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The map label for this gene is secF [H]

Identifier: 159899622

GI number: 159899622

Start: 3914930

End: 3915898

Strand: Reverse

Name: secF [H]

Synonym: Haur_3103

Alternate gene names: 159899622

Gene position: 3915898-3914930 (Counterclockwise)

Preceding gene: 159899623

Following gene: 159899620

Centisome position: 61.7

GC content: 50.77

Gene sequence:

>969_bases
ATGTTAGATTTAGTGCGTCGGCGCTATTTATGGTTTGCAATTTCAATCCTGACAATTATTCCAGGCTTGATTAGCATGCT
GGTATTTGGTTTGAACCTTGGGGTGGACTTCTCGGGTGGCGCTCGCTGGGAAATTCATATCCCAAGCATTAGCGAAACCC
GCGATGGCTTAGAAAATGATGTCAATGCGGTGTTTGCTGAAAGCGGCATCGAAGGTGCACGGACTCAGCTATCACAAGGT
ACGACCAACAATCAACAATTTGTGATCGCCTTTGTGCGCTCAAAGTCGGTGCAAAGCGATTCGGCTGAGCGTAAAGCAGT
AGAAACTGGCTTGACCAGCAAGTTTGGTGCTGATACGCGGATCGAAACAGTGCAAACCGTCGGTGAAACCGTGCGTGGGC
GCTCAATTCGCAATGCGATCGTAGCTGTCTTTATTGCCTCATTGGCGATCATGGGCTATTTATGGGCGGCCTTCCGTGGC
ACTCCCAACCCCATTCGCTACGGCGTGTGTGCAATCATCGCGATGTTGCACGACGTGTTGGTGGTGATCGGGATGGCTTC
AATTCTCGGCTGGTTAATTGGCCTTGAAGTTGATGCGCTGTTTATGACCGCCGTCTTGACCGTGATTAGCTTCTCGGTCC
ACGATACGATTGTGGTGTTCGACCGCGTGCGCGAAAACGTGCGCCGCTCAAGCGACGATTACGAACGGGTGGTCAACCGC
TCGATCGTTCAAACCTTGACGCGTTCGATCAACACCCAATTTACCTCGTTCTTTACCTTGACCGCCTTGTTGTTGTTTGG
TGGCGAAAGCATTCGCTCGTTTGTTTTGATTCTGTTGCTTGGTTTGATCAGCGGTACCTATTCGTCAATTTTCAACGCTG
CCCAATTGTTGGTGGTGTGGGAAAACCGCGAATGGCGCAACTGGTTTGGTCGTGGCAAAGATAAGGTTAAGCCAGCCACC
GCTGCCTAA

Upstream 100 bases:

>100_bases
GGTTAACCCCGAAGAAGATGCTGCTGAAGTGGCAGCCTTATCGTCAGAGCAAGCTTAATTTAGTTGATTTTCAACTATAC
CATCGATAAAGGATTGGGCT

Downstream 100 bases:

>100_bases
ATTGATCCTGCCCATCGCAGATCCAAAAATGCCCCGCTCGTTGCTACGAGCGGGGTTTTCTGTTATATGATGTTAGGCTA
TCGGAATAGTCAGCAGGAAG

Product: protein-export membrane protein SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MLDLVRRRYLWFAISILTIIPGLISMLVFGLNLGVDFSGGARWEIHIPSISETRDGLENDVNAVFAESGIEGARTQLSQG
TTNNQQFVIAFVRSKSVQSDSAERKAVETGLTSKFGADTRIETVQTVGETVRGRSIRNAIVAVFIASLAIMGYLWAAFRG
TPNPIRYGVCAIIAMLHDVLVVIGMASILGWLIGLEVDALFMTAVLTVISFSVHDTIVVFDRVRENVRRSSDDYERVVNR
SIVQTLTRSINTQFTSFFTLTALLLFGGESIRSFVLILLLGLISGTYSSIFNAAQLLVVWENREWRNWFGRGKDKVKPAT
AA

Sequences:

>Translated_322_residues
MLDLVRRRYLWFAISILTIIPGLISMLVFGLNLGVDFSGGARWEIHIPSISETRDGLENDVNAVFAESGIEGARTQLSQG
TTNNQQFVIAFVRSKSVQSDSAERKAVETGLTSKFGADTRIETVQTVGETVRGRSIRNAIVAVFIASLAIMGYLWAAFRG
TPNPIRYGVCAIIAMLHDVLVVIGMASILGWLIGLEVDALFMTAVLTVISFSVHDTIVVFDRVRENVRRSSDDYERVVNR
SIVQTLTRSINTQFTSFFTLTALLLFGGESIRSFVLILLLGLISGTYSSIFNAAQLLVVWENREWRNWFGRGKDKVKPAT
AA
>Mature_322_residues
MLDLVRRRYLWFAISILTIIPGLISMLVFGLNLGVDFSGGARWEIHIPSISETRDGLENDVNAVFAESGIEGARTQLSQG
TTNNQQFVIAFVRSKSVQSDSAERKAVETGLTSKFGADTRIETVQTVGETVRGRSIRNAIVAVFIASLAIMGYLWAAFRG
TPNPIRYGVCAIIAMLHDVLVVIGMASILGWLIGLEVDALFMTAVLTVISFSVHDTIVVFDRVRENVRRSSDDYERVVNR
SIVQTLTRSINTQFTSFFTLTALLLFGGESIRSFVLILLLGLISGTYSSIFNAAQLLVVWENREWRNWFGRGKDKVKPAT
AA

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=304, Percent_Identity=31.9078947368421, Blast_Score=110, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 35590; Mature: 35590

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLVRRRYLWFAISILTIIPGLISMLVFGLNLGVDFSGGARWEIHIPSISETRDGLEND
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCEEEEECCCCHHHHHHHHHH
VNAVFAESGIEGARTQLSQGTTNNQQFVIAFVRSKSVQSDSAERKAVETGLTSKFGADTR
HHHHHHHCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCHHCCCCHH
IETVQTVGETVRGRSIRNAIVAVFIASLAIMGYLWAAFRGTPNPIRYGVCAIIAMLHDVL
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VVIGMASILGWLIGLEVDALFMTAVLTVISFSVHDTIVVFDRVRENVRRSSDDYERVVNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
SIVQTLTRSINTQFTSFFTLTALLLFGGESIRSFVLILLLGLISGTYSSIFNAAQLLVVW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
ENREWRNWFGRGKDKVKPATAA
CCCCHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MLDLVRRRYLWFAISILTIIPGLISMLVFGLNLGVDFSGGARWEIHIPSISETRDGLEND
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCEEEEECCCCHHHHHHHHHH
VNAVFAESGIEGARTQLSQGTTNNQQFVIAFVRSKSVQSDSAERKAVETGLTSKFGADTR
HHHHHHHCCCCHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCHHCCCCHH
IETVQTVGETVRGRSIRNAIVAVFIASLAIMGYLWAAFRGTPNPIRYGVCAIIAMLHDVL
HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
VVIGMASILGWLIGLEVDALFMTAVLTVISFSVHDTIVVFDRVRENVRRSSDDYERVVNR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
SIVQTLTRSINTQFTSFFTLTALLLFGGESIRSFVLILLLGLISGTYSSIFNAAQLLVVW
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE
ENREWRNWFGRGKDKVKPATAA
CCCCHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]