFIALVNCVRQ
EGKDVIIVGIGGAASSHLAQSADEFLFYEQIVDIRPMGGRRNERHEKTFERVERPERVERNDRSERPERPERSERPERSE
RSERNGRDDRRRERERPEKNAEPTFERLDSRSEKTAEPRVEKPAEKAPEIVVRPAPSTAPVVATTPSNPDAAIYDKLVEA
LHLARKRGYVTSFGSLKVLMKELLPNFKESRYRDAQGKPFTKFTDFVREAERLGKIQIFTSGTVNEVFLPDEDPYKLSQF
AEDLPSVEAERELEQELELQAESIAPITIETIGIADEPMELADGEEVAPSSERGDRNGRRRRRRGSSRSEQPAVDVLPEE
LSETILVPAPTEGFSFGEREWQLFYQVMGVYSEPVPFADIFNDLREMRNTAELDLTNNALKELIKQAINEGKVQRSNRGA
KAHYRLVLNPEQFDGAITTFEPSDLEAFDDGPSLPDLVDEEPRLLPAMIGGQTIAIDDDYTAPIDEVALPESFEEQPLPE
SDADYSFAEPIEYEAPVATSTAAIKPRKPSRRRKSIVPLSVAEAIAASVANDPAPEPAVEVEAVAEPVAEIVSEPIAEPV
VEAVTEEKPKKRGGRRKAAEPVEVVEEKPKKTTRRKKAEPVAEAPAPVEPAKKQPRRRKKAASETGEEA

Sequences:

>Translated_789_residues
MGDRTRSLARIKWHATTKMTAQEHIGIPMNKPKQDVAVFIDFENIYVSVREKFDATPNFEALMERCEDYGRVVVARAYAD
WYRYPRITSALFANNIEPMYVPTYYYDKDEGRMGRPIKNSVDMHMCIDAMRTLYTRTNIGSYIFITGDRDFIALVNCVRQ
EGKDVIIVGIGGAASSHLAQSADEFLFYEQIVDIRPMGGRRNERHEKTFERVERPERVERNDRSERPERPERSERPERSE
RSERNGRDDRRRERERPEKNAEPTFERLDSRSEKTAEPRVEKPAEKAPEIVVRPAPSTAPVVATTPSNPDAAIYDKLVEA
LHLARKRGYVTSFGSLKVLMKELLPNFKESRYRDAQGKPFTKFTDFVREAERLGKIQIFTSGTVNEVFLPDEDPYKLSQF
AEDLPSVEAERELEQELELQAESIAPITIETIGIADEPMELADGEEVAPSSERGDRNGRRRRRRGSSRSEQPAVDVLPEE
LSETILVPAPTEGFSFGEREWQLFYQVMGVYSEPVPFADIFNDLREMRNTAELDLTNNALKELIKQAINEGKVQRSNRGA
KAHYRLVLNPEQFDGAITTFEPSDLEAFDDGPSLPDLVDEEPRLLPAMIGGQTIAIDDDYTAPIDEVALPESFEEQPLPE
SDADYSFAEPIEYEAPVATSTAAIKPRKPSRRRKSIVPLSVAEAIAASVANDPAPEPAVEVEAVAEPVAEIVSEPIAEPV
VEAVTEEKPKKRGGRRKAAEPVEVVEEKPKKTTRRKKAEPVAEAPAPVEPAKKQPRRRKKAASETGEEA
>Mature_788_residues
GDRTRSLARIKWHATTKMTAQEHIGIPMNKPKQDVAVFIDFENIYVSVREKFDATPNFEALMERCEDYGRVVVARAYADW
YRYPRITSALFANNIEPMYVPTYYYDKDEGRMGRPIKNSVDMHMCIDAMRTLYTRTNIGSYIFITGDRDFIALVNCVRQE
GKDVIIVGIGGAASSHLAQSADEFLFYEQIVDIRPMGGRRNERHEKTFERVERPERVERNDRSERPERPERSERPERSER
SERNGRDDRRRERERPEKNAEPTFERLDSRSEKTAEPRVEKPAEKAPEIVVRPAPSTAPVVATTPSNPDAAIYDKLVEAL
HLARKRGYVTSFGSLKVLMKELLPNFKESRYRDAQGKPFTKFTDFVREAERLGKIQIFTSGTVNEVFLPDEDPYKLSQFA
EDLPSVEAERELEQELELQAESIAPITIETIGIADEPMELADGEEVAPSSERGDRNGRRRRRRGSSRSEQPAVDVLPEEL
SETILVPAPTEGFSFGEREWQLFYQVMGVYSEPVPFADIFNDLREMRNTAELDLTNNALKELIKQAINEGKVQRSNRGAK
AHYRLVLNPEQFDGAITTFEPSDLEAFDDGPSLPDLVDEEPRLLPAMIGGQTIAIDDDYTAPIDEVALPESFEEQPLPES
DADYSFAEPIEYEAPVATSTAAIKPRKPSRRRKSIVPLSVAEAIAASVANDPAPEPAVEVEAVAEPVAEIVSEPIAEPVV
EAVTEEKPKKRGGRRKAAEPVEVVEEKPKKTTRRKKAEPVAEAPAPVEPAKKQPRRRKKAASETGEEA

Specific function: Unknown

COG id: COG1432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 89146; Mature: 89015

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDRTRSLARIKWHATTKMTAQEHIGIPMNKPKQDVAVFIDFENIYVSVREKFDATPNFE
CCCCCCCHHEEEEECHHHCCHHHHCCCCCCCCCCCEEEEEEEHHHHHHHHHHCCCCCCHH
ALMERCEDYGRVVVARAYADWYRYPRITSALFANNIEPMYVPTYYYDKDEGRMGRPIKNS
HHHHHHHHHCCEEEEHHHHHHHHCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCHHC
VDMHMCIDAMRTLYTRTNIGSYIFITGDRDFIALVNCVRQEGKDVIIVGIGGAASSHLAQ
CHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH
SADEFLFYEQIVDIRPMGGRRNERHEKTFERVERPERVERNDRSERPERPERSERPERSE
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHCCCCHHH
RSERNGRDDRRRERERPEKNAEPTFERLDSRSEKTAEPRVEKPAEKAPEIVVRPAPSTAP
HHHHCCCHHHHHHHHCCCCCCCHHHHHHHCCCHHCCCCCCCCCHHHCCCEEEECCCCCCC
VVATTPSNPDAAIYDKLVEALHLARKRGYVTSFGSLKVLMKELLPNFKESRYRDAQGKPF
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCH
TKFTDFVREAERLGKIQIFTSGTVNEVFLPDEDPYKLSQFAEDLPSVEAERELEQELELQ
HHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
AESIAPITIETIGIADEPMELADGEEVAPSSERGDRNGRRRRRRGSSRSEQPAVDVLPEE
HHHCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHCHHH
LSETILVPAPTEGFSFGEREWQLFYQVMGVYSEPVPFADIFNDLREMRNTAELDLTNNAL
HHCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHCCCCCHHHH
KELIKQAINEGKVQRSNRGAKAHYRLVLNPEQFDGAITTFEPSDLEAFDDGPSLPDLVDE
HHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHCCCEEECCCCCCCCCCCCCCCCCCCCC
EPRLLPAMIGGQTIAIDDDYTAPIDEVALPESFEEQPLPESDADYSFAEPIEYEAPVATS
CCCCHHHHHCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TAAIKPRKPSRRRKSIVPLSVAEAIAASVANDPAPEPAVEVEAVAEPVAEIVSEPIAEPV
CCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VEAVTEEKPKKRGGRRKAAEPVEVVEEKPKKTTRRKKAEPVAEAPAPVEPAKKQPRRRKK
HHHHHHHHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCHHHCHHHHHH
AASETGEEA
HHHCCCCCC
>Mature Secondary Structure 
GDRTRSLARIKWHATTKMTAQEHIGIPMNKPKQDVAVFIDFENIYVSVREKFDATPNFE
CCCCCCHHEEEEECHHHCCHHHHCCCCCCCCCCCEEEEEEEHHHHHHHHHHCCCCCCHH
ALMERCEDYGRVVVARAYADWYRYPRITSALFANNIEPMYVPTYYYDKDEGRMGRPIKNS
HHHHHHHHHCCEEEEHHHHHHHHCHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCHHC
VDMHMCIDAMRTLYTRTNIGSYIFITGDRDFIALVNCVRQEGKDVIIVGIGGAASSHLAQ
CHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHH
SADEFLFYEQIVDIRPMGGRRNERHEKTFERVERPERVERNDRSERPERPERSERPERSE
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHCCCCHHH
RSERNGRDDRRRERERPEKNAEPTFERLDSRSEKTAEPRVEKPAEKAPEIVVRPAPSTAP
HHHHCCCHHHHHHHHCCCCCCCHHHHHHHCCCHHCCCCCCCCCHHHCCCEEEECCCCCCC
VVATTPSNPDAAIYDKLVEALHLARKRGYVTSFGSLKVLMKELLPNFKESRYRDAQGKPF
EEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCH
TKFTDFVREAERLGKIQIFTSGTVNEVFLPDEDPYKLSQFAEDLPSVEAERELEQELELQ
HHHHHHHHHHHHCCCEEEEECCCCCEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHH
AESIAPITIETIGIADEPMELADGEEVAPSSERGDRNGRRRRRRGSSRSEQPAVDVLPEE
HHHCCCEEEEEECCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHHCHHH
LSETILVPAPTEGFSFGEREWQLFYQVMGVYSEPVPFADIFNDLREMRNTAELDLTNNAL
HHCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHCCCCCHHHH
KELIKQAINEGKVQRSNRGAKAHYRLVLNPEQFDGAITTFEPSDLEAFDDGPSLPDLVDE
HHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHCCCEEECCCCCCCCCCCCCCCCCCCCC
EPRLLPAMIGGQTIAIDDDYTAPIDEVALPESFEEQPLPESDADYSFAEPIEYEAPVATS
CCCCHHHHHCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TAAIKPRKPSRRRKSIVPLSVAEAIAASVANDPAPEPAVEVEAVAEPVAEIVSEPIAEPV
CCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
VEAVTEEKPKKRGGRRKAAEPVEVVEEKPKKTTRRKKAEPVAEAPAPVEPAKKQPRRRKK
HHHHHHHHHHHHCCCCCCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCHHHCHHHHHH
AASETGEEA
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA